HAPLN3

General Information

Gene Name       : HAPLN3
Gene ID             : ENSG00000140511.11
Essential Gene : No

Functions

Localization

Domains (AlphaFold: HAPLN3)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878HAPLN3ENSG00000140511.110.010.360.18ENCSR000AEF
HepG2HAPLN3ENSG00000140511.110.260.030.15ENCSR985KAT
K562HAPLN3ENSG00000140511.110.720.400.56ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for HAPLN3 is not avaliable on ENCORE database.



Proteins bound to RNA
  • HAPLN3 RNA is bound by 2 proteins.  







eCLIP assay for HAPLN3 is not avaliable on ENCORE database.





2 proteins are bound to HAPLN3 RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr158943310789433205-intron-Distal4.291134.05367K562ILF3
chr158943799889438090-intron-Distal5.054059.08542K562CSTF2T
chr158943844489438577-intron-Distal3.289096.12137K562CSTF2T
chr158943310789433204-intron-Distal4.059383.43867K562CSTF2T
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for HAPLN3 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for HAPLN3 is not available on ENCORE database.

  • 44 RBPs can affect the levels of HAPLN3.  








The Knockdown/knockout RNA-Seq assay for HAPLN3 is not available on ENCORE database.





44 RBPs can affect the gene expression of HAPLN3 :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
HAPLN3ENSG00000140511.710.396300.515704.333301.891501.30830HepG2HNRNPK
HAPLN3ENSG00000140511.737.108102.623603.822007.293606.58610HepG2SRFBP1
HAPLN3ENSG00000140511.772.4552028.778301.332003.574702.16530K562ABCF1
HAPLN3ENSG00000140511.7124.6657061.280601.024504.147603.47740K562AGGF1
HAPLN3ENSG00000140511.7111.1654063.764900.801802.577001.94550K562AKAP8L
HAPLN3ENSG00000140511.7198.9242075.971301.388607.865206.95990K562AQR
HAPLN3ENSG00000140511.777.6363027.430401.500904.866803.57500K562BCLAF1
HAPLN3ENSG00000140511.797.7664024.800501.978907.526106.06030K562BOP1
HAPLN3ENSG00000140511.798.0613050.337800.961902.820801.37510K562CKAP4
HAPLN3ENSG00000140511.760.2455026.366401.192102.662001.89210K562CPSF6
HAPLN3ENSG00000140511.784.0829020.810002.014406.925805.14080K562CSTF2
HAPLN3ENSG00000140511.728.9837058.55460-1.014502.275301.67570K562DDX47
HAPLN3ENSG00000140511.772.0531024.936701.530703.961302.85420K562EFTUD2
HAPLN3ENSG00000140511.712.7095032.71570-1.364102.268701.54310K562EIF3G
HAPLN3ENSG00000140511.789.9966050.058600.846202.555301.34330K562EXOSC5
HAPLN3ENSG00000140511.793.3497026.834201.798506.616405.27320K562FMR1
HAPLN3ENSG00000140511.767.0066022.747501.558502.445801.58860K562FTO
HAPLN3ENSG00000140511.794.9324025.170501.915107.314506.02340K562GPKOW
HAPLN3ENSG00000140511.7129.1141034.026101.923809.628108.56910K562HNRNPC
HAPLN3ENSG00000140511.7217.6879039.458602.4638014.6925011.79710K562HNRNPK
HAPLN3ENSG00000140511.734.2405065.44700-0.934602.230201.42860K562HNRNPU
HAPLN3ENSG00000140511.788.2974024.570501.845306.632905.24710K562METAP2
HAPLN3ENSG00000140511.7179.4005085.049101.076702.774001.64370K562MSI2
HAPLN3ENSG00000140511.7104.0194040.224901.370605.685904.67180K562NSUN2
HAPLN3ENSG00000140511.798.0270050.024400.970402.560801.38660K562PABPC1
HAPLN3ENSG00000140511.7160.5122040.551801.9847014.3618011.46560K562PCBP1
HAPLN3ENSG00000140511.761.6177023.501701.390503.661702.69860K562PPIG
HAPLN3ENSG00000140511.772.1785030.506501.242403.163202.18760K562PSIP1
HAPLN3ENSG00000140511.7156.7927087.060800.848702.685801.88100K562PUF60
HAPLN3ENSG00000140511.7130.1771063.239601.041503.891303.26280K562PUS1
HAPLN3ENSG00000140511.7119.1013061.615600.950703.564402.90490K562RBM15
HAPLN3ENSG00000140511.7130.5751038.690901.7547010.098408.33690K562RBM22
HAPLN3ENSG00000140511.781.1329022.615301.842907.085604.84770K562RBM25
HAPLN3ENSG00000140511.7244.9056055.889902.1315010.490607.10110K562RBM39
HAPLN3ENSG00000140511.7158.0214039.525501.9992011.6748010.22930K562SRSF1
HAPLN3ENSG00000140511.767.5367024.824701.443803.906202.37480K562STAU1
HAPLN3ENSG00000140511.762.1368023.449801.405802.772001.75540K562SUPV3L1
HAPLN3ENSG00000140511.719.9836048.98740-1.293602.792001.96830K562SYNCRIP
HAPLN3ENSG00000140511.7161.2320040.013602.010505.050304.07900K562TARDBP
HAPLN3ENSG00000140511.776.2728024.841801.618304.044402.78840K562UCHL5
HAPLN3ENSG00000140511.7112.6000042.651501.400402.934602.19470K562UPF1
HAPLN3ENSG00000140511.791.6762040.014801.195902.430101.31220K562UTP3
HAPLN3ENSG00000140511.767.1517036.495100.879602.122101.35710K562WDR3
HAPLN3ENSG00000140511.761.5664025.332301.281102.619701.45330K562XRN2
HAPLN3ENSG00000140511.7166.4126085.567800.959504.926003.72130K562ZC3H8
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for HAPLN3 is not available on ENCORE database.






No RBPs affect the alternative splcing events of HAPLN3 on ENCORE database.





The Knockdown/knockout RNA-Seq assay for HAPLN3 is not avaliable on ENCORE database.