ZIC2

General Information

Gene Name       : ZIC2
Gene ID             : ENSG00000043355.11
Essential Gene : No

Functions

Localization

Domains (AlphaFold: ZIC2)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878ZIC2ENSG00000043355.110.000.000.00ENCSR000AEF
HepG2ZIC2ENSG00000043355.110.090.190.14ENCSR985KAT
K562ZIC2ENSG00000043355.114.684.944.81ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for ZIC2 is not avaliable on ENCORE database.



Proteins bound to RNA
  • ZIC2 RNA is bound by 1 proteins.  







eCLIP assay for ZIC2 is not avaliable on ENCORE database.





1 proteins are bound to ZIC2 RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr13100638281100638320+3'-UTR4.2199910.36810K562PUM2
chr13100638772100638825+3'-UTR5.3923111.85613K562PUM2
chr13100638835100638882+3'-UTR4.901274.56848K562PUM2
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for ZIC2 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for ZIC2 is not available on ENCORE database.

  • 53 RBPs can affect the levels of ZIC2.  








The Knockdown/knockout RNA-Seq assay for ZIC2 is not available on ENCORE database.





53 RBPs can affect the gene expression of ZIC2 :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
ZIC2ENSG00000043355.643.432602.374004.193307.347506.52570HepG2AKAP1
ZIC2ENSG00000043355.654.910408.204302.742508.130106.90020HepG2AKAP8L
ZIC2ENSG00000043355.623.760008.162701.541301.916801.34900HepG2CKAP4
ZIC2ENSG00000043355.677.1975015.710002.296807.008405.79420HepG2CNOT7
ZIC2ENSG00000043355.667.5078020.720101.703904.778503.89600HepG2CPSF6
ZIC2ENSG00000043355.642.9941020.042601.101002.368001.67420HepG2DAZAP1
ZIC2ENSG00000043355.651.356402.272604.4980010.108108.97800HepG2DDX3X
ZIC2ENSG00000043355.666.9311023.529101.508103.538802.43590HepG2DDX59
ZIC2ENSG00000043355.652.9730017.238501.619504.078003.23750HepG2DNAJC21
ZIC2ENSG00000043355.626.209901.876603.803804.999404.21470HepG2EIF2S1
ZIC2ENSG00000043355.646.6920011.912701.970603.875402.81670HepG2EIF3D
ZIC2ENSG00000043355.686.754302.020805.4239017.6722016.03730HepG2EIF4B
ZIC2ENSG00000043355.662.0847018.954101.711605.243004.14030HepG2EIF4G2
ZIC2ENSG00000043355.6101.8203020.755102.294404.868903.52820HepG2FTO
ZIC2ENSG00000043355.625.265201.471004.102204.977203.93580HepG2FUBP3
ZIC2ENSG00000043355.620.091001.941503.371203.691202.92630HepG2G3BP1
ZIC2ENSG00000043355.68.4821025.61910-1.594702.133201.49710HepG2HNRNPF
ZIC2ENSG00000043355.616.845701.972203.094402.594501.91660HepG2HNRNPK
ZIC2ENSG00000043355.634.1919012.166901.490602.240501.38410HepG2HNRNPM
ZIC2ENSG00000043355.617.762601.972603.170602.930802.23960HepG2IGF2BP2
ZIC2ENSG00000043355.627.019401.855003.864403.948702.77510HepG2IGF2BP3
ZIC2ENSG00000043355.614.186802.156502.717701.991701.44990HepG2NCBP2
ZIC2ENSG00000043355.633.569902.735303.617306.537205.76600HepG2PTBP1
ZIC2ENSG00000043355.659.8405020.133401.571404.528503.68140HepG2PUM2
ZIC2ENSG00000043355.688.9529015.181702.550609.399008.57220HepG2RBM22
ZIC2ENSG00000043355.613.617102.686102.341701.906101.33710HepG2RBM25
ZIC2ENSG00000043355.641.4821010.624601.965003.341702.15840HepG2RPS5
ZIC2ENSG00000043355.642.128802.843903.888708.280907.34340HepG2SF3B4
ZIC2ENSG00000043355.637.054006.802702.445402.981601.46370HepG2SFPQ
ZIC2ENSG00000043355.620.140502.970002.761502.917902.43580HepG2SRSF1
ZIC2ENSG00000043355.61.6289014.88430-3.191802.812502.29710HepG2SSB
ZIC2ENSG00000043355.6134.6532015.087103.1578016.2906014.71930HepG2U2AF1
ZIC2ENSG00000043355.654.601207.309402.901004.639303.34020HepG2U2AF2
ZIC2ENSG00000043355.6113.478107.434403.9320024.5754022.91020HepG2UPF1
ZIC2ENSG00000043355.637.552407.642002.296804.612803.29940HepG2UTP18
ZIC2ENSG00000043355.631.413107.177702.129703.287402.64460HepG2UTP3
ZIC2ENSG00000043355.6293.70860409.92890-0.481002.711001.50450K562ABCF1
ZIC2ENSG00000043355.6341.25340209.244100.705605.208104.47000K562AGGF1
ZIC2ENSG00000043355.6323.10980229.916300.490802.576001.63320K562AKAP8
ZIC2ENSG00000043355.6339.80850217.725200.642102.712402.06570K562AKAP8L
ZIC2ENSG00000043355.6363.29070240.977800.592103.131102.51410K562AQR
ZIC2ENSG00000043355.6372.96510228.440900.707105.765904.38990K562ATP5C1
ZIC2ENSG00000043355.6428.53160234.305300.870909.113507.33190K562DKC1
ZIC2ENSG00000043355.6182.42350126.381400.529402.373101.32680K562EIF4B
ZIC2ENSG00000043355.6184.48660264.79920-0.521402.298001.46880K562FTO
ZIC2ENSG00000043355.6209.35150145.946400.520402.276301.71880K562FXR1
ZIC2ENSG00000043355.6206.37380293.20870-0.506702.410601.66730K562GPKOW
ZIC2ENSG00000043355.6331.63180202.075200.714602.475801.34090K562HNRNPA2B1
ZIC2ENSG00000043355.688.55140208.03830-1.232307.544906.60580K562HNRNPC
ZIC2ENSG00000043355.6317.06150225.272400.493002.884701.97240K562HNRNPU
ZIC2ENSG00000043355.6250.54060160.012300.646803.703402.72160K562MAGOH
ZIC2ENSG00000043355.6427.76680258.856000.724605.848004.43740K562MBNL1
ZIC2ENSG00000043355.6296.46560181.438500.708303.175902.21860K562NAA15
ZIC2ENSG00000043355.6330.26260215.943500.612903.469802.87220K562PUS1
ZIC2ENSG00000043355.6374.71930210.387900.832707.068006.14950K562RBM15
ZIC2ENSG00000043355.6327.58450243.920900.425402.204701.47060K562SYNCRIP
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for ZIC2 is not available on ENCORE database.






No RBPs affect the alternative splcing events of ZIC2 on ENCORE database.





The Knockdown/knockout RNA-Seq assay for ZIC2 is not avaliable on ENCORE database.