HIST3H2A

General Information

Gene Name       : HIST3H2A
Gene ID             : ENSG00000181218.5
Essential Gene : No

Functions

Localization

Domains (AlphaFold: HIST3H2A)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878HIST3H2AENSG00000181218.51.013.312.16ENCSR000AEF
HepG2HIST3H2AENSG00000181218.50.140.000.07ENCSR985KAT
K562HIST3H2AENSG00000181218.527.4018.6323.02ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for HIST3H2A is not avaliable on ENCORE database.



Proteins bound to RNA
  • HIST3H2A RNA is bound by 10 proteins.  







eCLIP assay for HIST3H2A is not avaliable on ENCORE database.





10 proteins are bound to HIST3H2A RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr1228645066228645104-3'-UTR7.75617400.00000K562SLBP
chr1228645104228645146-3'-UTR,CDS6.3099276.12655K562SLBP
chr1228645488228645522-5'-UTR,CDS4.267634.70436K562RBM15
chr1228645538228645553-5'-UTR5.351328.17820K562NOLC1
chr1228645510228645538-5'-UTR,CDS4.4817816.08665K562NOLC1
chr1228645471228645554-5'-UTR,CDS5.4476772.39557HepG2SUB1
chr1228645493228645539-5'-UTR,CDS3.354975.45129K562GEMIN5
chr1228645477228645537-5'-UTR,CDS4.563085.13128K562EIF3G
chr1228645292228645351-CDS4.178367.07351K562SND1
chr1228645184228645236-CDS3.7102826.44642K562YBX3
chr1228645173228645237-CDS3.575127.55422K562METAP2
chr1228645490228645510-CDS3.800129.47792K562NOLC1
chr1228645300228645341-CDS3.448363.63681K562RBM15
chr1228645407228645451-CDS5.0225127.42096K562RPS3
chr1228645248228645276-CDS3.317059.72633K562YBX3
chr1228645159228645178-CDS3.6058814.22452K562YBX3
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for HIST3H2A is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for HIST3H2A is not available on ENCORE database.

  • 58 RBPs can affect the levels of HIST3H2A.  








The Knockdown/knockout RNA-Seq assay for HIST3H2A is not available on ENCORE database.





