NARFL

General Information

Gene Name       : NARFL
Gene ID             :
Essential Gene : No

Functions

Localization

Domains (AlphaFold: NARFL)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for NARFL is not avaliable on ENCORE database.



Proteins bound to RNA
  • NARFL RNA is bound by 13 proteins.  







eCLIP assay for NARFL is not avaliable on ENCORE database.





13 proteins are bound to NARFL RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr16779900780063-3'-UTR,intron-Distal,intron-Proximal3.672054.66086HepG2AKAP1
chr16779922780108-3'-UTR,intron-Distal,intron-Proximal5.7088512.83360HepG2UPF1
chr16784733784822-3'-UTR,CDS,intron-Distal,intron-Proximal3.347413.05161HepG2PPIG
chr16780040780094-3'-UTR,intron-Distal,intron-Proximal4.447413.20319K562UPF1
chr16780108780313-3'-UTR,intron-Distal,intron-Proximal4.8016513.32127HepG2UPF1
chr16782359782467-3'-UTR,CDS,intron-Distal,intron-Proximal4.626016.12902HepG2SF3B4
chr16780183780329-3'-UTR,intron-Distal,intron-Proximal3.585605.03349HepG2AKAP1
chr16782313782429-3'-UTR,CDS,intron-Distal,intron-Proximal3.866166.06009K562BUD13
chr16779948780006-3'-UTR,intron-Distal,intron-Proximal4.021823.61671HepG2PABPN1
chr16781568781640-3'-UTR,CDS,intron-Distal4.267183.79199HepG2PPIG
chr16783252783304-3'-UTR,CDS,intron-Distal,intron-Proximal3.493166.74268HepG2PRPF8
chr16782305782369-3'-UTR,CDS,intron-Distal,intron-Proximal3.877163.86355HepG2PPIG
chr16782303782388-3'-UTR,CDS,intron-Distal,intron-Proximal4.206366.01372K562AQR
chr16780934781004-3'-UTR,CDS,intron-Distal,intron-Proximal4.590125.56813HepG2PPIG
chr16790919790985-5'-UTR,CDS,intron-Distal,intron-Proximal5.512344.97000K562DDX3X
chr16789629789740-5'-UTR,CDS,intron-Distal,intron-Proximal3.105633.63043HepG2GRWD1
chr16784693784738-CDS,intron-Distal,intron-Proximal4.932626.04760K562AQR
chr16784326784376-CDS,intron-Distal,intron-Proximal4.181374.98250K562AQR
chr16782374782441-intron-Distal,intron-Proximal5.795908.30797HepG2SF3A3
chr16783465783531-intron-Distal,intron-Proximal4.580423.55086HepG2RBM5
chr16784061784121-intron-Distal,intron-Proximal3.569066.93856HepG2RBM5
chr16783818783879-intron-Distal,intron-Proximal3.331823.02792HepG2RBFOX2
chr16783249783298-intron-Distal,intron-Proximal4.9921111.12698K562AQR
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for NARFL is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for NARFL is not available on ENCORE database.

  • 72 RBPs can affect the levels of NARFL.  








The Knockdown/knockout RNA-Seq assay for NARFL is not available on ENCORE database.





