RP11-77H9.2

General Information

Gene Name : RP11-77H9.2
Gene ID :
Essential Gene : No

Functions

Not Available

Localization

Not Available

Domains (AlphaFold: RP11-77H9.2)

Not Available

Antibody Validation

Not Avaiable

Expression Level in Cell lines

Cell Line	Gene Name	Ensembl ID	Rep1 TPM	Rep2 TPM	Average TPM	Experiment ID

Assays

0 Released experiments are available on ENCORE database.

eCLIP

No eCLIP experiment available

Antibody Validation

No Antibody Primary Validation image or Secondary image available

KD RNA-Seq

No KD RNA-Seq experiment available

RNA Bind-n-Seqn

No RBNS experiment available

Localization Image in HepG2

No Localization Information available

RBP	Antibody Info	Primary-HepG2	Secondary-HepG2	Primary-K562	Secondary-K562	Primary-UBERON	Primary-Hela

Summary
Proteins Bound to RBP RNA

RNA Targets

eCLIP assay for RP11-77H9.2 is not avaliable on ENCORE database.

Proteins bound to RNA

RP11-77H9.2 RNA is bound by 16 proteins.

eCLIP assay for RP11-77H9.2 is not avaliable on ENCORE database.

16 proteins are bound to RP11-77H9.2 RNA:

Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name
chr16	8946310	8946388	+	intron-Distal	3.12586	5.85567	HepG2	ILF3
chr16	8948436	8948508	+	intron-Distal	3.78083	5.37989	HepG2	HNRNPK
chr16	8947367	8947418	+	intron-Distal	4.63125	14.57711	HepG2	U2AF2
chr16	8949334	8949398	+	intron-Distal	3.61350	5.34579	HepG2	HNRNPK
chr16	8947398	8947520	+	intron-Distal,intron-Proximal	3.85496	5.52342	HepG2	PPIG
chr16	8945871	8945915	+	intron-Distal	3.22513	7.31475	HepG2	HNRNPC
chr16	8943923	8943985	+	intron-Distal,intron-Proximal	3.89301	3.24831	HepG2	TIA1
chr16	8952297	8952447	+	intron-Distal	3.07474	3.33316	HepG2	SLTM
chr16	8946213	8946267	+	intron-Distal	4.36653	13.25143	HepG2	ILF3
chr16	8951888	8951919	+	intron-Distal	3.04870	7.92053	HepG2	HNRNPL
chr16	8953139	8953236	+	intron-Distal	3.46985	3.12654	K562	SLTM
chr16	8945755	8945800	+	intron-Distal	3.20483	5.36578	HepG2	HNRNPK
chr16	8945858	8945871	+	intron-Distal	3.24843	6.64486	HepG2	HNRNPC
chr16	8953151	8953257	+	intron-Distal	3.05395	7.11462	HepG2	SLTM
chr16	8953138	8953216	+	intron-Distal	3.37520	6.51348	HepG2	CSTF2T
chr16	8946162	8946184	+	intron-Distal	4.00941	10.10830	HepG2	ILF3
chr16	8946184	8946213	+	intron-Distal	4.02022	11.57797	HepG2	ILF3
chr16	8943933	8944004	+	intron-Distal,intron-Proximal	4.43857	5.73042	K562	TIA1
chr16	8946086	8946145	+	intron-Distal	4.61556	7.00410	HepG2	ILF3
chr16	8943869	8943978	+	intron-Distal,intron-Proximal	3.69276	9.59042	K562	PRPF8
chr16	8943882	8943951	+	intron-Distal,intron-Proximal	4.55314	29.37729	HepG2	PRPF8
chr16	8946893	8946948	+	intron-Distal	3.58819	7.20917	HepG2	HNRNPK
chr16	8946157	8946254	+	intron-Distal	3.35511	3.85034	K562	ILF3
chr16	8945060	8945131	+	intron-Distal	3.92117	7.32838	HepG2	HNRNPC
chr16	8951919	8951977	+	intron-Distal	3.36074	9.92151	HepG2	HNRNPL
chr16	8943922	8944001	+	intron-Distal,intron-Proximal	3.66978	4.96262	HepG2	TIAL1
chr16	8943501	8943513	+	intron-Proximal	3.73205	8.10600	HepG2	PPIG
chr16	8943682	8943736	+	intron-Proximal	3.87220	3.18234	K562	BUD13
chr16	8948827	8948922	+	intron-Proximal	5.24445	6.91748	K562	SF3B4
chr16	8943563	8943604	+	intron-Proximal	3.75999	11.02146	HepG2	XPO5
chr16	8943512	8943565	+	intron-Proximal	4.27278	3.63072	HepG2	AQR
chr16	8943605	8943677	+	intron-Proximal	3.41319	8.57214	HepG2	SF3B4
chr16	8943805	8943863	+	intron-Proximal	3.31510	5.25550	HepG2	SRSF7
chr16	8948960	8949076	+	intron-Proximal	3.04894	12.37359	HepG2	PPIG
chr16	8943538	8943563	+	intron-Proximal	4.25274	10.70275	HepG2	XPO5
chr16	8948822	8948891	+	intron-Proximal	4.51456	7.83068	HepG2	SF3B4
chr16	8943509	8943549	+	intron-Proximal	3.64272	8.43093	HepG2	PRPF8
Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name

