ARMC8

General Information

Gene Name       : ARMC8
Gene ID             : ENSG00000114098.17
Essential Gene : No

Functions

Localization

Domains (AlphaFold: ARMC8)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878ARMC8ENSG00000114098.1733.7929.3131.55ENCSR000AEF
HepG2ARMC8ENSG00000114098.1715.9622.7019.33ENCSR985KAT
K562ARMC8ENSG00000114098.1723.2525.3024.27ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for ARMC8 is not avaliable on ENCORE database.



Proteins bound to RNA
  • ARMC8 RNA is bound by 16 proteins.  







eCLIP assay for ARMC8 is not avaliable on ENCORE database.





16 proteins are bound to ARMC8 RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr3137965641137965702+3'-UTR,intron-Distal3.573485.38829K562KHSRP
chr3137958292137958358+3'-UTR,CDS,intron-Distal,intron-Proximal3.520053.62357HepG2U2AF2
chr3137964433137964470+3'-UTR,intron-Distal3.415737.48221K562KHSRP
chr3137964274137964396+3'-UTR,intron-Distal3.472878.32476K562KHSRP
chr3137964003137964087+3'-UTR,CDS,intron-Proximal3.463299.26812HepG2EFTUD2
chr3137965565137965629+3'-UTR,intron-Distal3.812363.74676HepG2CSTF2
chr3137964442137964525+3'-UTR,intron-Distal,polyA_site4.308573.66896HepG2FUBP3
chr3138015041138015065+3'-UTR5.3753011.25201K562TARDBP
chr3137965538137965626+3'-UTR,intron-Distal3.425404.76825K562KHSRP
chr3138015065138015098+3'-UTR5.6073613.12320K562TARDBP
chr3137963983137964112+3'-UTR,CDS,intron-Proximal3.939436.98305HepG2PPIG
chr3137964526137964668+3'-UTR,intron-Distal3.969014.49332HepG2CSTF2
chr3137964289137964420+3'-UTR,intron-Distal3.935626.36119HepG2KHSRP
chr3137958307137958371+3'-UTR,CDS,intron-Distal,intron-Proximal4.049647.23562HepG2BCLAF1
chr3137963929137964114+3'-UTR,CDS,intron-Proximal4.020767.91821HepG2GRWD1
chr3138015111138015162+3'-UTR4.223267.30349K562TARDBP
chr3137906418137906483+5'-UTR,CDS,intron-Proximal3.709358.43093HepG2PRPF8
chr3137942230137942286+CDS,intron-Distal,intron-Proximal3.152333.02345K562ZNF622
chr3137983005137983056+CDS,intron-Proximal4.023903.49905HepG2PPIG
chr3137956131137956247+CDS,intron-Distal,intron-Proximal3.633958.96569HepG2U2AF2
chr3137960629137960774+CDS,intron-Distal3.331348.30744HepG2BCLAF1
chr3137942509137942578+CDS,intron-Distal,intron-Proximal3.457764.93175HepG2GRWD1
chr3137942314137942374+CDS,intron-Distal,intron-Proximal4.698864.34038HepG2BCLAF1
chr3137956335137956407+CDS,intron-Distal3.313733.59112HepG2PPIG
chr3137960774137960826+CDS,intron-Distal,intron-Proximal3.698863.68471HepG2BCLAF1
chr3137947818137947859+CDS,intron-Distal,intron-Proximal3.300604.02291HepG2GRWD1
chr3137942228137942299+CDS,intron-Distal,intron-Proximal3.649874.74886HepG2BCLAF1
chr3137956216137956265+CDS,intron-Distal,intron-Proximal4.364998.44604HepG2PRPF8
chr3137953872137953959+CDS,intron-Proximal4.374088.60570K562ZNF622
chr3137956328137956415+CDS,intron-Distal,intron-Proximal3.027456.70604HepG2BCLAF1
chr3137947764137947818+CDS,intron-Distal4.337604.94878HepG2GRWD1
chr3137988960137989023+CDS,intron-Proximal4.281204.22101K562PRPF8
chr3137982581137982668+CDS,intron-Proximal3.292206.82013HepG2PPIG
chr3137966150137966207+intron-Distal3.347753.56114HepG2KHSRP
chr3137967889137967927+intron-Distal3.327013.78824HepG2KHSRP
chr3137923403137923582+intron-Distal3.259545.42643HepG2MATR3
chr3137955031137955130+intron-Distal4.255698.84799HepG2QKI
chr3138004680138004780+intron-Distal3.626285.09669HepG2QKI
chr3137966073137966150+intron-Distal5.095837.58902K562KHSRP
chr3137967803137967881+intron-Distal6.6715518.91613K562CPSF6
chr3137967804137967875+intron-Distal3.958526.63244HepG2KHSRP
chr3137966150137966207+intron-Distal3.264036.04536K562KHSRP
chr3137966937137967055+intron-Distal4.274734.11729K562CPSF6
chr3137923339137923443+intron-Distal4.833594.30178K562PTBP1
chr3137982828137982966+intron-Distal,intron-Proximal4.996498.36768K562KHSRP
chr3137923303137923445+intron-Distal4.927156.76922HepG2PTBP1
chr3137982816137982927+intron-Distal,intron-Proximal4.512795.37430HepG2KHSRP
chr3138004372138004459+intron-Distal3.453846.71645HepG2PTBP1
chr3137923685137923782+intron-Distal3.881166.88352HepG2HNRNPL
chr3137908806137908921+intron-Distal4.297873.74583HepG2PTBP1
chr3137970613137970687+intron-Distal3.151063.68839K562KHSRP
chr3137982737137982828+intron-Distal,intron-Proximal3.431034.98593K562KHSRP
chr3137982369137982442+intron-Distal3.706663.91876HepG2U2AF2
chr3137965835137965946+intron-Distal4.910308.14619K562KHSRP
chr3137979099137979181+intron-Distal5.048176.64929HepG2QKI
chr3137967881137967936+intron-Distal5.5549319.68611K562CPSF6
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for ARMC8 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for ARMC8 is not available on ENCORE database.

