ASB16-AS1

General Information

Gene Name       : ASB16-AS1
Gene ID             : ENSG00000267080.5
Essential Gene : No

Functions

Localization

Domains (AlphaFold: ASB16-AS1)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878ASB16-AS1ENSG00000267080.56.956.506.72ENCSR000AEF
HepG2ASB16-AS1ENSG00000267080.55.274.995.13ENCSR985KAT
K562ASB16-AS1ENSG00000267080.57.918.228.07ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for ASB16-AS1 is not avaliable on ENCORE database.



Proteins bound to RNA
  • ASB16-AS1 RNA is bound by 10 proteins.  







eCLIP assay for ASB16-AS1 is not avaliable on ENCORE database.





10 proteins are bound to ASB16-AS1 RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr174225368042253730-intron-Distal3.839656.88517HepG2LSM11
chr174225652242256579-intron-Distal4.195793.72818HepG2ILF3
chr174225562442255727-intron-Distal4.345027.55967HepG2SLTM
chr174225445042254525-intron-Distal4.105413.73331K562RBM15
chr174225481142254856-intron-Distal3.116773.88205HepG2PCBP2
chr174226393242264008-intron-Distal,intron-Proximal3.875943.45994HepG2NCBP2
chr174225564442255713-intron-Distal3.228153.58549K562NONO
chr174226381942263933-intron-Distal3.568117.13900K562AQR
chr174225520442255271-intron-Distal4.356727.22463HepG2XRN2
chr174225520842255281-intron-Distal3.494774.14131HepG2DDX59
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for ASB16-AS1 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for ASB16-AS1 is not available on ENCORE database.

  • 69 RBPs can affect the levels of ASB16-AS1.  








The Knockdown/knockout RNA-Seq assay for ASB16-AS1 is not available on ENCORE database.





