TMEM234

General Information

Gene Name       : TMEM234
Gene ID             : ENSG00000160055.19
Essential Gene : No

Functions

Localization

Domains (AlphaFold: TMEM234)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878TMEM234ENSG00000160055.192.854.083.46ENCSR000AEF
HepG2TMEM234ENSG00000160055.195.975.785.88ENCSR985KAT
K562TMEM234ENSG00000160055.195.244.865.05ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for TMEM234 is not avaliable on ENCORE database.



Proteins bound to RNA
  • TMEM234 RNA is bound by 2 proteins.  







eCLIP assay for TMEM234 is not avaliable on ENCORE database.





2 proteins are bound to TMEM234 RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr13268035632680438-3'-UTR,intron-Distal3.450194.34573HepG2SF3B4
chr13268660032686661-intron-Distal,intron-Proximal3.384433.76553K562PRPF8
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for TMEM234 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for TMEM234 is not available on ENCORE database.

  • 47 RBPs can affect the levels of TMEM234.  








The Knockdown/knockout RNA-Seq assay for TMEM234 is not available on ENCORE database.





47 RBPs can affect the gene expression of TMEM234 :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
TMEM234ENSG00000160055.15233.71100109.803801.089705.434604.71810HepG2AKAP1
TMEM234ENSG00000160055.15152.6718076.345400.999703.032101.94310HepG2AKAP8
TMEM234ENSG00000160055.15120.99010178.38640-0.560102.332601.69330HepG2AUH
TMEM234ENSG00000160055.15124.7004080.946300.623301.836601.34020HepG2BOP1
TMEM234ENSG00000160055.15163.9288093.545200.809203.359102.61650HepG2DDX21
TMEM234ENSG00000160055.15178.70930100.776600.826402.444401.71340HepG2DDX55
TMEM234ENSG00000160055.15163.32170111.436000.551402.058101.46040HepG2DKC1
TMEM234ENSG00000160055.15120.4385062.389900.948803.317002.09820HepG2EFTUD2
TMEM234ENSG00000160055.15154.3260096.855900.672002.228601.60520HepG2FXR1
TMEM234ENSG00000160055.15194.0722089.841001.111005.908304.95200HepG2G3BP1
TMEM234ENSG00000160055.15174.34370109.483900.671103.253102.46440HepG2ILF2
TMEM234ENSG00000160055.15258.69250117.013201.144506.706705.39850HepG2LARP4
TMEM234ENSG00000160055.15183.3028096.889800.919704.021503.23220HepG2MAGOH
TMEM234ENSG00000160055.15280.8073097.429901.5270011.059709.85940HepG2MATR3
TMEM234ENSG00000160055.15166.90960100.666600.729402.622301.83510HepG2MSI2
TMEM234ENSG00000160055.15214.6580079.852101.4265010.829309.88310HepG2PTBP1
TMEM234ENSG00000160055.15221.38790146.562400.595003.226402.59700HepG2PUM1
TMEM234ENSG00000160055.15238.96730146.454600.706301.957401.38730HepG2PUM2
TMEM234ENSG00000160055.15181.1583078.492501.206506.825005.80620HepG2RBM25
TMEM234ENSG00000160055.15224.2357088.871201.335109.295208.40910HepG2NELFE
TMEM234ENSG00000160055.15144.3799082.765100.802703.109102.46090HepG2RECQL
TMEM234ENSG00000160055.15183.85870109.619300.746002.830002.02080HepG2RPS2
TMEM234ENSG00000160055.15183.8631083.143801.144906.496505.65250HepG2SF3B4
TMEM234ENSG00000160055.15160.57810111.305600.528602.083401.51340HepG2SMN1
TMEM234ENSG00000160055.15179.7126088.538301.021203.823402.89840HepG2SNRNP70
TMEM234ENSG00000160055.15170.1532086.781100.971304.563803.99440HepG2SRSF1
TMEM234ENSG00000160055.1531.2618085.61960-1.453503.977402.75440HepG2SRSF3
TMEM234ENSG00000160055.15123.8589070.598400.810903.182102.59890HepG2SRSF9
TMEM234ENSG00000160055.15281.66690155.031800.861306.771205.87310HepG2SUCLG1
TMEM234ENSG00000160055.15232.58690100.303801.213305.533204.62840HepG2SUPV3L1
TMEM234ENSG00000160055.15169.27520104.132500.700903.075002.55230HepG2TIAL1
TMEM234ENSG00000160055.15178.4015091.800800.958403.010901.96370HepG2UPF2
TMEM234ENSG00000160055.15166.72980230.31590-0.466101.973401.41960K562AKAP8L
TMEM234ENSG00000160055.15165.72090241.64620-0.544102.863701.93600K562ATP5C1
TMEM234ENSG00000160055.15154.8937098.925100.646802.375601.64370K562CPSF6
TMEM234ENSG00000160055.15288.58690160.570000.845706.366605.34090K562EIF2S2
TMEM234ENSG00000160055.1527.1332071.27400-1.393303.846702.98240K562G3BP2
TMEM234ENSG00000160055.15216.79780154.764800.486202.162301.37310K562HNRNPU
TMEM234ENSG00000160055.15291.35640156.237800.898905.843104.70020K562HSPD1
TMEM234ENSG00000160055.15141.45840244.44230-0.789104.055803.03090K562KIF1C
TMEM234ENSG00000160055.1595.04670191.93640-1.013904.280803.11140K562NAA15
TMEM234ENSG00000160055.15195.52000279.00500-0.513002.029901.33050K562PUF60
TMEM234ENSG00000160055.15139.24280228.45030-0.714303.058102.49170K562PUS1
TMEM234ENSG00000160055.15135.89950222.55710-0.711603.787203.10930K562RBM15
TMEM234ENSG00000160055.15175.76040113.879300.626002.629901.81180K562RBM22
TMEM234ENSG00000160055.15276.95660157.881500.810705.932104.92510K562UPF1
TMEM234ENSG00000160055.15129.68180231.58420-0.836603.016401.64540K562UTP18
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for TMEM234 is not available on ENCORE database.