eCLIP assay for RP11-77H9.2 is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout assay for RP11-77H9.2 is not available on ENCORE database.
40 RBPs can affect the levels of RP11-77H9.2.

The Knockdown/knockout RNA-Seq assay for RP11-77H9.2 is not available on ENCORE database.

40 RBPs can affect the gene expression of RP11-77H9.2 :

Gene Name	Gene ID	KDMean	CNMean	log2(fold change) *	-log(pval) **	-log(padj) **	Cell Line	Affected by RBP	Bound by RBP
RP11-77H9.2	ENSG00000260276.1	177.15290	101.76740	0.79960	2.03940	1.45640	HepG2	CKAP4
RP11-77H9.2	ENSG00000260276.1	167.84100	84.75800	0.98560	5.80520	4.93970	HepG2	CELF1
RP11-77H9.2	ENSG00000260276.1	201.37420	91.10110	1.14420	7.90770	6.75010	HepG2	DAZAP1
RP11-77H9.2	ENSG00000260276.1	36.10710	72.51670	-1.00600	2.64460	1.31940	HepG2	DDX52
RP11-77H9.2	ENSG00000260276.1	97.96930	53.41030	0.87510	3.19200	2.49970	HepG2	DNAJC2
RP11-77H9.2	ENSG00000260276.1	275.31160	77.79310	1.82330	15.67540	14.33550	HepG2	EIF2S1
RP11-77H9.2	ENSG00000260276.1	168.78740	85.99000	0.97290	3.51440	2.79600	HepG2	EIF4A3
RP11-77H9.2	ENSG00000260276.1	244.89990	83.68610	1.54900	9.36710	8.13970	HepG2	EIF4B
RP11-77H9.2	ENSG00000260276.1	41.31000	91.51690	-1.14750	3.39980	2.19430	HepG2	ESF1
RP11-77H9.2	ENSG00000260276.1	162.13580	99.47110	0.70480	2.90200	2.04820	HepG2	EWSR1
RP11-77H9.2	ENSG00000260276.1	147.75960	83.74120	0.81910	3.80330	2.73440	HepG2	HNRNPA2B1
RP11-77H9.2	ENSG00000260276.1	248.71560	81.39970	1.61130	6.94320	5.87360	HepG2	HNRNPK
RP11-77H9.2	ENSG00000260276.1	197.99060	82.97560	1.25460	9.93490	8.73350	HepG2	HNRNPL
RP11-77H9.2	ENSG00000260276.1	123.24550	74.74510	0.72140	2.12770	1.40740	HepG2	LARP4
RP11-77H9.2	ENSG00000260276.1	182.86070	86.73130	1.07600	2.00290	1.44080	HepG2	MAGOH
RP11-77H9.2	ENSG00000260276.1	267.17920	129.25750	1.04750	5.13820	3.89840	HepG2	PABPC1
RP11-77H9.2	ENSG00000260276.1	131.51230	82.01270	0.68120	2.44370	1.92410	HepG2	PTBP1
RP11-77H9.2	ENSG00000260276.1	187.43050	91.56370	1.03340	7.43180	6.55690	HepG2	PUM1
RP11-77H9.2	ENSG00000260276.1	156.03010	91.48990	0.77000	3.45860	2.71250	HepG2	PUM2
RP11-77H9.2	ENSG00000260276.1	165.67310	88.82750	0.89920	3.97600	3.24570	HepG2	QKI
RP11-77H9.2	ENSG00000260276.1	50.76080	167.35570	-1.72110	5.30160	4.64210	HepG2	RBM22
