TP73

General Information

Gene Name       : TP73
Gene ID             : ENSG00000078900.14
Essential Gene : No

Functions

Localization

Domains (AlphaFold: TP73)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878TP73ENSG00000078900.142.166.344.25ENCSR000AEF
HepG2TP73ENSG00000078900.143.100.701.90ENCSR985KAT
K562TP73ENSG00000078900.140.530.080.30ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for TP73 is not avaliable on ENCORE database.



Proteins bound to RNA
  • TP73 RNA is bound by 3 proteins.  







eCLIP assay for TP73 is not avaliable on ENCORE database.





3 proteins are bound to TP73 RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr136394813639537+intron-Distal6.1157613.71529HepG2RBFOX2
chr136395543639726+intron-Distal6.0553310.71477HepG2DROSHA
chr136393143639429+intron-Distal6.2111810.02975HepG2DDX6
chr136393903639481+intron-Distal6.7052720.87939HepG2RBFOX2
chr136394313639509+intron-Distal6.6582513.73594K562DROSHA
chr136394013639496+intron-Distal5.475446.77255HepG2DROSHA
chr136392813639390+intron-Distal6.9708124.83640HepG2RBFOX2
chr136395603639630+intron-Distal5.684146.19827HepG2DDX6
chr136393133639387+intron-Distal5.286144.52980K562DDX6
chr136393073639431+intron-Distal5.8939615.84543K562DROSHA
chr136393873639459+intron-Distal4.642674.86325K562DDX6
chr136393213639527+intron-Distal5.7984811.74926K562RBFOX2
chr136395273639657+intron-Distal4.758566.81444K562RBFOX2
chr136395753639675+intron-Distal6.3692512.64042K562DROSHA
chr136395393639634+intron-Distal4.513984.51679K562DDX6
chr136395373639723+intron-Distal7.4670138.73401HepG2RBFOX2
chr136397493639806+intron-Distal5.265187.16788HepG2RBFOX2
chr136397633639826+intron-Distal,intron-Proximal4.549064.27893HepG2DROSHA
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for TP73 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for TP73 is not available on ENCORE database.

  • 47 RBPs can affect the levels of TP73.  








The Knockdown/knockout RNA-Seq assay for TP73 is not available on ENCORE database.





47 RBPs can affect the gene expression of TP73 :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
TP73ENSG00000078900.10143.1346082.358700.797302.192701.34990HepG2ABCF1
TP73ENSG00000078900.1021.8613056.61410-1.372803.594002.91720HepG2ACO1
TP73ENSG00000078900.105.9176068.14440-3.5255011.4840010.37670HepG2BOP1
TP73ENSG00000078900.1016.9723057.19180-1.752604.190503.26570HepG2CALR
TP73ENSG00000078900.10101.8479052.359500.959803.912902.94180HepG2DDX19B
TP73ENSG00000078900.1015.2077042.16350-1.471202.758701.84770HepG2DDX24
TP73ENSG00000078900.1023.2511071.03970-1.611304.050602.88150HepG2DDX59
TP73ENSG00000078900.10101.0982054.164100.900202.885402.19410HepG2DKC1
TP73ENSG00000078900.1091.3629041.329801.144302.139001.32840HepG2EEF2
TP73ENSG00000078900.1015.2402039.67890-1.380502.423501.39280HepG2AGO1
TP73ENSG00000078900.1069.3924029.858301.216502.884801.96690HepG2GEMIN5
TP73ENSG00000078900.1056.8594021.055501.433103.002902.28440HepG2HNRNPC
TP73ENSG00000078900.1049.1164023.531301.061502.228001.57400HepG2IGF2BP1
TP73ENSG00000078900.10193.6035044.136202.1330014.7535013.29560HepG2MAGOH
TP73ENSG00000078900.10113.1780046.538201.282003.414402.56900HepG2NOL12
TP73ENSG00000078900.1064.7726033.438200.953802.162801.61530HepG2PCBP1
TP73ENSG00000078900.1080.0310027.737801.528605.011403.37370HepG2PKM
TP73ENSG00000078900.1047.9800018.655401.362703.082402.30800HepG2PPIL4
TP73ENSG00000078900.1077.3309034.018701.184603.242402.65940HepG2PTBP1
TP73ENSG00000078900.10109.1140057.665000.920003.455202.78470HepG2PUS1
TP73ENSG00000078900.1047.3623093.19570-0.976503.089802.18800HepG2RBM15
TP73ENSG00000078900.1010.4763066.41200-2.664308.501107.70860HepG2RBM22
TP73ENSG00000078900.1088.1212037.864501.218503.500702.90760HepG2NELFE
TP73ENSG00000078900.10109.4013035.256701.633604.183803.44660HepG2RECQL
TP73ENSG00000078900.107.7861025.73540-1.724802.033801.43710HepG2RPLP0
TP73ENSG00000078900.1049.1803018.626201.400603.175902.49560HepG2SAFB2
TP73ENSG00000078900.1082.9307042.573200.961902.628601.94280HepG2SLBP
TP73ENSG00000078900.1035.0134074.52200-1.089802.280701.57410HepG2SNRNP70
TP73ENSG00000078900.1035.7842075.00690-1.067702.988902.47460HepG2SRFBP1
TP73ENSG00000078900.1012.2510030.07770-1.295801.923201.44700HepG2SRSF9
TP73ENSG00000078900.10159.5044065.118501.292407.763406.98920HepG2SSB
TP73ENSG00000078900.1068.7951020.320401.759305.528504.87040HepG2TIAL1
TP73ENSG00000078900.1033.6192071.11220-1.080802.684902.06460HepG2U2AF1
TP73ENSG00000078900.108.8776038.87030-2.130402.440801.52190HepG2U2AF2
TP73ENSG00000078900.1036.3492083.44830-1.199003.500602.84160HepG2UTP3
TP73ENSG00000078900.1011.3325048.95510-2.111002.349901.37380HepG2XRCC6
TP73ENSG00000078900.10111.0494028.603101.956906.964605.82590HepG2XRN2
TP73ENSG00000078900.1020.8499095.06020-2.1888010.882309.97470HepG2ZNF622
TP73ENSG00000078900.1039.2791085.29470-1.118703.107802.07450K562CELF1
TP73ENSG00000078900.1066.7627036.999300.851402.039601.40570K562EIF2S2
TP73ENSG00000078900.10100.7740027.131801.893003.598402.92930K562HNRNPC
TP73ENSG00000078900.1057.2232024.256601.238102.579301.48310K562HNRNPF
TP73ENSG00000078900.1047.3049021.766801.119802.333201.55730K562MAGOH
TP73ENSG00000078900.1059.9330021.722701.464104.108102.96720K562MATR3
TP73ENSG00000078900.10199.8572065.372601.612105.042403.91980K562PCBP3
TP73ENSG00000078900.10183.4274050.138301.8711013.6821011.96710K562POLR2G
TP73ENSG00000078900.1055.6628024.334301.193602.128801.34610K562PSIP1
TP73ENSG00000078900.1044.3911021.147801.069702.089501.49750K562PTBP1
TP73ENSG00000078900.1028.7539068.51810-1.252703.241302.36190K562SF3A3
TP73ENSG00000078900.1050.4016021.078301.257602.353501.42580K562SRFBP1
TP73ENSG00000078900.10125.7178053.464701.233405.774503.20790K562ZNF800
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for TP73 is not available on ENCORE database.






No RBPs affect the alternative splcing events of TP73 on ENCORE database.





The Knockdown/knockout RNA-Seq assay for TP73 is not avaliable on ENCORE database.