14 RBPs can affect the splicing of TMEM234 :

Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
SETMEM234ENSG00000160055.15chr1-326830373268317832682859326829523268673132686798-0.123000.000010.00971excludedK562PUM1
SETMEM234ENSG00000160055.15chr1-3268303732683178326828593268295232686731326867980.369000.000220.02472includedHepG2QKI
SETMEM234ENSG00000160055.15chr1-326830373268317832682859326829523268673132686798-0.357000.000030.00067excludedHepG2U2AF2
SETMEM234ENSG00000160055.15chr1-326830373268317832682859326829523268673132686798-0.116000.000830.07099excludedHepG2SRSF7
SETMEM234ENSG00000160055.15chr1-3268303732683178326828593268295232686731326867980.448000.000080.02054includedHepG2TIA1
SETMEM234ENSG00000160055.15chr1-326830373268317832682859326829523268673132686798-0.130000.000510.08424excludedK562APOBEC3C
SETMEM234ENSG00000160055.15chr1-3268303732683178326828593268295232686731326867980.253000.000590.08313includedHepG2RBM15
SETMEM234ENSG00000160055.15chr1-326830373268317832682859326829523268673132686798-0.158000.000800.05766excludedHepG2TIAL1
SETMEM234ENSG00000160055.15chr1-3268303732683178326828593268295232686731326867980.393000.001000.08652includedHepG2TAF15
SETMEM234ENSG00000160055.15chr1-326830373268317832682859326829523268673132686798-0.285000.004420.06559excludedK562U2AF2
SETMEM234ENSG00000160055.15chr1-3268303732683178326828593268295232686731326867980.413000.000060.00501includedK562HNRNPK
SETMEM234ENSG00000160055.15chr1-326830373268317832682859326829523268673132686798-0.170000.001580.05549excludedHepG2HNRNPC
SETMEM234ENSG00000160055.15chr1-326830373268317832682859326829523268673132686798-0.114000.001690.02962excludedK562HNRNPC
A3SSTMEM234ENSG00000160055.15chr1-3268285932683000326828593268295232686731326867980.254000.010300.05425longerK562AQR
RITMEM234ENSG00000160055.15chr1-326817973268295232681797326825483268285932682952-0.561000.001440.06415excludedK562NCBP2
RITMEM234ENSG00000160055.15chr1-326807363268139632680736326808173268127332681396-0.738000.000090.01907excludedK562HNRNPL

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".





The Knockdown/knockout RNA-Seq assay for TMEM234 is not avaliable on ENCORE database.