FXYD3

General Information

Gene Name       : FXYD3
Gene ID             : ENSG00000089356.18
Essential Gene : No

Functions

Localization

Domains (AlphaFold: FXYD3)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878FXYD3ENSG00000089356.180.000.000.00ENCSR000AEF
HepG2FXYD3ENSG00000089356.180.440.420.43ENCSR985KAT
K562FXYD3ENSG00000089356.180.000.000.00ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for FXYD3 is not avaliable on ENCORE database.



Proteins bound to RNA

  • NO known proteins bind on FXYD3 RNA with finished eCLIP experiments on ENCORE database.





eCLIP assay for FXYD3 is not avaliable on ENCORE database.






NO known proteins are bound to FXYD3 RNA with finished eCLIP experiments on ENCORE database.





eCLIP assay for FXYD3 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for FXYD3 is not available on ENCORE database.

  • 61 RBPs can affect the levels of FXYD3.  








The Knockdown/knockout RNA-Seq assay for FXYD3 is not available on ENCORE database.





61 RBPs can affect the gene expression of FXYD3 :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
FXYD3ENSG00000089356.122.2787017.12340-2.909702.642401.59230HepG2AATF
FXYD3ENSG00000089356.121.8060015.25360-3.078302.912702.29140HepG2ACO1
FXYD3ENSG00000089356.122.0389088.58990-5.4413019.8959018.60410HepG2AKAP1
FXYD3ENSG00000089356.12131.5240069.638700.917303.197802.36850HepG2CIRBP
FXYD3ENSG00000089356.127.6997039.54350-2.360604.433503.46070HepG2CNOT7
FXYD3ENSG00000089356.1243.116801.992004.435909.483508.28330HepG2CPSF6
FXYD3ENSG00000089356.124.2455027.35940-2.688003.993503.24720HepG2CELF1
FXYD3ENSG00000089356.12239.9050084.855701.4993010.222909.08710HepG2DDX3X
FXYD3ENSG00000089356.1251.847509.120502.507006.682505.16860HepG2DDX5
FXYD3ENSG00000089356.1261.899407.985702.954305.499804.53840HepG2DNAJC21
FXYD3ENSG00000089356.12345.8330070.073202.3030025.9535024.26790HepG2EIF2S1
FXYD3ENSG00000089356.1241.0363077.43150-0.916002.148101.58230HepG2EIF4A3
FXYD3ENSG00000089356.123.8276075.40480-4.3001013.3216011.87760HepG2EIF4B
FXYD3ENSG00000089356.1272.1608027.802401.375903.918602.95940HepG2EIF4G2
FXYD3ENSG00000089356.1217.2506062.98640-1.868405.283004.20710HepG2FUBP3
FXYD3ENSG00000089356.1211.3544078.14800-2.783009.916408.68000HepG2FXR1
FXYD3ENSG00000089356.1219.0814076.96430-2.012006.426805.06120HepG2G3BP2
FXYD3ENSG00000089356.120.0000010.23300-99999.999993.151702.18940HepG2GEMIN5
FXYD3ENSG00000089356.1246.7132011.799601.985003.975502.75100HepG2GNB2L1
FXYD3ENSG00000089356.1211.0121036.60290-1.732902.984001.82790HepG2GRSF1
FXYD3ENSG00000089356.128.7344032.63930-1.901803.178501.67420HepG2HNRNPAB
FXYD3ENSG00000089356.1215.826303.717702.089702.032301.41080HepG2HNRNPF
FXYD3ENSG00000089356.1216.8431073.42230-2.124106.422805.38970HepG2HNRNPK
FXYD3ENSG00000089356.1228.875402.152803.745505.240904.40430HepG2HNRNPLL
FXYD3ENSG00000089356.1249.256402.205404.481106.946003.59250HepG2HNRNPUL1
FXYD3ENSG00000089356.1223.5235073.67180-1.647004.790003.92320HepG2IGF2BP2
FXYD3ENSG00000089356.122.4957069.15500-4.7923010.612708.79400HepG2IGF2BP3
