ZSCAN16-AS1

General Information

Gene Name       : ZSCAN16-AS1
Gene ID             : ENSG00000269293.2
Essential Gene : No

Functions

Localization

Domains (AlphaFold: ZSCAN16-AS1)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878ZSCAN16-AS1ENSG00000269293.22.343.092.71ENCSR000AEF
HepG2ZSCAN16-AS1ENSG00000269293.23.542.513.02ENCSR985KAT
K562ZSCAN16-AS1ENSG00000269293.25.337.256.29ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for ZSCAN16-AS1 is not avaliable on ENCORE database.



Proteins bound to RNA
  • ZSCAN16-AS1 RNA is bound by 5 proteins.  







eCLIP assay for ZSCAN16-AS1 is not avaliable on ENCORE database.





5 proteins are bound to ZSCAN16-AS1 RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr62810438228104523-intron-Distal4.445568.01338K562AQR
chr62810453628104582-intron-Distal5.4238219.04529K562DDX3X
chr62809091928090992-intron-Distal3.726908.28216K562DDX3X
chr62809038028090453-intron-Distal3.220163.73564K562RBFOX2
chr62810452128104536-intron-Distal5.6483610.19736K562DDX3X
chr62810128928101435-intron-Distal5.135805.39854K562PTBP1
chr62810138028101446-intron-Distal4.884327.38844HepG2PTBP1
chr62809063928090719-intron-Distal3.095433.81669K562KHDRBS1
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for ZSCAN16-AS1 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for ZSCAN16-AS1 is not available on ENCORE database.

  • 46 RBPs can affect the levels of ZSCAN16-AS1.  








The Knockdown/knockout RNA-Seq assay for ZSCAN16-AS1 is not available on ENCORE database.





