C11orf68

General Information

Gene Name       : C11orf68
Gene ID             : ENSG00000175573.6
Essential Gene : No

Functions

Localization

Domains (AlphaFold: C11orf68)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878C11orf68ENSG00000175573.66.8611.709.28ENCSR000AEF
HepG2C11orf68ENSG00000175573.619.5411.3515.45ENCSR985KAT
K562C11orf68ENSG00000175573.629.3521.3225.34ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for C11orf68 is not avaliable on ENCORE database.



Proteins bound to RNA
  • C11orf68 RNA is bound by 7 proteins.  







eCLIP assay for C11orf68 is not avaliable on ENCORE database.





7 proteins are bound to C11orf68 RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr116568447865684525-3'-UTR,intron-Distal6.144268.38820K562PABPC4
chr116568490565684971-3'-UTR,CDS,intron-Distal4.315043.72779HepG2LARP4
chr116568448165684574-3'-UTR,intron-Distal3.440837.33628HepG2DDX55
chr116568453565684622-3'-UTR,intron-Distal5.2296210.06964HepG2PCBP2
chr116568638765686479-CDS,intron-Distal4.937635.39850K562DDX3X
chr116568628765686359-intron-Distal3.036473.01436K562CSTF2T
chr116568595565686013-intron-Distal6.0657411.78880HepG2XPO5
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for C11orf68 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for C11orf68 is not available on ENCORE database.

  • 57 RBPs can affect the levels of C11orf68.  








The Knockdown/knockout RNA-Seq assay for C11orf68 is not available on ENCORE database.