  • 46 RBPs can affect the levels of ARMC8.  








The Knockdown/knockout RNA-Seq assay for ARMC8 is not available on ENCORE database.





46 RBPs can affect the gene expression of ARMC8 :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
ARMC8ENSG00000114098.131319.07360965.507800.450102.971802.42260HepG2AKAP1
ARMC8ENSG00000114098.13849.62640707.163200.264702.160601.47200HepG2AKAP8L
ARMC8ENSG00000114098.131252.02240664.544900.9137014.0243012.82430HepG2BOP1
ARMC8ENSG00000114098.131012.25480758.986000.415302.918202.12440HepG2CIRBP
ARMC8ENSG00000114098.131006.13270712.305200.498202.471101.75280HepG2CNOT7
ARMC8ENSG00000114098.131082.99390882.376000.295502.526301.90690HepG2CELF1
ARMC8ENSG00000114098.13522.45700650.96710-0.317302.810101.97030HepG2DDX19B
ARMC8ENSG00000114098.13811.95530591.141200.457804.634503.15650HepG2DDX1
ARMC8ENSG00000114098.13448.46920574.53300-0.357403.185902.49460HepG2DNAJC2
ARMC8ENSG00000114098.13453.41880598.71960-0.401002.828601.73590HepG2EIF3G
ARMC8ENSG00000114098.131412.254101212.606100.219802.090901.55330HepG2ETF1
ARMC8ENSG00000114098.13976.86390691.625200.498103.560702.84300HepG2GPKOW
ARMC8ENSG00000114098.13812.13480585.199800.472703.728602.99470HepG2HNRNPA1
ARMC8ENSG00000114098.13917.97330660.027900.475803.588502.88170HepG2HNRNPLL
ARMC8ENSG00000114098.131177.07300803.005600.551604.905804.02980HepG2IGF2BP2
ARMC8ENSG00000114098.13641.37110856.68260-0.417602.419101.82660HepG2MATR3
ARMC8ENSG00000114098.131070.12070780.887800.454503.303502.51870HepG2PABPC4
ARMC8ENSG00000114098.131061.42730742.738000.515002.776501.55770HepG2PRPF6
ARMC8ENSG00000114098.13948.55540809.714900.228201.758901.30290HepG2PTBP1
ARMC8ENSG00000114098.13894.64640716.925200.319403.234602.58090HepG2PUS1
ARMC8ENSG00000114098.131392.925001013.507300.458705.976805.28750HepG2RBM22
ARMC8ENSG00000114098.131612.72470810.461600.9926010.825409.42650HepG2SF3A3
ARMC8ENSG00000114098.131110.71730726.920800.611503.723502.81160HepG2SNRNP70
ARMC8ENSG00000114098.131353.299201144.706900.241402.484602.00060HepG2SRFBP1
ARMC8ENSG00000114098.131340.05190879.929800.6067010.9206010.11580HepG2SRSF1
ARMC8ENSG00000114098.131055.56000886.748800.251301.985901.44430HepG2SRSF5
ARMC8ENSG00000114098.13856.39920675.723000.341802.185601.57460HepG2SUPV3L1
ARMC8ENSG00000114098.13900.69490726.743800.309502.263801.50540HepG2TIA1
ARMC8ENSG00000114098.13432.61110633.93360-0.551306.255805.46940HepG2TRIM56
ARMC8ENSG00000114098.131161.59780647.595600.8428010.428509.18980HepG2U2AF1
ARMC8ENSG00000114098.131035.23950693.931000.577008.940307.96380HepG2UTP3
ARMC8ENSG00000114098.13733.03400556.526700.397304.051803.26320HepG2ZC3H8
ARMC8ENSG00000114098.131335.62160790.493900.7566020.1454019.00420HepG2ZNF622
ARMC8ENSG00000114098.131002.040501235.51970-0.302202.232801.69630K562AQR
ARMC8ENSG00000114098.13996.93040814.345300.291802.267201.44810K562ATP5C1
ARMC8ENSG00000114098.13499.26730649.39910-0.379302.625701.86070K562CPSF6
ARMC8ENSG00000114098.132189.971201837.766300.252902.798301.81900K562CELF1
ARMC8ENSG00000114098.131019.80090835.296700.287802.294401.50710K562DKC1
ARMC8ENSG00000114098.13839.57320607.223400.467305.050404.26700K562FXR1
ARMC8ENSG00000114098.13943.461901261.92800-0.419603.958203.05640K562GRSF1
ARMC8ENSG00000114098.13438.96380624.01920-0.507503.840803.15180K562HNRNPC
ARMC8ENSG00000114098.13644.46020824.72990-0.355802.542601.41400K562IGF2BP3
ARMC8ENSG00000114098.13399.65420559.50170-0.485403.224702.23560K562PSIP1
ARMC8ENSG00000114098.132087.669601734.635800.267202.955001.84840K562PUM1
ARMC8ENSG00000114098.131121.01880769.844700.542104.861704.16790K562PUS1
ARMC8ENSG00000114098.13954.46170750.005800.347702.872602.26980K562RBM15
ARMC8ENSG00000114098.13748.04940563.277300.409203.300102.40420K562SYNCRIP
ARMC8ENSG00000114098.13629.21300792.54320-0.332902.312101.57110K562TIA1
ARMC8ENSG00000114098.13422.58570571.72610-0.436102.782901.83340K562TRIM56
ARMC8ENSG00000114098.131073.84830776.126100.468307.039105.74780K562WDR43
ARMC8ENSG00000114098.131079.179901391.91750-0.367103.202402.26600K562ZC3H8
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for ARMC8 is not available on ENCORE database.