46 RBPs can affect the gene expression of ZSCAN16-AS1 :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
ZSCAN16-AS1ENSG00000269293.2263.23340157.225200.743403.746302.85600HepG2CIRBP
ZSCAN16-AS1ENSG00000269293.2137.6978075.648400.864003.876803.11490HepG2CKAP4
ZSCAN16-AS1ENSG00000269293.2166.78230116.450100.518202.309501.62410HepG2DAZAP1
ZSCAN16-AS1ENSG00000269293.242.49970164.61180-1.9535011.1481010.00550HepG2DDX6
ZSCAN16-AS1ENSG00000269293.280.02970170.24440-1.089004.246403.40400HepG2EIF4B
ZSCAN16-AS1ENSG00000269293.239.0738072.24150-0.886602.466601.53780HepG2HDGF
ZSCAN16-AS1ENSG00000269293.287.08620166.32840-0.933503.826503.04400HepG2IGF2BP2
ZSCAN16-AS1ENSG00000269293.273.97210156.13710-1.077802.573701.62710HepG2IGF2BP3
ZSCAN16-AS1ENSG00000269293.278.49230177.48060-1.177005.449904.58870HepG2MATR3
ZSCAN16-AS1ENSG00000269293.254.7927099.94560-0.867202.256001.46880HepG2PABPC1
ZSCAN16-AS1ENSG00000269293.275.23650127.30740-0.758803.013202.38400HepG2PCBP1
ZSCAN16-AS1ENSG00000269293.260.77050110.23740-0.859202.600202.01980HepG2PUF60
ZSCAN16-AS1ENSG00000269293.264.29370116.93990-0.863002.779302.10690HepG2PUM2
ZSCAN16-AS1ENSG00000269293.2129.6662073.903900.811002.202101.32630HepG2RBM27
ZSCAN16-AS1ENSG00000269293.286.05770134.24230-0.641502.282101.71600HepG2RECQL
ZSCAN16-AS1ENSG00000269293.297.01880160.47760-0.726003.254902.72530HepG2SRFBP1
ZSCAN16-AS1ENSG00000269293.2213.9629097.327101.136305.465904.01710HepG2SRSF3
ZSCAN16-AS1ENSG00000269293.252.81930108.85470-1.043303.739103.03230HepG2SRSF5
ZSCAN16-AS1ENSG00000269293.257.97120114.51680-0.982204.173403.52150HepG2SRSF9
ZSCAN16-AS1ENSG00000269293.2235.87230139.335400.759304.887504.24310HepG2SSB
ZSCAN16-AS1ENSG00000269293.278.63950123.78810-0.654502.070901.51780HepG2SUCLG1
ZSCAN16-AS1ENSG00000269293.236.5161069.28410-0.924002.351601.82350HepG2TRIM56
ZSCAN16-AS1ENSG00000269293.2238.4936096.101301.311203.425402.32370HepG2U2AF2
ZSCAN16-AS1ENSG00000269293.2105.3993048.155501.130004.573903.59480HepG2UCHL5
ZSCAN16-AS1ENSG00000269293.2113.6792050.664501.165804.721903.97310HepG2UTP3
ZSCAN16-AS1ENSG00000269293.2538.47570358.675900.586105.457304.70330K562AGGF1
ZSCAN16-AS1ENSG00000269293.21081.08250329.859201.7125018.6683017.31270K562AQR
ZSCAN16-AS1ENSG00000269293.2242.67440328.15720-0.435402.355301.34150K562CPEB4
ZSCAN16-AS1ENSG00000269293.2167.24210339.50970-1.0215010.053708.90230K562DDX47
ZSCAN16-AS1ENSG00000269293.2240.70980164.700400.547402.553701.67970K562EFTUD2
ZSCAN16-AS1ENSG00000269293.2101.19870161.29910-0.672502.660301.87720K562EIF3G
ZSCAN16-AS1ENSG00000269293.2330.23750210.359700.650504.370302.72990K562EXOSC5
ZSCAN16-AS1ENSG00000269293.2128.83900217.92460-0.758301.966501.43970K562FXR1
ZSCAN16-AS1ENSG00000269293.2361.22220239.592500.592203.316602.49180K562GRSF1
ZSCAN16-AS1ENSG00000269293.2404.11970260.431000.633803.952702.44110K562HNRNPK
ZSCAN16-AS1ENSG00000269293.2317.85770212.235500.582602.795901.86150K562HNRNPM
ZSCAN16-AS1ENSG00000269293.2596.37990396.086600.590304.511503.41850K562KIF1C
ZSCAN16-AS1ENSG00000269293.2386.62950255.549700.597205.049904.08330K562NSUN2
ZSCAN16-AS1ENSG00000269293.2323.98270218.322400.569403.077601.42630K562PKM
ZSCAN16-AS1ENSG00000269293.2270.63310180.933100.580802.651501.76980K562PSIP1
ZSCAN16-AS1ENSG00000269293.2169.03450266.28070-0.655604.025503.23860K562PTBP1
ZSCAN16-AS1ENSG00000269293.2302.40110389.53380-0.365302.008701.31240K562PUF60
ZSCAN16-AS1ENSG00000269293.2818.97340370.151701.1456015.7916014.53420K562PUS1
ZSCAN16-AS1ENSG00000269293.2545.43280360.636600.596805.318104.52010K562RBM15
ZSCAN16-AS1ENSG00000269293.2868.36650408.879901.086503.046701.73430K562SNRNP200
ZSCAN16-AS1ENSG00000269293.2250.75910174.026400.526902.201901.37620K562TIAL1
ZSCAN16-AS1ENSG00000269293.2266.50980184.889100.527402.379601.51330K562TRIM56
ZSCAN16-AS1ENSG00000269293.2359.41690231.854800.632304.393603.28180K562WDR3
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for ZSCAN16-AS1 is not available on ENCORE database.






No RBPs affect the alternative splcing events of ZSCAN16-AS1 on ENCORE database.





The Knockdown/knockout RNA-Seq assay for ZSCAN16-AS1 is not avaliable on ENCORE database.