CACNA1I

General Information

Gene Name       : CACNA1I
Gene ID             : ENSG00000100346.17
Essential Gene : No

Functions

Localization

Domains (AlphaFold: CACNA1I)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878CACNA1IENSG00000100346.170.000.000.00ENCSR000AEF
HepG2CACNA1IENSG00000100346.170.000.000.00ENCSR985KAT
K562CACNA1IENSG00000100346.170.220.210.21ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for CACNA1I is not avaliable on ENCORE database.



Proteins bound to RNA
  • CACNA1I RNA is bound by 3 proteins.  







eCLIP assay for CACNA1I is not avaliable on ENCORE database.





3 proteins are bound to CACNA1I RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr223997954739979718+intron-Distal4.043094.42851K562HNRNPL
chr223997964039979737+intron-Distal6.2756717.55005K562AGGF1
chr223997939539979468+intron-Distal5.683459.25109K562AGGF1
chr223999758439997669+intron-Distal3.968223.57543K562ILF3
chr223997883439978888+intron-Distal5.142347.88608K562AGGF1
chr223997913339979191+intron-Distal5.336177.40074K562AGGF1
chr223997920639979377+intron-Distal7.2059037.65656K562AGGF1
chr223997946839979562+intron-Distal5.3560018.09843K562AGGF1
chr223997956239979640+intron-Distal5.1895716.39973K562AGGF1
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for CACNA1I is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for CACNA1I is not available on ENCORE database.

  • 47 RBPs can affect the levels of CACNA1I.  








The Knockdown/knockout RNA-Seq assay for CACNA1I is not available on ENCORE database.





47 RBPs can affect the gene expression of CACNA1I :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
CACNA1IENSG00000100346.13266.34580113.629401.228904.934203.27830K562ABCF1
CACNA1IENSG00000100346.13286.45890186.819200.616602.634402.07720K562AGGF1
CACNA1IENSG00000100346.13225.52580145.478300.632403.732601.95910K562AKAP1
CACNA1IENSG00000100346.13262.81880194.392100.435001.845901.30780K562AKAP8L
CACNA1IENSG00000100346.13134.10420232.01200-0.790803.864502.36490K562APOBEC3C
CACNA1IENSG00000100346.1359.63970190.71700-1.677105.523204.74320K562AQR
CACNA1IENSG00000100346.13316.93630203.960800.635804.314503.14570K562ATP5C1
CACNA1IENSG00000100346.13210.59560100.746201.063707.047205.48630K562BCLAF1
CACNA1IENSG00000100346.13356.43280223.264900.674804.801303.20990K562CCDC124
CACNA1IENSG00000100346.1379.76420145.53150-0.867502.680001.64050K562CNOT7
CACNA1IENSG00000100346.13364.96540210.572700.793306.428904.70370K562CPEB4
CACNA1IENSG00000100346.13125.9279071.940800.807602.915502.11140K562CPSF6
CACNA1IENSG00000100346.13168.1659076.430901.137604.514203.11890K562CSTF2
CACNA1IENSG00000100346.13137.9985088.358600.643102.610301.32810K562DDX27
CACNA1IENSG00000100346.13359.11760209.190800.779506.725505.26450K562DKC1
CACNA1IENSG00000100346.13230.41910161.946500.508602.546001.39660K562EIF2S1
CACNA1IENSG00000100346.1391.73810154.02430-0.747602.974602.12490K562EIF4A3
CACNA1IENSG00000100346.13220.96550138.713800.671603.116501.87090K562EIF4B
CACNA1IENSG00000100346.1349.42110160.17990-1.6965010.989909.86920K562FXR1
CACNA1IENSG00000100346.1335.9344081.25220-1.177003.326602.53790K562G3BP2
CACNA1IENSG00000100346.13286.9828095.247701.5911013.0844010.02830K562GEMIN5
CACNA1IENSG00000100346.1339.6644073.79890-0.895802.076501.54910K562HNRNPC
CACNA1IENSG00000100346.1353.88540110.77310-1.039603.446702.05100K562HNRNPK
CACNA1IENSG00000100346.13202.40570110.951900.867203.862602.56970K562IGF2BP2
CACNA1IENSG00000100346.13267.71270112.839601.2463010.975808.48550K562IGF2BP3
CACNA1IENSG00000100346.13117.1639058.653700.998102.933501.96800K562KRR1
CACNA1IENSG00000100346.13130.0576065.878700.981203.760401.89910K562LSM11
CACNA1IENSG00000100346.13327.71760231.112500.503802.980902.02720K562MBNL1
CACNA1IENSG00000100346.13112.89830280.26690-1.3118010.676608.57690K562MSI2
CACNA1IENSG00000100346.1377.32440139.81240-0.854502.708401.48690K562PABPC1
CACNA1IENSG00000100346.1372.94300156.83470-1.104404.825103.72960K562PCBP3
CACNA1IENSG00000100346.13294.70670128.611201.196207.126104.54180K562PKM
CACNA1IENSG00000100346.1344.51270120.30070-1.434406.752605.51170K562POLR2G
CACNA1IENSG00000100346.1335.9033092.44800-1.364504.275503.34480K562PRPF8
CACNA1IENSG00000100346.13202.8088066.177301.6156011.108509.02900K562PSIP1
CACNA1IENSG00000100346.1399.59410286.88770-1.5264012.6897010.92900K562PUF60
CACNA1IENSG00000100346.1325.4898077.51900-1.604603.861502.14700K562RAVER1
CACNA1IENSG00000100346.13219.0616060.421001.8581015.6213013.28810K562RCC2
CACNA1IENSG00000100346.13238.04170114.272301.058607.063105.24020K562NELFE
CACNA1IENSG00000100346.1351.33730107.18100-1.062003.557102.32390K562SAFB
CACNA1IENSG00000100346.1354.23420110.81710-1.030903.525401.88000K562SDAD1
CACNA1IENSG00000100346.1333.22700120.66040-1.860509.788608.23840K562SYNCRIP
CACNA1IENSG00000100346.1363.42020112.36800-0.825202.773402.06570K562TARDBP
CACNA1IENSG00000100346.13187.06540108.393800.787203.841902.85460K562TIA1
CACNA1IENSG00000100346.13306.52030202.580100.597403.938002.42070K562TROVE2
CACNA1IENSG00000100346.1349.6740094.71810-0.931202.741301.72800K562UCHL5
CACNA1IENSG00000100346.13269.35850124.562601.112609.410306.60030K562UPF2
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for CACNA1I is not available on ENCORE database.






No RBPs affect the alternative splcing events of CACNA1I on ENCORE database.





The Knockdown/knockout RNA-Seq assay for CACNA1I is not avaliable on ENCORE database.