RP11-77H9.2	ENSG00000260276.1	55.76460	91.27450	-0.71090	1.78970	1.33450	HepG2	NELFE
RP11-77H9.2	ENSG00000260276.1	46.49430	105.33970	-1.17990	4.47300	3.60460	HepG2	SF3A3
RP11-77H9.2	ENSG00000260276.1	128.12930	82.71820	0.63120	2.47630	1.80710	HepG2	SLBP
RP11-77H9.2	ENSG00000260276.1	123.39850	66.53930	0.89090	3.13520	2.10760	HepG2	SMNDC1
RP11-77H9.2	ENSG00000260276.1	53.69410	89.12740	-0.73110	1.73330	1.33460	HepG2	SRSF1
RP11-77H9.2	ENSG00000260276.1	146.69670	94.51960	0.63410	2.01440	1.41010	HepG2	SRSF7
RP11-77H9.2	ENSG00000260276.1	72.46690	140.12550	-0.95130	2.41230	1.41380	HepG2	TBRG4
RP11-77H9.2	ENSG00000260276.1	154.08740	58.92890	1.38660	9.01730	8.08990	HepG2	TRIM56
RP11-77H9.2	ENSG00000260276.1	164.17660	89.21650	0.87980	3.04470	2.16900	HepG2	UBE2L3
RP11-77H9.2	ENSG00000260276.1	232.29890	90.19400	1.36480	11.26350	10.18640	HepG2	UTP3
RP11-77H9.2	ENSG00000260276.1	56.42430	102.42110	-0.86010	2.20560	1.68930	K562	AGGF1
RP11-77H9.2	ENSG00000260276.1	231.78720	57.76130	2.00450	15.51490	14.27860	K562	AQR
RP11-77H9.2	ENSG00000260276.1	90.00550	49.83890	0.85260	2.47690	1.43350	K562	CPEB4
RP11-77H9.2	ENSG00000260276.1	197.50210	120.31570	0.71490	2.49390	1.56870	K562	CELF1
RP11-77H9.2	ENSG00000260276.1	109.89740	56.25020	0.96610	3.61870	2.21540	K562	EIF2S1
RP11-77H9.2	ENSG00000260276.1	166.42960	53.50950	1.63690	9.77900	8.22580	K562	EIF4A3
RP11-77H9.2	ENSG00000260276.1	107.04220	46.59690	1.19980	4.10890	2.79450	K562	HNRNPL
RP11-77H9.2	ENSG00000260276.1	68.73230	126.71830	-0.88260	2.35910	1.52920	K562	MBNL1
RP11-77H9.2	ENSG00000260276.1	96.42620	58.52450	0.72030	2.07430	1.36880	K562	MTPAP
RP11-77H9.2	ENSG00000260276.1	89.29320	35.71900	1.32180	2.85030	1.37770	K562	PPP1R8
RP11-77H9.2	ENSG00000260276.1	197.30460	106.77140	0.88580	4.48820	3.45430	K562	PUF60
RP11-77H9.2	ENSG00000260276.1	87.48670	33.47810	1.38570	3.27470	1.81080	K562	SFPQ
RP11-77H9.2	ENSG00000260276.1	106.56240	68.93410	0.62830	1.91360	1.30820	K562	UPF1
Gene Name	Gene ID	KDMean	CNMean	log2(fold change)	-log(pval)	-log(padj)	Cell Line	Affected by RBP	Bound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

The Knockdown/knockout RNA-Seq assay for RP11-77H9.2 is not available on ENCORE database.