72 RBPs can affect the gene expression of NARFL :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
NARFLENSG00000103245.9373.69960292.598700.352902.012701.34460HepG2AKAP8L
NARFLENSG00000103245.9335.40870162.924901.041605.933904.53440HepG2BCCIP
NARFLENSG00000103245.9230.59320132.437700.799904.098803.38640HepG2BOP1
NARFLENSG00000103245.9638.33420291.171601.1323016.3131014.98370HepG2CKAP4
NARFLENSG00000103245.9173.93410110.634400.652602.850601.81770HepG2YBX3
NARFLENSG00000103245.9182.03670108.633300.744703.694802.88900HepG2DNAJC21
NARFLENSG00000103245.9200.88370107.676000.899606.116005.20280HepG2DNAJC2
NARFLENSG00000103245.9406.49920256.496700.664203.076102.45220HepG2EIF2S1
NARFLENSG00000103245.9253.00620152.459100.730703.543701.95490HepG2HNRNPAB
NARFLENSG00000103245.9400.48830268.935000.574402.913002.19600HepG2HNRNPK
NARFLENSG00000103245.9281.34660194.177700.534903.128202.41420HepG2HNRNPL
NARFLENSG00000103245.9198.49620131.507800.593902.129201.56930HepG2HNRNPLL
NARFLENSG00000103245.9231.67790121.186200.934806.629405.72660HepG2HNRNPU
NARFLENSG00000103245.9291.78150204.788200.510702.628501.92220HepG2IGF2BP1
NARFLENSG00000103245.9180.81050123.787600.546502.605201.89140HepG2ILF2
NARFLENSG00000103245.9285.50580175.929100.698403.279601.95490HepG2KHDRBS1
NARFLENSG00000103245.9391.10390286.245100.450202.045901.47800HepG2MAGOH
NARFLENSG00000103245.9441.14630294.562200.582603.248102.56380HepG2NCBP2
NARFLENSG00000103245.9346.78960211.401800.714003.085202.28010HepG2NOL12
NARFLENSG00000103245.9276.14680147.147700.908103.345302.13510HepG2NONO
NARFLENSG00000103245.9269.66950168.641900.677102.580001.72990HepG2PABPC1
NARFLENSG00000103245.9204.73690108.088300.921505.835904.79760HepG2PPIL4
NARFLENSG00000103245.9377.98470264.082000.517203.474702.87670HepG2PTBP1
NARFLENSG00000103245.9415.05290201.821101.0401010.790309.71670HepG2PUF60
NARFLENSG00000103245.9438.16570285.958600.615602.409201.81990HepG2QKI
NARFLENSG00000103245.9263.62710159.807300.722102.907601.81850HepG2RCC2
NARFLENSG00000103245.9356.54420273.742700.381202.167501.61300HepG2RECQL
NARFLENSG00000103245.9278.69040181.488600.618702.751601.95290HepG2RPS2
NARFLENSG00000103245.9233.14020107.921301.111103.816803.08100HepG2SAFB2
NARFLENSG00000103245.9449.64500299.835000.584503.146702.42840HepG2SF3A3
NARFLENSG00000103245.9445.84350274.902400.697506.469005.62670HepG2SF3B4
NARFLENSG00000103245.9300.98640193.562000.636802.653201.96380HepG2SLBP
NARFLENSG00000103245.9214.29500125.853800.767704.571703.78020HepG2SMN1
NARFLENSG00000103245.9192.77980286.95540-0.573903.107202.61390HepG2SRSF1
NARFLENSG00000103245.9362.71020199.296400.863808.854407.81700HepG2SRSF5
NARFLENSG00000103245.9294.30730161.320200.867305.263503.70250HepG2STIP1
NARFLENSG00000103245.9327.00070226.631400.528804.001703.27810HepG2SUCLG1
NARFLENSG00000103245.9182.93310257.97310-0.495902.287201.76920HepG2TAF15
NARFLENSG00000103245.9270.42690117.752501.199409.987009.14030HepG2TIAL1
NARFLENSG00000103245.9219.35430118.807800.884506.035305.25900HepG2TRIM56
NARFLENSG00000103245.9302.12900197.208100.615303.854002.80320HepG2TUFM
NARFLENSG00000103245.9153.1993094.189000.701702.070201.41320HepG2UCHL5
NARFLENSG00000103245.9243.67810145.981100.739102.426001.49050HepG2UPF2
NARFLENSG00000103245.9274.36060166.057400.724303.561302.30970HepG2XPO5
NARFLENSG00000103245.9279.68630156.972000.833203.902803.05060HepG2XRN2
NARFLENSG00000103245.9355.54680223.666300.668604.874603.58180K562BCLAF1
NARFLENSG00000103245.9251.18410169.684300.565802.657201.62220K562CSTF2
NARFLENSG00000103245.9582.14480749.92740-0.365402.327501.43390K562CELF1
NARFLENSG00000103245.9410.13940271.874800.593104.188902.86840K562DDX3X
NARFLENSG00000103245.9500.69640380.099400.397502.964502.29200K562DDX47
NARFLENSG00000103245.9271.65630173.516500.646602.521001.30800K562EEF2
NARFLENSG00000103245.9383.21660167.607701.193009.877808.05110K562EFTUD2
NARFLENSG00000103245.9526.43610393.644700.419302.322201.65490K562EIF2S2
NARFLENSG00000103245.9312.56140207.262500.592603.339002.40010K562FIP1L1
NARFLENSG00000103245.923.3875087.03060-1.895804.330503.40230K562G3BP2
NARFLENSG00000103245.9234.21210139.626700.746103.777202.85570K562GPKOW
NARFLENSG00000103245.9736.02800524.489800.488702.049701.39290K562GRSF1
NARFLENSG00000103245.9351.15660235.690600.575103.194502.55900K562HNRNPC
NARFLENSG00000103245.9269.03980170.493900.658003.196902.19180K562HNRNPM
NARFLENSG00000103245.9446.15980280.979200.667004.775603.73730K562HSPD1
NARFLENSG00000103245.9290.11140170.615200.765803.890202.58780K562IGF2BP2
NARFLENSG00000103245.9263.88470179.089900.559102.125701.38470K562MAGOH
NARFLENSG00000103245.9203.69500136.295300.579602.466201.64400K562METAP2
NARFLENSG00000103245.9254.87500165.327100.624402.659001.40270K562NONO
NARFLENSG00000103245.9261.72820159.305500.716202.979401.96540K562PCBP2
NARFLENSG00000103245.9408.48340235.309300.795606.411205.07260K562PPIG
NARFLENSG00000103245.9333.78400163.103401.033006.988805.79760K562PRPF8
NARFLENSG00000103245.9308.30340211.349100.544602.321301.49880K562PSIP1
NARFLENSG00000103245.9365.77200174.013501.071606.901005.88720K562PTBP1
NARFLENSG00000103245.9357.91250469.13830-0.390401.871501.40780K562PUS1
NARFLENSG00000103245.9277.35720166.086100.739703.343802.44460K562RPS19
NARFLENSG00000103245.9182.3651090.385301.012605.949404.66110K562SF3B4
NARFLENSG00000103245.9272.88590161.195000.759403.029001.92010K562SRSF5
NARFLENSG00000103245.9246.25290157.824500.641702.642801.65020K562SUPV3L1
NARFLENSG00000103245.9409.77140172.621301.2471012.2165010.54170K562TARDBP
NARFLENSG00000103245.9358.99020166.526701.1081010.624808.90210K562TIA1
NARFLENSG00000103245.9256.89840163.538200.651502.282801.31200K562TRA2A
NARFLENSG00000103245.9277.43950167.085200.731503.735502.53530K562UCHL5
NARFLENSG00000103245.9290.64290170.214400.771803.561802.12590K562XRN2
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for NARFL is not available on ENCORE database.





2 RBPs can affect the splicing of NARFL :

Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
SENARFLENSG00000103245.9chr16-7900217901037896427897387909197909970.229000.000110.02472includedK562NSUN2
SENARFLENSG00000103245.9chr16-7900217901037896427897387909197909970.189000.000620.09021includedK562UPF1

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".





The Knockdown/knockout RNA-Seq assay for NARFL is not avaliable on ENCORE database.