58 RBPs can affect the gene expression of HIST3H2A :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
HIST3H2AENSG00000181218.4644.61080199.415401.6926032.0901030.24610K562AGGF1
HIST3H2AENSG00000181218.4297.62900148.914600.998909.640106.91120K562AKAP1
HIST3H2AENSG00000181218.4491.55130219.186101.165109.958807.80120K562AKAP8
HIST3H2AENSG00000181218.4675.08850207.515201.7018012.3934010.87160K562AKAP8L
HIST3H2AENSG00000181218.4428.72350217.760700.977205.777204.39950K562ATP5C1
HIST3H2AENSG00000181218.475.5180016.052802.233904.849803.02960K562BCCIP
HIST3H2AENSG00000181218.4174.6241015.519303.4920028.8819025.98160K562BCLAF1
HIST3H2AENSG00000181218.4132.4202036.242201.869304.641803.20140K562CCAR1
HIST3H2AENSG00000181218.4179.8311080.415101.161004.286902.42190K562CKAP4
HIST3H2AENSG00000181218.4220.6228011.773704.227802.997201.89390K562CSTF2
HIST3H2AENSG00000181218.4248.02690109.913801.174005.428503.68930K562DDX21
HIST3H2AENSG00000181218.446.5033013.597201.773904.255002.59500K562DDX27
HIST3H2AENSG00000181218.4225.38180153.011400.558602.961401.59230K562DDX6
HIST3H2AENSG00000181218.475.0142014.389102.382107.761806.16330K562EFTUD2
HIST3H2AENSG00000181218.4158.8224049.061101.694707.118504.23060K562EIF3H
HIST3H2AENSG00000181218.4207.01570142.008000.543702.452601.38650K562EIF4B
HIST3H2AENSG00000181218.4109.2425053.339001.034203.904702.36010K562EXOSC5
HIST3H2AENSG00000181218.4104.6017041.856801.321305.268704.07250K562FIP1L1
HIST3H2AENSG00000181218.457.40270148.75660-1.373803.626201.55200K562FUBP3
HIST3H2AENSG00000181218.437.63570163.97940-2.1233013.7948012.54800K562FXR1
HIST3H2AENSG00000181218.472.8648033.789501.108502.787901.99080K562GPKOW
HIST3H2AENSG00000181218.4185.8397053.887401.785903.189002.37990K562GRSF1
HIST3H2AENSG00000181218.4128.4092046.621301.461602.053801.52870K562HNRNPC
HIST3H2AENSG00000181218.4500.20780141.337001.8233026.7381024.21840K562HNRNPU
HIST3H2AENSG00000181218.4165.2545021.205102.962102.207501.32130K562IGF2BP2
HIST3H2AENSG00000181218.449.5550021.582501.199102.453601.35060K562IGF2BP3
HIST3H2AENSG00000181218.4338.14160220.174900.618902.261201.52500K562KIF1C
HIST3H2AENSG00000181218.495.4023022.320302.095609.756008.11640K562MAGOH
HIST3H2AENSG00000181218.4414.82620210.802600.976504.780103.24930K562MAK16
HIST3H2AENSG00000181218.462.7810022.280301.494502.426301.56920K562MATR3
HIST3H2AENSG00000181218.492.8455032.981701.493105.361604.11640K562METAP2
HIST3H2AENSG00000181218.453.33740157.43350-1.561504.730403.11950K562NCBP2
HIST3H2AENSG00000181218.453.9714014.210101.925204.334502.61480K562NONO
HIST3H2AENSG00000181218.4440.84610203.422601.115706.266405.20520K562NSUN2
HIST3H2AENSG00000181218.4417.75150177.402401.235504.494603.14880K562PABPN1
HIST3H2AENSG00000181218.447.6489013.640701.804403.624901.50130K562PES1
HIST3H2AENSG00000181218.4158.0649047.521801.733807.055105.63150K562PPIG
HIST3H2AENSG00000181218.452.4077014.002601.904003.852802.96820K562PRPF8
HIST3H2AENSG00000181218.448.3614021.683001.157202.505801.86960K562PTBP1
HIST3H2AENSG00000181218.446.21290174.45850-1.916502.510501.49740K562PUM1
HIST3H2AENSG00000181218.4378.05070205.694800.878002.232001.73350K562PUS1
HIST3H2AENSG00000181218.4475.58750200.504201.246007.400806.46230K562RBM15
HIST3H2AENSG00000181218.459.0931020.810301.505604.185003.12630K562RBM22
HIST3H2AENSG00000181218.4107.79980200.74000-0.897005.097904.01600K562SF3A3
HIST3H2AENSG00000181218.4102.2184039.883701.357703.016301.69310K562SLBP
HIST3H2AENSG00000181218.460.2927013.995102.107005.601803.17960K562SRP68
HIST3H2AENSG00000181218.4101.9092021.252702.261506.313405.25690K562SRSF1
HIST3H2AENSG00000181218.4233.5622056.750702.0410015.7782013.12560K562SRSF4
HIST3H2AENSG00000181218.4103.6053020.062002.3685012.256009.88830K562SRSF5
HIST3H2AENSG00000181218.459.8663013.540502.144405.383603.92690K562SUPV3L1
HIST3H2AENSG00000181218.416.2373052.20080-1.684803.411002.50010K562SYNCRIP
HIST3H2AENSG00000181218.4147.8559021.517502.7805019.6880017.47080K562TARDBP
HIST3H2AENSG00000181218.4132.6367020.753802.6759016.9848014.81520K562TIA1
HIST3H2AENSG00000181218.497.7539048.940600.998003.110901.62310K562TRIP6
HIST3H2AENSG00000181218.476.2300014.339502.410307.891406.09930K562UCHL5
HIST3H2AENSG00000181218.485.59850191.93060-1.164904.005403.00020K562WDR43
HIST3H2AENSG00000181218.496.8094014.615002.727606.120104.08230K562XRN2
HIST3H2AENSG00000181218.4374.72930183.104201.033102.353701.56800K562ZC3H8
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for HIST3H2A is not available on ENCORE database.






No RBPs affect the alternative splcing events of HIST3H2A on ENCORE database.





The Knockdown/knockout RNA-Seq assay for HIST3H2A is not avaliable on ENCORE database.