KLF1

General Information

Gene Name       : KLF1
Gene ID             : ENSG00000105610.5
Essential Gene : Yes

Functions

Localization

Domains (AlphaFold: KLF1)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878KLF1ENSG00000105610.50.000.000.00ENCSR000AEF
HepG2KLF1ENSG00000105610.50.000.020.01ENCSR985KAT
K562KLF1ENSG00000105610.555.2725.5840.42ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for KLF1 is not avaliable on ENCORE database.



Proteins bound to RNA
  • KLF1 RNA is bound by 6 proteins.  







eCLIP assay for KLF1 is not avaliable on ENCORE database.





6 proteins are bound to KLF1 RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr191299549412995538-3'-UTR,intron-Distal3.192055.06674K562DDX6
chr191299556012995596-3'-UTR,intron-Distal4.674165.89791K562RBM15
chr191299565812995724-3'-UTR,CDS,intron-Distal5.3139117.32805K562RBM15
chr191299554512995558-3'-UTR,intron-Distal3.185743.53942K562PABPC4
chr191299536412995417-3'-UTR,intron-Distal3.339647.38271K562YBX3
chr191299532912995368-3'-UTR,intron-Distal4.711239.84602K562PABPC4
chr191299544512995502-3'-UTR,intron-Distal5.1108446.04564K562PABPC4
chr191299550212995545-3'-UTR,intron-Distal4.8793139.13708K562PABPC4
chr191299791812997989-5'-UTR,CDS,intron-Distal3.6498714.44080K562DDX3X
chr191299787412997918-CDS,intron-Distal3.145156.60237K562DDX3X
chr191299577212995802-CDS,intron-Distal3.235343.86052K562YBX3
chr191299627112996330-CDS,intron-Distal4.7898310.75112K562RBM15
chr191299690512996952-CDS,intron-Distal3.884865.23852K562DDX3X
chr191299583712995899-CDS,intron-Distal6.0374140.02100K562AQR
chr191299692912996978-CDS,intron-Distal,intron-Proximal3.6095810.89589K562AQR
chr191299584212995874-CDS,intron-Distal3.165565.41108K562RBM15
chr191299647612996504-CDS,intron-Distal4.893706.54449K562RBM15
chr191299608512996124-intron-Distal,intron-Proximal6.6033161.78930K562AQR
chr191299602812996085-intron-Distal,intron-Proximal6.3448731.51190K562AQR
chr191299779012997868-intron-Distal4.8923419.77203K562AQR
chr191299587412995883-intron-Distal3.490023.34231K562RBM15
chr191299612412996131-intron-Distal,intron-Proximal5.9899436.23702K562AQR
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for KLF1 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for KLF1 is not available on ENCORE database.

  • 64 RBPs can affect the levels of KLF1.  








The Knockdown/knockout RNA-Seq assay for KLF1 is not available on ENCORE database.





