TRAF1

General Information

Gene Name       : TRAF1
Gene ID             : ENSG00000056558.10
Essential Gene : No

Functions

Localization

Domains (AlphaFold: TRAF1)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878TRAF1ENSG00000056558.1052.2795.1873.73ENCSR000AEF
HepG2TRAF1ENSG00000056558.100.370.380.38ENCSR985KAT
K562TRAF1ENSG00000056558.100.040.080.06ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for TRAF1 is not avaliable on ENCORE database.



Proteins bound to RNA

  • NO known proteins bind on TRAF1 RNA with finished eCLIP experiments on ENCORE database.





eCLIP assay for TRAF1 is not avaliable on ENCORE database.






NO known proteins are bound to TRAF1 RNA with finished eCLIP experiments on ENCORE database.





eCLIP assay for TRAF1 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for TRAF1 is not available on ENCORE database.

  • 62 RBPs can affect the levels of TRAF1.  








The Knockdown/knockout RNA-Seq assay for TRAF1 is not available on ENCORE database.





62 RBPs can affect the gene expression of TRAF1 :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
TRAF1ENSG00000056558.6131.5692083.461400.656502.315901.67890HepG2AUH
TRAF1ENSG00000056558.692.1582052.938600.799702.219401.38400HepG2BCCIP
TRAF1ENSG00000056558.6199.9226044.814802.1573016.8845015.58700HepG2BOP1
TRAF1ENSG00000056558.6146.0324084.493200.789302.569501.63460HepG2CCAR1
TRAF1ENSG00000056558.6129.3743066.941000.950504.251503.46060HepG2CKAP4
TRAF1ENSG00000056558.6172.0164069.792401.301305.600204.50800HepG2CNOT7
TRAF1ENSG00000056558.6101.1151041.140601.297304.447803.59350HepG2CPSF6
TRAF1ENSG00000056558.6110.5282061.663800.841802.697102.06090HepG2CELF1
TRAF1ENSG00000056558.6133.4961066.335401.008804.456103.55100HepG2DAZAP1
TRAF1ENSG00000056558.6107.6102064.668900.734602.093401.49430HepG2DDX21
TRAF1ENSG00000056558.6102.3619052.041000.975903.015502.21450HepG2DDX55
TRAF1ENSG00000056558.6124.8601064.062300.962703.770503.00310HepG2DKC1
TRAF1ENSG00000056558.6111.2659061.151200.863502.585202.01190HepG2EIF2S1
TRAF1ENSG00000056558.6139.4796067.602701.044802.777102.13660HepG2EIF4A3
TRAF1ENSG00000056558.6152.2997065.776101.211204.647703.77000HepG2EIF4B
TRAF1ENSG00000056558.6139.8757065.416601.096304.778803.72760HepG2EIF4G1
TRAF1ENSG00000056558.6222.2610095.837701.213508.556607.60000HepG2ETF1
TRAF1ENSG00000056558.6133.5845076.332400.807302.086601.41370HepG2FIP1L1
TRAF1ENSG00000056558.6134.5528041.214801.706805.213403.82470HepG2FTO
TRAF1ENSG00000056558.6143.3820063.244801.180705.311404.40200HepG2G3BP1
TRAF1ENSG00000056558.6118.7799046.631301.348805.009304.16420HepG2GPKOW
TRAF1ENSG00000056558.6175.8596052.591301.7414010.219808.96050HepG2HNRNPC
TRAF1ENSG00000056558.6180.0546099.870600.850203.469402.08790HepG2HSPD1
TRAF1ENSG00000056558.6121.9699064.300100.923503.161302.44550HepG2IGF2BP2
TRAF1ENSG00000056558.6103.1197045.396301.183603.126102.09130HepG2MTPAP
TRAF1ENSG00000056558.6138.4101065.776301.073204.718403.72290HepG2NOL12
TRAF1ENSG00000056558.619.9517063.78880-1.676804.306603.18440HepG2PABPC1