57 RBPs can affect the gene expression of C11orf68 :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
C11orf68ENSG00000175573.6359.93520237.955300.596902.334601.51120HepG2BCLAF1
C11orf68ENSG00000175573.6213.84450305.39590-0.514102.529801.79080HepG2CALR
C11orf68ENSG00000175573.6190.19410273.83360-0.525802.533401.66180HepG2DDX24
C11orf68ENSG00000175573.6388.94600587.73590-0.595603.168102.43480HepG2EIF4B
C11orf68ENSG00000175573.6399.93200564.94850-0.498402.976002.28700HepG2G3BP1
C11orf68ENSG00000175573.6571.64080391.855100.544705.027904.09720HepG2HNRNPF
C11orf68ENSG00000175573.6397.99610572.29990-0.524003.488302.70880HepG2HNRNPK
C11orf68ENSG00000175573.6502.53580388.326700.371902.916302.22620HepG2HNRNPL
C11orf68ENSG00000175573.6575.82160385.861100.577403.503002.69590HepG2IGF2BP1
C11orf68ENSG00000175573.6265.05260612.71500-1.2089012.3818011.11470HepG2MATR3
C11orf68ENSG00000175573.6471.44000243.119900.955305.576304.28430HepG2PABPC1
C11orf68ENSG00000175573.6304.17820428.05980-0.492903.142202.42740HepG2PUM2
C11orf68ENSG00000175573.6658.41630465.197700.501105.134704.34250HepG2PUS1
C11orf68ENSG00000175573.6453.36700611.15640-0.430902.255001.68110HepG2QKI
C11orf68ENSG00000175573.6648.02560510.458300.344202.392601.58890HepG2RBM15
C11orf68ENSG00000175573.6462.20870598.76370-0.373402.571802.06730HepG2RBM22
C11orf68ENSG00000175573.6424.16850627.96430-0.566005.401604.68550HepG2NELFE
C11orf68ENSG00000175573.6417.66010584.80450-0.485603.021102.38080HepG2RECQL
C11orf68ENSG00000175573.6561.05770422.187700.410202.308801.67620HepG2RPLP0
C11orf68ENSG00000175573.6447.56280587.50450-0.392503.173702.54540HepG2SF3B4
C11orf68ENSG00000175573.6483.79030386.940900.322202.258501.61380HepG2SLBP
C11orf68ENSG00000175573.6306.91520613.19890-0.9985014.1011013.21110HepG2SRSF1
C11orf68ENSG00000175573.6569.67420384.999400.565205.478704.55610HepG2SRSF7
C11orf68ENSG00000175573.6330.34620498.84530-0.594606.153105.38730HepG2SRSF9
C11orf68ENSG00000175573.6205.56650551.08770-1.4227023.8208022.39910HepG2TAF15
C11orf68ENSG00000175573.6357.44950500.87310-0.486703.130402.46470HepG2U2AF1
C11orf68ENSG00000175573.6438.72590323.003900.441702.770801.45770K562BCCIP
C11orf68ENSG00000175573.6431.93790312.165100.468403.181902.15550K562BCLAF1
C11orf68ENSG00000175573.6679.04960518.703700.388502.944401.80020K562CPEB4
C11orf68ENSG00000175573.6455.46250263.700700.788306.968505.71520K562CPSF6
C11orf68ENSG00000175573.6325.21490236.823800.457502.298901.35320K562CSTF2
C11orf68ENSG00000175573.6650.51030536.738500.277301.973801.40590K562DDX47
C11orf68ENSG00000175573.6427.50860297.741800.521802.730601.82380K562EFTUD2
C11orf68ENSG00000175573.6233.72850170.385000.455902.144301.43740K562EIF3G
C11orf68ENSG00000175573.6521.68210344.118500.600204.555403.44640K562FIP1L1
C11orf68ENSG00000175573.6363.13800268.365100.436202.083401.33660K562FMR1
C11orf68ENSG00000175573.641.62620126.99420-1.609207.334906.06720K562G3BP2
C11orf68ENSG00000175573.6383.43970251.746200.606902.699901.91490K562GPKOW
C11orf68ENSG00000175573.6815.06670601.498300.438303.306902.48320K562GRSF1
C11orf68ENSG00000175573.6446.44760335.242700.413202.339301.30420K562HNRNPF
C11orf68ENSG00000175573.6723.01740485.063500.575805.487403.94250K562HNRNPL
C11orf68ENSG00000175573.6453.85990254.944400.832005.830004.10850K562IGF2BP2
C11orf68ENSG00000175573.6355.79370259.309300.456302.604401.46010K562IGF2BP3
C11orf68ENSG00000175573.6554.94870380.736300.543503.489201.79720K562LIN28B
C11orf68ENSG00000175573.6392.18580245.742200.674304.639903.48490K562METAP2
C11orf68ENSG00000175573.6498.11750366.523300.442502.782701.35480K562PHF6
C11orf68ENSG00000175573.6604.88690390.654400.630705.343704.14300K562PPIG
C11orf68ENSG00000175573.6449.03060336.607400.415602.506201.65180K562PSIP1
C11orf68ENSG00000175573.6430.48570307.088700.487203.187202.11680K562RCC2
C11orf68ENSG00000175573.6420.68410295.044600.511702.397801.63920K562RPS19
C11orf68ENSG00000175573.6385.21740240.975200.676703.715902.53440K562RPS3
C11orf68ENSG00000175573.6193.76440132.049700.553102.507601.69580K562SF3B4
C11orf68ENSG00000175573.6766.05060462.094500.729202.877201.53700K562SFPQ
C11orf68ENSG00000175573.6473.30390291.114100.701105.344103.77860K562SRFBP1
C11orf68ENSG00000175573.6382.85850255.190500.585103.838603.01280K562SRSF1
C11orf68ENSG00000175573.6389.88000232.557600.745305.088003.58610K562SRSF4
C11orf68ENSG00000175573.6372.11980241.010800.626603.224102.07320K562SRSF5
C11orf68ENSG00000175573.6420.42050258.267200.702903.544502.74040K562TARDBP
C11orf68ENSG00000175573.6419.93600249.128400.753206.370805.05560K562TIA1
C11orf68ENSG00000175573.6468.98420323.762700.534503.189502.17980K562TIAL1
C11orf68ENSG00000175573.6361.90930244.474400.565803.204802.01650K562TRA2A
C11orf68ENSG00000175573.6705.07160543.700700.374903.197302.42760K562UPF1
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for C11orf68 is not available on ENCORE database.






No RBPs affect the alternative splcing events of C11orf68 on ENCORE database.





The Knockdown/knockout RNA-Seq assay for C11orf68 is not avaliable on ENCORE database.