11 RBPs can affect the splicing of ARMC8 :

Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
SEARMC8ENSG00000114098.13chr3+1379286581379287351379061251379064411379407671379408390.160000.001140.02334includedK562SRSF1
SEARMC8ENSG00000114098.13chr3+1379072421379073721379061831379064411379286581379287350.381000.005460.08142includedHepG2U2AF1
SEARMC8ENSG00000114098.13chr3+137947759137947852137942477137942575137953875137953956-0.136000.000250.00624excludedHepG2U2AF1
SEARMC8ENSG00000114098.13chr3+137907296137907372137906108137906441137928658137928735-0.290000.001940.04627excludedHepG2HNRNPK
SEARMC8ENSG00000114098.13chr3+137947759137947852137942477137942575137953875137953956-0.076000.008200.07805excludedHepG2U2AF2
SEARMC8ENSG00000114098.13chr3+137958309137958370137956323137956414137960624137960825-0.087000.004600.05840excludedK562PUS1
SEARMC8ENSG00000114098.13chr3+137928658137928735137906125137906441137940767137940839-0.467000.000010.00020excludedK562PUS1
SEARMC8ENSG00000114098.13chr3+1379072421379073721379061831379064411379286581379287350.353000.000000.00019includedK562U2AF1
SEARMC8ENSG00000114098.13chr3+137947759137947852137942477137942575137953875137953956-0.175000.000070.00237excludedK562U2AF1
SEARMC8ENSG00000114098.13chr3+137907242137907372137906183137906441137940767137940839-0.451000.001140.08318excludedHepG2DDX6
SEARMC8ENSG00000114098.13chr3+1379286581379287351379061251379064411379407671379408390.274000.000040.00782includedHepG2SUPV3L1
SEARMC8ENSG00000114098.13chr3+1379072961379073721379061081379064411379407671379408390.431000.000210.07209includedHepG2BCCIP
SEARMC8ENSG00000114098.13chr3+137947759137947852137942477137942575137953875137953956-0.111000.006580.08919excludedK562U2AF2
SEARMC8ENSG00000114098.13chr3+1379072961379073721379061081379064411379286581379287350.293000.000020.00159includedK562TARDBP
SEARMC8ENSG00000114098.13chr3+1379286581379287351379061251379064411379407671379408390.188000.000960.03662includedK562HNRNPU
A3SSARMC8ENSG00000114098.13chr3+1379422161379423731379422301379423731379407671379408390.154000.000190.00158longerK562AQR
A3SSARMC8ENSG00000114098.13chr3+1379407251379408391379407671379408391379286581379287350.074000.003800.02268longerK562AQR
A3SSARMC8ENSG00000114098.13chr3+1379286291379287421379286581379287421379063721379064410.077000.008920.04795longerK562AQR
MXEARMC8ENSG00000114098.13chr3+1379407671379408391379422301379423731379063691379064411379424771379425750.084000.006070.079611includedK562PUS1
MXEARMC8ENSG00000114098.13chr3+1379424771379425751379477591379478521379407671379408391379538751379539560.092000.002010.014681includedHepG2U2AF2
MXEARMC8ENSG00000114098.13chr3+137993290137993386138003272138003368137991808137991958138007889138007962-0.143000.021470.097752includedHepG2U2AF2
MXEARMC8ENSG00000114098.13chr3+137991808137991958137993290137993386137988881137988974138003272138003368-0.136000.007930.044762includedHepG2U2AF2

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".





The Knockdown/knockout RNA-Seq assay for ARMC8 is not avaliable on ENCORE database.