GPT

General Information

Gene Name       : GPT
Gene ID             : ENSG00000167701.13
Essential Gene : No

Functions

Localization

Domains (AlphaFold: GPT)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878GPTENSG00000167701.130.000.000.00ENCSR000AEF
HepG2GPTENSG00000167701.135.000.332.67ENCSR985KAT
K562GPTENSG00000167701.130.020.000.01ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for GPT is not avaliable on ENCORE database.



Proteins bound to RNA
  • GPT RNA is bound by 7 proteins.  







eCLIP assay for GPT is not avaliable on ENCORE database.





7 proteins are bound to GPT RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr8145729495145729543+5'-UTR,intron-Distal4.535703.60414HepG2DDX59
chr8145728409145728552+5'-UTR,intron-Proximal3.027314.80002HepG2CSTF2T
chr8145729812145729852+CDS,intron-Proximal3.517934.13746HepG2PPIG
chr8145730222145730270+CDS,intron-Proximal4.354969.28243HepG2PPIG
chr8145731658145731720+CDS4.903395.86613HepG2PPIG
chr8145731071145731150+intron-Distal,intron-Proximal3.952944.38583HepG2DDX59
chr8145729193145729328+intron-Distal4.865807.98391HepG2HNRNPK
chr8145731055145731121+intron-Distal4.269473.57018HepG2HNRNPK
chr8145732066145732112+intron-Proximal5.458407.24749HepG2EFTUD2
chr8145732061145732110+intron-Proximal4.402485.28859HepG2SF3B4
chr8145732234145732280+intron-Proximal3.341353.12708HepG2RBM5
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for GPT is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for GPT is not available on ENCORE database.

  • 47 RBPs can affect the levels of GPT.  








The Knockdown/knockout RNA-Seq assay for GPT is not available on ENCORE database.





47 RBPs can affect the gene expression of GPT :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
GPTENSG00000167701.932.8297094.17110-1.520306.530605.67720HepG2ACO1
GPTENSG00000167701.96.12230100.52530-4.037306.407705.63540HepG2AKAP1
GPTENSG00000167701.976.4061024.423201.645303.745502.71260HepG2BCLAF1
GPTENSG00000167701.9120.1935064.996500.886803.187502.10900HepG2DDX5
GPTENSG00000167701.9256.2488090.097101.5079013.8599012.58160HepG2DKC1
GPTENSG00000167701.940.728309.866702.045304.806003.98490HepG2DNAJC2
GPTENSG00000167701.984.2949034.140801.303903.321502.31840HepG2EEF2
GPTENSG00000167701.981.5778021.880701.898406.729505.48510HepG2EIF4G2
GPTENSG00000167701.924.22910105.11930-2.117207.531206.32410HepG2FIP1L1
GPTENSG00000167701.995.4765031.839401.584205.155104.29860HepG2GPKOW
GPTENSG00000167701.976.8813010.035602.937402.644902.01050HepG2HNRNPA1
GPTENSG00000167701.968.7238023.491201.548604.964504.03960HepG2HNRNPF
GPTENSG00000167701.9107.9810030.385301.829207.410406.43880HepG2HNRNPLL
GPTENSG00000167701.996.6162023.132102.062309.655908.37980HepG2IGF2BP1
GPTENSG00000167701.9163.8002086.086300.928005.171003.78490HepG2KIF1C
GPTENSG00000167701.9129.8381054.453001.253502.769701.93850HepG2LARP4
GPTENSG00000167701.963.1164020.170301.645704.780302.90180HepG2NIP7
GPTENSG00000167701.952.6201016.731501.652903.167301.61630HepG2NOLC1
GPTENSG00000167701.972.6542025.441201.513802.708701.62720HepG2NONO
GPTENSG00000167701.977.1333026.945301.517204.202703.28550HepG2NSUN2
GPTENSG00000167701.948.7773021.283901.196302.167001.39600HepG2PABPC1
GPTENSG00000167701.941.8286072.32990-0.790101.899101.38010HepG2PCBP1
GPTENSG00000167701.946.385609.893502.229005.774604.74250HepG2PPIL4
GPTENSG00000167701.9122.6810021.917802.4846014.0406012.83800HepG2PUF60
GPTENSG00000167701.921.3681076.61820-1.842205.865905.18120HepG2RBM22
GPTENSG00000167701.9133.6672072.340600.885703.414702.67190HepG2RBM25
GPTENSG00000167701.956.3594025.306401.155102.451601.80190HepG2RPLP0
GPTENSG00000167701.966.9491023.400401.516403.972503.01420HepG2RPS3A
GPTENSG00000167701.927.208109.876201.461902.046901.47970HepG2SAFB2
GPTENSG00000167701.976.02620145.78200-0.939203.769402.97770HepG2SF3A3
GPTENSG00000167701.974.9790030.073101.317903.470702.68960HepG2SF3B1
GPTENSG00000167701.9124.8879021.011302.5713016.7509015.29190HepG2SLBP
GPTENSG00000167701.971.3521033.462401.092302.210701.51660HepG2SNRNP70
GPTENSG00000167701.927.2679086.53600-1.666106.297005.62510HepG2SRFBP1
GPTENSG00000167701.986.3491021.638101.996508.241207.23550HepG2SRSF5
GPTENSG00000167701.955.7807023.079501.273103.185602.44460HepG2SRSF7
GPTENSG00000167701.9289.7628075.131201.9473024.4283023.24090HepG2SSB
GPTENSG00000167701.9125.4208027.523702.187907.552706.52490HepG2SUPV3L1
GPTENSG00000167701.935.3064071.89270-1.025902.571902.02970HepG2TAF15
GPTENSG00000167701.960.7233010.761402.496307.906607.14060HepG2TIAL1
GPTENSG00000167701.945.9991010.876702.080305.315004.58480HepG2TRIM56
GPTENSG00000167701.949.6678089.93390-0.856601.830801.30900HepG2U2AF1
GPTENSG00000167701.969.4667022.659001.616103.455602.51770HepG2UBE2L3
GPTENSG00000167701.967.3601025.169801.420102.221201.32740HepG2UPF2
GPTENSG00000167701.951.49330124.82120-1.277405.376604.58750HepG2UTP3
GPTENSG00000167701.9157.4124027.094402.5384012.1678010.67150HepG2XRN2
GPTENSG00000167701.994.08440142.19040-0.595802.330701.81610HepG2ZNF622
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for GPT is not available on ENCORE database.






No RBPs affect the alternative splcing events of GPT on ENCORE database.





The Knockdown/knockout RNA-Seq assay for GPT is not avaliable on ENCORE database.