69 RBPs can affect the gene expression of ASB16-AS1 :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
ASB16-AS1ENSG00000267080.1324.00370223.473000.535802.763702.16570HepG2BOP1
ASB16-AS1ENSG00000267080.1301.28400205.157200.554302.693902.01420HepG2CPSF6
ASB16-AS1ENSG00000267080.1222.75640139.286400.677303.131902.41320HepG2DDX21
ASB16-AS1ENSG00000267080.1194.66580138.949800.486302.260301.65810HepG2DNAJC2
ASB16-AS1ENSG00000267080.1208.6780095.107301.133606.206105.33640HepG2EIF2S1
ASB16-AS1ENSG00000267080.1231.29460105.106501.137806.725305.72670HepG2EIF4A3
ASB16-AS1ENSG00000267080.1174.80880102.332500.772402.550001.88810HepG2EIF4B
ASB16-AS1ENSG00000267080.1206.78210106.042600.963404.809303.91330HepG2FXR1
ASB16-AS1ENSG00000267080.1198.6710098.372901.013905.216404.31630HepG2G3BP1
ASB16-AS1ENSG00000267080.1172.04890104.431700.720202.703101.82410HepG2G3BP2
ASB16-AS1ENSG00000267080.1152.2513088.807200.777602.626401.54550HepG2GRSF1
ASB16-AS1ENSG00000267080.1272.21730141.562100.943205.904505.00990HepG2HNRNPA1
ASB16-AS1ENSG00000267080.1315.03530157.451401.000506.909105.85360HepG2HNRNPC
ASB16-AS1ENSG00000267080.1167.0074099.604700.745502.758102.06240HepG2HNRNPK
ASB16-AS1ENSG00000267080.1358.88580221.930400.693302.245901.67310HepG2HNRNPLL
ASB16-AS1ENSG00000267080.1152.8865099.995000.612401.974301.39530HepG2IGF2BP2
ASB16-AS1ENSG00000267080.1224.83650159.770600.492802.720301.99290HepG2ILF2
ASB16-AS1ENSG00000267080.1171.05230100.575900.766102.686101.70060HepG2KHSRP
ASB16-AS1ENSG00000267080.1249.64020106.079501.234608.040506.93360HepG2MAGOH
ASB16-AS1ENSG00000267080.1226.46280106.674201.086004.920404.09960HepG2MATR3
ASB16-AS1ENSG00000267080.1232.37950109.187701.089606.077305.15510HepG2NCBP2
ASB16-AS1ENSG00000267080.1263.40000115.847601.184909.841908.93490HepG2PTBP1
ASB16-AS1ENSG00000267080.1133.37490241.52750-0.856704.632803.88440HepG2PUF60
ASB16-AS1ENSG00000267080.1297.53790162.987800.868207.391206.46510HepG2PUS1
ASB16-AS1ENSG00000267080.188.02680162.93830-0.888302.663301.97110HepG2RAVER1
ASB16-AS1ENSG00000267080.1159.36300230.72370-0.533802.491401.99300HepG2RBM22
ASB16-AS1ENSG00000267080.1273.49020128.928701.084808.116607.27670HepG2NELFE
ASB16-AS1ENSG00000267080.1184.92210120.076900.622902.620202.01840HepG2RECQL
ASB16-AS1ENSG00000267080.1223.37100116.673100.936905.286804.46830HepG2RPS19
ASB16-AS1ENSG00000267080.1245.35890109.795301.160002.979901.56650HepG2SF1
ASB16-AS1ENSG00000267080.1177.02090290.84300-0.716303.284502.54780HepG2SF3A3
ASB16-AS1ENSG00000267080.1206.95970120.615400.778804.014303.32350HepG2SF3B4
ASB16-AS1ENSG00000267080.1186.25160260.58720-0.484502.447601.96620HepG2SRFBP1
ASB16-AS1ENSG00000267080.1121.97760236.37160-0.954404.552003.23860HepG2SRSF3
ASB16-AS1ENSG00000267080.1146.33170238.50360-0.704803.671302.96910HepG2SRSF5
ASB16-AS1ENSG00000267080.1181.60280113.155900.682403.123902.53330HepG2TAF15
ASB16-AS1ENSG00000267080.1286.40020152.021400.913704.684204.06810HepG2TIAL1
ASB16-AS1ENSG00000267080.1120.93120276.59610-1.193608.215207.13350HepG2U2AF1
ASB16-AS1ENSG00000267080.1129.7705078.599400.723302.499301.77810HepG2UCHL5
ASB16-AS1ENSG00000267080.1205.27940130.977100.648202.352101.67940HepG2XRN2
ASB16-AS1ENSG00000267080.1405.79250283.677900.516404.269403.62920HepG2ZNF622
ASB16-AS1ENSG00000267080.1230.75890300.95680-0.383202.010001.51130K562AGGF1
ASB16-AS1ENSG00000267080.1237.64340330.65560-0.476502.653301.69650K562AKAP8
ASB16-AS1ENSG00000267080.1198.73260290.90690-0.549702.425601.87020K562AQR
ASB16-AS1ENSG00000267080.1357.84990192.802200.892106.002904.29190K562CCAR1
ASB16-AS1ENSG00000267080.1350.88490215.870000.700704.650202.85310K562DHX30
ASB16-AS1ENSG00000267080.1230.82610337.04610-0.546103.185002.23690K562DKC1
ASB16-AS1ENSG00000267080.1178.52000108.528100.717903.448502.08460K562EIF2S1
ASB16-AS1ENSG00000267080.1341.72100244.982500.480002.891302.15930K562EIF2S2
ASB16-AS1ENSG00000267080.1354.04790196.101800.852203.296002.19010K562EIF3A
ASB16-AS1ENSG00000267080.1553.88160196.726801.4933021.3844019.80220K562HNRNPC
ASB16-AS1ENSG00000267080.1322.42590175.656500.876106.347004.52890K562HNRNPF
ASB16-AS1ENSG00000267080.1549.79180363.288800.597705.056803.58040K562HNRNPL
ASB16-AS1ENSG00000267080.1222.33250332.37040-0.580102.558301.76890K562KIF1C
ASB16-AS1ENSG00000267080.1250.29080372.33280-0.573002.359201.52920K562MBNL1
ASB16-AS1ENSG00000267080.1438.77190284.458900.625205.580104.45610K562MTPAP
ASB16-AS1ENSG00000267080.1155.76430260.97450-0.744503.296802.31780K562NAA15
ASB16-AS1ENSG00000267080.1456.45500316.065100.530204.667903.73100K562NSUN2
ASB16-AS1ENSG00000267080.1649.14480320.436901.018403.402602.01570K562PABPC1
ASB16-AS1ENSG00000267080.1806.34900447.301100.850108.399706.95360K562PCBP3
ASB16-AS1ENSG00000267080.1336.54350192.050400.809205.994803.82680K562PHF6
ASB16-AS1ENSG00000267080.1562.21310343.081600.712507.009105.74300K562POLR2G
ASB16-AS1ENSG00000267080.192.01030158.02240-0.780302.803002.04890K562PRPF8
ASB16-AS1ENSG00000267080.1330.75840176.380400.907002.867701.94440K562PSIP1
ASB16-AS1ENSG00000267080.1173.08900112.732000.618502.715502.05680K562PTBP1
ASB16-AS1ENSG00000267080.1289.53840426.12500-0.557503.165302.29440K562PUF60
ASB16-AS1ENSG00000267080.1574.53970444.097400.371402.664801.72260K562PUM2
ASB16-AS1ENSG00000267080.1192.35180310.64440-0.691502.227401.72940K562PUS1
ASB16-AS1ENSG00000267080.1183.88780302.60260-0.718604.255703.53560K562RBM15
ASB16-AS1ENSG00000267080.1283.80820160.896400.818705.429004.03270K562RCC2
ASB16-AS1ENSG00000267080.1406.02510311.867100.380502.060801.34950K562SF3A3
ASB16-AS1ENSG00000267080.1337.52340212.301800.668803.685902.20690K562SLBP
ASB16-AS1ENSG00000267080.1284.67320152.528400.900105.925104.26220K562SRFBP1
ASB16-AS1ENSG00000267080.1385.82590169.651801.1853010.483008.55910K562TIAL1
ASB16-AS1ENSG00000267080.1350.32340180.202000.959007.726305.95730K562TRIM56
ASB16-AS1ENSG00000267080.1518.30490335.130000.629006.218205.19240K562UPF1
ASB16-AS1ENSG00000267080.1180.49300314.87130-0.802803.529102.01150K562UTP18
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for ASB16-AS1 is not available on ENCORE database.





2 RBPs can affect the splicing of ASB16-AS1 :

Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
SEASB16-AS1ENSG00000267080.1chr17-4226029742260461422589904225908842263932422640390.405000.001040.06973includedHepG2TIAL1
SEASB16-AS1ENSG00000267080.1chr17-4226029742260461422589904225908842263932422640390.478000.000010.00076includedHepG2HNRNPC
SEASB16-AS1ENSG00000267080.1chr17-4226029742260461422589904225908842263932422640390.280000.000530.01120includedK562HNRNPC

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".





The Knockdown/knockout RNA-Seq assay for ASB16-AS1 is not avaliable on ENCORE database.