APOBEC3G

General Information

Gene Name       : APOBEC3G
Gene ID             : ENSG00000239713.8
Essential Gene : No

Functions

Localization

Domains (AlphaFold: APOBEC3G)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878APOBEC3GENSG00000239713.8106.06116.22111.14ENCSR000AEF
HepG2APOBEC3GENSG00000239713.81.041.881.46ENCSR985KAT
K562APOBEC3GENSG00000239713.86.588.097.33ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for APOBEC3G is not avaliable on ENCORE database.



Proteins bound to RNA
  • APOBEC3G RNA is bound by 1 proteins.  







eCLIP assay for APOBEC3G is not avaliable on ENCORE database.





1 proteins are bound to APOBEC3G RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr223944948939449575+3'-UTR,intron-Distal4.136673.20319K562UPF1
chr223944932139449388+3'-UTR,intron-Distal4.456784.68979HepG2UPF1
chr223944947739449528+3'-UTR,intron-Distal5.367369.50783HepG2UPF1
chr223944952839449579+3'-UTR,intron-Distal5.236839.76086HepG2UPF1
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for APOBEC3G is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for APOBEC3G is not available on ENCORE database.

  • 67 RBPs can affect the levels of APOBEC3G.  








The Knockdown/knockout RNA-Seq assay for APOBEC3G is not available on ENCORE database.