TRAF1ENSG00000056558.6102.3026062.541200.709901.970801.35280HepG2PABPC4
TRAF1ENSG00000056558.6135.0577062.780501.105104.444203.70930HepG2PUF60
TRAF1ENSG00000056558.6213.4982066.634001.6798015.1096013.95270HepG2PUM1
TRAF1ENSG00000056558.6132.4178066.591700.991603.058702.35270HepG2PUM2
TRAF1ENSG00000056558.6136.7767057.006101.262505.724204.87320HepG2QKI
TRAF1ENSG00000056558.6113.2369055.284701.034302.735102.03430HepG2RAVER1
TRAF1ENSG00000056558.6272.4103080.099901.7658010.658709.78720HepG2RBM22
TRAF1ENSG00000056558.686.7857051.737100.746201.885601.31910HepG2RBM25
TRAF1ENSG00000056558.6134.3823058.579601.197805.130604.43060HepG2NELFE
TRAF1ENSG00000056558.694.6485054.559800.794602.216001.65720HepG2RECQL
TRAF1ENSG00000056558.6131.9564074.488700.824903.425902.67830HepG2RPLP0
TRAF1ENSG00000056558.6136.0016070.077400.956503.419302.52950HepG2RPS3A
TRAF1ENSG00000056558.679.87510129.43930-0.696502.343201.72330HepG2SF3A3
TRAF1ENSG00000056558.6121.8571054.801001.152804.693203.95420HepG2SF3B4
TRAF1ENSG00000056558.697.9541049.008800.999002.476601.73830HepG2SNRNP70
TRAF1ENSG00000056558.6201.1903090.465201.153007.189806.48630HepG2SRFBP1
TRAF1ENSG00000056558.6126.4216061.974201.028404.149603.41200HepG2SRSF5
TRAF1ENSG00000056558.6203.2469067.963001.5803014.5352013.15840HepG2SRSF7
TRAF1ENSG00000056558.686.9269046.536300.901302.883302.32250HepG2SRSF9
TRAF1ENSG00000056558.6150.1615078.537000.935004.463903.84390HepG2SSB
TRAF1ENSG00000056558.6142.3816051.819601.458106.400905.43600HepG2SUPV3L1
TRAF1ENSG00000056558.681.4721051.218300.669501.805401.33030HepG2TRIM56
TRAF1ENSG00000056558.6125.4464064.892100.950902.475201.68670HepG2UBE2L3
TRAF1ENSG00000056558.656.1521030.620700.874702.109701.44820HepG2UCHL5
TRAF1ENSG00000056558.686.7714047.486700.869602.352501.43370HepG2UPF2
TRAF1ENSG00000056558.6179.13310117.997000.602202.563601.54940HepG2UTP18
TRAF1ENSG00000056558.670.47500110.82850-0.653101.974101.45040HepG2UTP3
TRAF1ENSG00000056558.684.8401051.010300.733901.919901.30880HepG2XRN2
TRAF1ENSG00000056558.654.78800126.25040-1.204406.097205.36810HepG2ZNF622
TRAF1ENSG00000056558.636.462504.826702.917205.620203.52540K562BUD13
TRAF1ENSG00000056558.635.794808.962101.997703.717902.45840K562CCAR1
TRAF1ENSG00000056558.642.4575013.283801.676303.019601.50450K562CKAP4
TRAF1ENSG00000056558.646.5080015.600901.575803.384102.15410K562CPEB4
TRAF1ENSG00000056558.647.3345011.237802.074404.265202.46890K562GEMIN5
TRAF1ENSG00000056558.662.2366013.315002.224606.282104.46850K562IGF2BP2
TRAF1ENSG00000056558.621.070805.658101.896702.243001.50580K562PPIG
TRAF1ENSG00000056558.684.6430021.698301.963706.364803.75700K562PRPF6
TRAF1ENSG00000056558.638.5168012.640901.607302.403901.63960K562SF3A3
TRAF1ENSG00000056558.645.5170012.951301.813203.947902.85040K562SRPK2
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for TRAF1 is not available on ENCORE database.






No RBPs affect the alternative splcing events of TRAF1 on ENCORE database.





The Knockdown/knockout RNA-Seq assay for TRAF1 is not avaliable on ENCORE database.