11 RBPs can affect the splicing of RP11-77H9.2 :

Event Type	Gene Name	Gene ID	chr	Strand	ExonStart	ExonEnd	2ndExonStart	2ndExonEnd	upstreamES	upstreamEE	downstreamES	downstreamEE	dPSI	p-value	FDR	is_included	Cell Line	Affected by RBP
SE	RP11-77H9.2	ENSG00000260276.1	chr16	+	8944789	8944907			8943705	8943850	8948890	8949074	-0.16100	0.00134	0.03413	excluded	HepG2	HNRNPK
SE	RP11-77H9.2	ENSG00000260276.1	chr16	+	8944789	8944907			8943705	8943850	8948890	8949074	-0.28400	0.00458	0.04323	excluded	K562	AQR
MXE	RP11-77H9.2	ENSG00000260276.1	chr16	+	8944789	8944907	8947382	8947493	8943705	8943850	8948890	8949074	-0.16800	0.00007	0.00327	2included	HepG2	MATR3
MXE	RP11-77H9.2	ENSG00000260276.1	chr16	+	8944789	8944907	8947382	8947493	8943705	8943850	8948890	8949074	-0.19700	0.00014	0.01971	2included	HepG2	UCHL5
MXE	RP11-77H9.2	ENSG00000260276.1	chr16	+	8944789	8944907	8947382	8947493	8943705	8943850	8948890	8949074	-0.21600	0.00035	0.02922	2included	HepG2	IGF2BP3
MXE	RP11-77H9.2	ENSG00000260276.1	chr16	+	8944789	8944907	8947382	8947493	8943705	8943850	8948890	8949074	-0.23200	0.00000	0.00025	2included	HepG2	BCCIP
MXE	RP11-77H9.2	ENSG00000260276.1	chr16	+	8944789	8944907	8947382	8947493	8943705	8943850	8948890	8949074	-0.16600	0.00017	0.00903	2included	HepG2	XRN2
MXE	RP11-77H9.2	ENSG00000260276.1	chr16	+	8944789	8944907	8947382	8947493	8943705	8943850	8948890	8949074	-0.32600	0.00000	0.00000	2included	HepG2	DDX55
MXE	RP11-77H9.2	ENSG00000260276.1	chr16	+	8944789	8944907	8947382	8947493	8943705	8943850	8948890	8949074	0.54200	0.00078	0.00660	1included	HepG2	U2AF2
MXE	RP11-77H9.2	ENSG00000260276.1	chr16	+	8944789	8944907	8947382	8947493	8943705	8943850	8948890	8949074	-0.17800	0.00004	0.00406	2included	HepG2	AKAP1
MXE	RP11-77H9.2	ENSG00000260276.1	chr16	+	8944789	8944907	8947382	8947493	8943705	8943850	8948890	8949074	0.14000	0.00111	0.09625	1included	HepG2	ILF3

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

RP11-77H9.2

General Information

Functions

Localization

Domains (AlphaFold: RP11-77H9.2)

Antibody Validation

Expression Level in Cell lines

Assays

RNA Targets

Proteins bound to RNA

eCLIP assay for RP11-77H9.2 is not avaliable on ENCORE database.

16 proteins are bound to RP11-77H9.2 RNA:

eCLIP assay for RP11-77H9.2 is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout RNA-Seq assay for RP11-77H9.2 is not available on ENCORE database.

40 RBPs can affect the gene expression of RP11-77H9.2 :

The Knockdown/knockout RNA-Seq assay for RP11-77H9.2 is not available on ENCORE database.

11 RBPs can affect the splicing of RP11-77H9.2 :

The Knockdown/knockout RNA-Seq assay for RP11-77H9.2 is not avaliable on ENCORE database.