FXYD3ENSG00000089356.1214.9915078.17540-2.382608.410907.28130HepG2MAGOH
FXYD3ENSG00000089356.128.6871078.60920-3.1777010.905109.71370HepG2MATR3
FXYD3ENSG00000089356.1223.322002.201003.405303.496602.39950HepG2MTPAP
FXYD3ENSG00000089356.1247.075608.710402.434105.559003.84890HepG2NAA15
FXYD3ENSG00000089356.1220.9045080.45790-1.944406.487205.53590HepG2NCBP2
FXYD3ENSG00000089356.128.7678031.90010-1.863302.893301.42830HepG2NKRF
FXYD3ENSG00000089356.1222.213701.910703.539203.806502.93200HepG2NSUN2
FXYD3ENSG00000089356.1277.7663036.137901.105502.322201.52270HepG2PABPC1
FXYD3ENSG00000089356.1236.790007.946402.210804.598803.67140HepG2PPIL4
FXYD3ENSG00000089356.123.3450068.06050-4.3467015.3689014.28010HepG2PTBP1
FXYD3ENSG00000089356.1267.8546027.847401.284803.388302.73760HepG2PUF60
FXYD3ENSG00000089356.123.2746029.56060-3.174305.315704.54760HepG2PUM1
FXYD3ENSG00000089356.122.6911015.53490-2.529202.443301.85470HepG2PUS1
FXYD3ENSG00000089356.121.5147014.56250-3.265102.413001.91990HepG2RBM22
FXYD3ENSG00000089356.121.3580075.73700-5.8014019.3817018.20250HepG2NELFE
FXYD3ENSG00000089356.1211.4861070.55280-2.618808.796107.79010HepG2RECQL
FXYD3ENSG00000089356.120.0000011.17990-99999.999993.594702.90330HepG2RPS19
FXYD3ENSG00000089356.120.0000012.85550-99999.999993.968603.01850HepG2RPS2
FXYD3ENSG00000089356.1211.4378039.69280-1.795103.403602.51630HepG2RPS3A
FXYD3ENSG00000089356.121.3398014.66690-3.452502.990502.28840HepG2SF3A3
FXYD3ENSG00000089356.1235.104402.129404.043107.062105.97840HepG2SF3B1
FXYD3ENSG00000089356.1211.3451070.84300-2.642608.792407.82960HepG2SF3B4
FXYD3ENSG00000089356.1297.7101016.450002.5703012.3320011.47520HepG2SRFBP1
FXYD3ENSG00000089356.121.4166073.95160-5.7061018.7059017.70510HepG2SRSF1
FXYD3ENSG00000089356.127.7931027.49440-1.818902.526201.92360HepG2SRSF5
FXYD3ENSG00000089356.1211.0198033.54500-1.606002.674401.41210HepG2SSRP1
FXYD3ENSG00000089356.1291.306508.550603.416507.571405.65860HepG2STAU1
FXYD3ENSG00000089356.1211.6722034.52330-1.564502.849501.73020HepG2STIP1
FXYD3ENSG00000089356.124.0640031.26940-2.943804.941204.15180HepG2SUCLG1
FXYD3ENSG00000089356.129.5285066.48950-2.802809.317008.38450HepG2TAF15
FXYD3ENSG00000089356.1235.9746013.007201.467602.560001.88450HepG2UPF1
FXYD3ENSG00000089356.121.1162012.55810-3.492002.351201.78930HepG2UTP3
FXYD3ENSG00000089356.12112.9044035.552101.667007.500205.69490HepG2XPO5
FXYD3ENSG00000089356.120.4632015.55060-5.069204.173902.87920HepG2XRCC6
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for FXYD3 is not available on ENCORE database.





2 RBPs can affect the splicing of FXYD3 :

Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
SEFXYD3ENSG00000089356.12chr19+356100713561015535607167356072633561026635610320-0.220000.001070.06357excludedHepG2SRSF9
RIFXYD3ENSG00000089356.12chr19+3561366835613858356136683561374335613821356138580.445000.003230.03086includedHepG2TAF15

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".





The Knockdown/knockout RNA-Seq assay for FXYD3 is not avaliable on ENCORE database.