64 RBPs can affect the gene expression of KLF1 :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
KLF1ENSG00000105610.41136.83810623.007800.867604.156602.03380K562ADAR
KLF1ENSG00000105610.4780.369301166.86950-0.580405.817105.04270K562AGGF1
KLF1ENSG00000105610.41507.235401214.202500.311802.651202.01090K562AKAP8L
KLF1ENSG00000105610.43033.294202157.268000.491605.882403.96540K562APOBEC3C
KLF1ENSG00000105610.41285.92290999.647900.363203.394101.90870K562BCCIP
KLF1ENSG00000105610.41648.36850966.094700.770708.134606.45700K562BCLAF1
KLF1ENSG00000105610.4934.45470610.082600.615003.401002.20690K562CCAR1
KLF1ENSG00000105610.41773.922301394.401800.347203.984502.53400K562CCDC124
KLF1ENSG00000105610.41580.107701136.232500.475702.280801.33400K562CNOT7
KLF1ENSG00000105610.42179.075201731.356200.331704.230802.84150K562CPEB4
KLF1ENSG00000105610.41371.62180732.927000.904003.598002.36900K562CSTF2
KLF1ENSG00000105610.42676.179202003.384800.417606.259104.40670K562DDX21
KLF1ENSG00000105610.41051.39130846.969500.311802.639201.35020K562DDX27
KLF1ENSG00000105610.42551.170201791.651300.5098011.044009.83950K562DDX47
KLF1ENSG00000105610.41104.50740683.011800.693303.114401.70190K562DHX30
KLF1ENSG00000105610.4890.491101306.43130-0.553005.722504.40670K562DKC1
KLF1ENSG00000105610.41799.76760892.324201.012106.004004.11330K562EEF2
KLF1ENSG00000105610.4895.550601821.90340-1.0246030.1944028.28230K562EIF2S2
KLF1ENSG00000105610.41389.55360922.528100.590904.524803.16270K562EIF3D
KLF1ENSG00000105610.4714.35790457.539300.642707.749006.42030K562EIF3G
KLF1ENSG00000105610.41338.40480965.587000.470906.300204.42850K562EIF4B
KLF1ENSG00000105610.43384.965302444.934400.469206.836505.38240K562EIF4G2
KLF1ENSG00000105610.42085.239401219.521500.7738012.4332010.51750K562FIP1L1
KLF1ENSG00000105610.4733.490001011.53950-0.463704.312802.04640K562FUBP3
KLF1ENSG00000105610.4274.43580404.52570-0.559803.626402.05770K562FUS
KLF1ENSG00000105610.4136.45130374.95790-1.458304.533003.58030K562G3BP2
KLF1ENSG00000105610.42120.733101693.285200.324603.896902.54930K562GLRX3
KLF1ENSG00000105610.41195.15590848.193000.494604.887803.83510K562GPKOW
KLF1ENSG00000105610.43795.127602427.870300.6444011.7305010.14880K562GRSF1
KLF1ENSG00000105610.41179.23980810.150600.541504.150203.43410K562HNRNPC
KLF1ENSG00000105610.42890.187002043.679300.499904.010902.92720K562HNRNPU
KLF1ENSG00000105610.41204.535801653.30350-0.456904.211803.23630K562HSPD1
KLF1ENSG00000105610.4841.23240624.850800.428903.497402.11850K562IGF2BP3
KLF1ENSG00000105610.4941.96040637.418700.563304.898202.93020K562ILF3
KLF1ENSG00000105610.4950.14770615.935300.625305.986203.81110K562KHDRBS1
KLF1ENSG00000105610.41038.98650645.482300.686608.723007.18790K562MAGOH
KLF1ENSG00000105610.41112.40200644.134100.788105.827404.41610K562MATR3
KLF1ENSG00000105610.4557.263401011.76150-0.860407.440205.72380K562NAA15
KLF1ENSG00000105610.4558.617501070.69960-0.9386016.4223013.70990K562NCBP2
KLF1ENSG00000105610.41375.84690850.174900.694402.813701.50510K562NONO
KLF1ENSG00000105610.42753.869901978.057600.4773014.7802013.24610K562NSUN2
KLF1ENSG00000105610.42084.550401384.509900.590306.083204.78720K562PPIG
KLF1ENSG00000105610.42139.054202837.93040-0.407906.379604.70490K562PUM1
KLF1ENSG00000105610.4527.603501203.99900-1.1903017.7274016.39110K562PUS1
KLF1ENSG00000105610.4154.20240357.65730-1.213805.164703.13390K562RAVER1
KLF1ENSG00000105610.41094.47300650.855200.749705.119202.40430K562RBFOX2
KLF1ENSG00000105610.41475.581201173.245500.330703.466502.81490K562RBM15
KLF1ENSG00000105610.4951.33780601.218600.662007.348905.89250K562RBM22
KLF1ENSG00000105610.42113.318801549.665900.447503.373901.31900K562SAFB2
KLF1ENSG00000105610.41743.520001160.286800.587407.924906.12950K562SAFB
KLF1ENSG00000105610.41809.142801035.112900.805405.961303.60390K562SBDS
KLF1ENSG00000105610.4259.15020809.57040-1.643409.732007.07160K562SF1
KLF1ENSG00000105610.4958.33900671.900300.512204.594802.92740K562SLBP
KLF1ENSG00000105610.4962.67700504.636500.931706.006104.34810K562SRSF4
KLF1ENSG00000105610.41321.03550811.660600.702606.734705.09440K562SUPV3L1
KLF1ENSG00000105610.41734.56930622.196901.4790028.3211025.56280K562TARDBP
KLF1ENSG00000105610.41042.19960600.195300.7960011.780009.98080K562TIA1
KLF1ENSG00000105610.4888.26180589.115800.592305.774004.06280K562TRA2A
KLF1ENSG00000105610.41079.49060742.770100.539302.564301.66040K562TRIM56
KLF1ENSG00000105610.43092.333402682.893900.204802.539001.32890K562TROVE2
KLF1ENSG00000105610.41643.228602097.37450-0.352105.660404.67310K562UPF1
KLF1ENSG00000105610.42156.626401866.217000.208602.512901.70410K562WDR43
KLF1ENSG00000105610.4499.87460946.83670-0.921504.638802.37240K562XPO5
KLF1ENSG00000105610.43639.795302528.394500.525505.555504.26360K562ZC3H8
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for KLF1 is not available on ENCORE database.






No RBPs affect the alternative splcing events of KLF1 on ENCORE database.





The Knockdown/knockout RNA-Seq assay for KLF1 is not avaliable on ENCORE database.