67 RBPs can affect the gene expression of APOBEC3G :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
APOBEC3GENSG00000239713.335.2271070.32400-0.997302.329201.34270HepG2AATF
APOBEC3GENSG00000239713.363.84410151.88490-1.250402.696302.17110HepG2AKAP1
APOBEC3GENSG00000239713.3216.6580078.731001.460308.582106.86780HepG2CCAR1
APOBEC3GENSG00000239713.321.0467061.49750-1.546904.566403.75330HepG2CKAP4
APOBEC3GENSG00000239713.375.6803033.550901.173502.642901.38290HepG2DDX27
APOBEC3GENSG00000239713.375.79920145.52630-0.941001.911801.38200HepG2DDX3X
APOBEC3GENSG00000239713.3111.4947058.859900.921503.211202.49100HepG2DKC1
APOBEC3GENSG00000239713.3120.7623053.880801.164205.254104.31340HepG2DNAJC21
APOBEC3GENSG00000239713.323.68600129.27560-2.448306.021805.03570HepG2EIF4B
APOBEC3GENSG00000239713.3130.1962071.875300.857003.099602.23970HepG2EIF4G2
APOBEC3GENSG00000239713.3152.1833076.158100.998603.941102.61380HepG2FUS
APOBEC3GENSG00000239713.3181.7961045.959801.9838012.3591011.09510HepG2GPKOW
APOBEC3GENSG00000239713.3127.1837054.397101.225205.000504.16560HepG2HNRNPA1
APOBEC3GENSG00000239713.3118.1312060.508400.965103.114402.38410HepG2HNRNPC
APOBEC3GENSG00000239713.367.39560125.72470-0.899501.949301.35660HepG2HNRNPK
APOBEC3GENSG00000239713.3214.3459069.281401.6293015.1780013.71200HepG2HNRNPL
APOBEC3GENSG00000239713.334.83780118.50380-1.766203.040902.00800HepG2IGF2BP3
APOBEC3GENSG00000239713.3104.0885055.550400.905802.832801.62340HepG2KHDRBS1
APOBEC3GENSG00000239713.3173.63500104.881100.727202.718801.48490HepG2KRR1
APOBEC3GENSG00000239713.370.86650133.97320-0.918801.950201.39500HepG2MAGOH
APOBEC3GENSG00000239713.3115.0116044.730801.362304.365903.13290HepG2MTPAP
APOBEC3GENSG00000239713.3166.5574057.858301.525308.050006.02200HepG2NAA15
APOBEC3GENSG00000239713.338.50000137.92930-1.841004.332003.54620HepG2NCBP2
APOBEC3GENSG00000239713.3123.3456075.416200.709702.465301.74790HepG2NOL12
APOBEC3GENSG00000239713.390.6121032.857501.463404.613103.18030HepG2NONO
APOBEC3GENSG00000239713.379.6351038.890101.033902.572301.84960HepG2NSUN2
APOBEC3GENSG00000239713.357.70690114.79340-0.992203.891903.19810HepG2PCBP1
APOBEC3GENSG00000239713.391.6994053.611400.774302.349601.66540HepG2PPIL4
APOBEC3GENSG00000239713.355.96360116.81300-1.061604.256903.61030HepG2PTBP1
APOBEC3GENSG00000239713.3148.7372071.990701.046804.755704.00040HepG2PUF60
APOBEC3GENSG00000239713.332.7056069.56910-1.088902.100601.47990HepG2RAVER1
APOBEC3GENSG00000239713.338.5304071.35310-0.889001.751601.31510HepG2RBM22
APOBEC3GENSG00000239713.3148.3649069.380801.096404.350101.77110HepG2RBM34
APOBEC3GENSG00000239713.384.60970129.99630-0.619601.896301.42930HepG2NELFE
APOBEC3GENSG00000239713.3112.7776061.665700.870802.849802.15790HepG2RPLP0
APOBEC3GENSG00000239713.3108.2160063.379900.771702.240401.68170HepG2RPS19
APOBEC3GENSG00000239713.321.6151090.68630-2.068808.542507.30490HepG2SF3A3
APOBEC3GENSG00000239713.366.71080121.60590-0.866202.980102.37020HepG2SF3B4
APOBEC3GENSG00000239713.381.17810126.93500-0.644901.926301.51130HepG2SRSF1
APOBEC3GENSG00000239713.3136.2172069.977600.960804.455103.83580HepG2SSB
APOBEC3GENSG00000239713.379.8176035.685101.161303.333402.59880HepG2SUPV3L1
APOBEC3GENSG00000239713.3150.5079058.399801.365707.766707.00650HepG2TIAL1
APOBEC3GENSG00000239713.372.0491032.714401.139002.876401.85260HepG2UPF2
APOBEC3GENSG00000239713.368.1686035.127700.956402.451001.76470HepG2XRN2
APOBEC3GENSG00000239713.324.7185088.45220-1.839308.074907.26770HepG2ZNF622
APOBEC3GENSG00000239713.3202.67920357.78550-0.819906.827205.99350K562AGGF1
APOBEC3GENSG00000239713.3248.13680372.29090-0.585303.591102.84320K562AKAP8L
APOBEC3GENSG00000239713.3305.76480175.332500.802204.690003.54320K562BOP1
APOBEC3GENSG00000239713.3211.73670146.412900.532102.302501.35760K562CCAR1
APOBEC3GENSG00000239713.3273.42600186.413400.552502.841002.04820K562CPSF6
APOBEC3GENSG00000239713.3557.69550415.419500.424802.638201.68560K562CELF1
APOBEC3GENSG00000239713.3276.57430400.61890-0.534603.907802.84350K562DKC1
APOBEC3GENSG00000239713.3379.66210195.994700.953808.272506.71930K562FIP1L1
APOBEC3GENSG00000239713.3271.46970189.700900.517002.343701.55470K562FMR1
APOBEC3GENSG00000239713.394.30090148.99470-0.659902.474001.89510K562FXR1
APOBEC3GENSG00000239713.3338.55780177.966600.927706.964805.70200K562GPKOW
APOBEC3GENSG00000239713.3397.41420193.845801.035609.424508.37520K562HNRNPC
APOBEC3GENSG00000239713.3401.94370277.359000.535103.541602.32860K562HNRNPL
APOBEC3GENSG00000239713.3143.71340202.39720-0.494002.145001.36000K562HNRNPU
APOBEC3GENSG00000239713.3367.06550265.706900.466102.369001.62910K562HSPD1
APOBEC3GENSG00000239713.3117.62800170.56540-0.536102.066501.33520K562MAGOH
APOBEC3GENSG00000239713.3273.48450442.60870-0.694605.718104.32270K562MBNL1
APOBEC3GENSG00000239713.3296.30820173.720500.770204.184903.09420K562METAP2
APOBEC3GENSG00000239713.396.78580166.69950-0.784403.698702.12950K562PCBP1
APOBEC3GENSG00000239713.372.55460151.77170-1.064804.757003.46520K562PCBP2
APOBEC3GENSG00000239713.3417.36210296.648400.492402.442101.66260K562PCBP3
APOBEC3GENSG00000239713.3305.72250227.535500.426002.099701.40230K562POLR2G
APOBEC3GENSG00000239713.3308.60830222.513700.471802.353001.59770K562PPIG
APOBEC3GENSG00000239713.3184.92980369.21870-0.997506.834006.02490K562PUS1
APOBEC3GENSG00000239713.3217.53840359.74110-0.725705.398604.59550K562RBM15
APOBEC3GENSG00000239713.3274.61720158.525000.792605.177103.81610K562RCC2
APOBEC3GENSG00000239713.394.78100154.22890-0.702403.030702.13510K562SF3B4
APOBEC3GENSG00000239713.3314.86020167.166400.913306.097604.65090K562TIAL1
APOBEC3GENSG00000239713.3403.33890297.075000.441102.769901.50050K562TROVE2
APOBEC3GENSG00000239713.3250.15310142.587500.810904.455403.13480K562UCHL5
APOBEC3GENSG00000239713.3339.58720238.310800.510802.723101.85310K562WDR3
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for APOBEC3G is not available on ENCORE database.






No RBPs affect the alternative splcing events of APOBEC3G on ENCORE database.





The Knockdown/knockout RNA-Seq assay for APOBEC3G is not avaliable on ENCORE database.