CLEC11A

General Information

Gene Name       : CLEC11A
Gene ID             : ENSG00000105472.12
Essential Gene : No

Functions

Localization

Domains (AlphaFold: CLEC11A)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878CLEC11AENSG00000105472.120.000.000.00ENCSR000AEF
HepG2CLEC11AENSG00000105472.120.000.000.00ENCSR985KAT
K562CLEC11AENSG00000105472.126.002.314.16ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for CLEC11A is not avaliable on ENCORE database.



Proteins bound to RNA
  • CLEC11A RNA is bound by 4 proteins.  







eCLIP assay for CLEC11A is not avaliable on ENCORE database.





4 proteins are bound to CLEC11A RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr195122871651228845+3'-UTR,CDS4.740776.97460K562PCBP1
chr195122664651226719+5'-UTR4.052063.01428K562UCHL5
chr195122687051226931+CDS,intron-Proximal4.835444.06667K562GTF2F1
chr195122851951228588+CDS3.893454.36782K562DDX55
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for CLEC11A is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for CLEC11A is not available on ENCORE database.

  • 52 RBPs can affect the levels of CLEC11A.  








The Knockdown/knockout RNA-Seq assay for CLEC11A is not available on ENCORE database.





52 RBPs can affect the gene expression of CLEC11A :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
CLEC11AENSG00000105472.8174.8284088.315300.985104.675403.06200K562ABCF1
CLEC11AENSG00000105472.8147.0138069.290201.085103.482301.55140K562ADAR
CLEC11AENSG00000105472.8275.10340127.277001.111906.957206.11630K562AGGF1
CLEC11AENSG00000105472.8266.72590132.439001.009903.852703.07990K562AKAP8L
CLEC11AENSG00000105472.880.71320137.05730-0.763902.466801.90620K562AQR
CLEC11AENSG00000105472.8275.67150138.963000.988108.211806.50740K562ATP5C1
CLEC11AENSG00000105472.8152.7807056.960501.423307.761605.47270K562BCCIP
CLEC11AENSG00000105472.8195.7534055.047301.8302014.3452012.13510K562BCLAF1
CLEC11AENSG00000105472.8191.5704067.868601.497007.358805.42440K562CCAR1
CLEC11AENSG00000105472.8246.79320152.098500.698204.147302.66530K562CCDC124
CLEC11AENSG00000105472.8334.10590117.039201.5132016.6979014.10620K562CPEB4
CLEC11AENSG00000105472.8125.4620041.369301.600502.770201.98770K562CPSF6
CLEC11AENSG00000105472.8145.3788041.761601.7995010.147507.94710K562CSTF2
CLEC11AENSG00000105472.8223.65410112.220800.994806.939304.58880K562DDX6
CLEC11AENSG00000105472.881.3072035.958601.176903.210302.22120K562EFTUD2
CLEC11AENSG00000105472.8561.7743074.020202.9239068.7004066.24500K562EIF2S2
CLEC11AENSG00000105472.818.1544041.14800-1.180502.131301.42620K562EIF3G
CLEC11AENSG00000105472.859.41560115.63610-0.960703.134402.26310K562EIF4A3
CLEC11AENSG00000105472.8163.9731091.579900.840302.505601.30580K562EXOSC5
CLEC11AENSG00000105472.887.6166032.015501.452304.792302.53460K562FAM120A
CLEC11AENSG00000105472.853.66930120.25510-1.163905.086304.30080K562FXR1
CLEC11AENSG00000105472.82.2469029.73190-3.726005.787804.68030K562G3BP2
CLEC11AENSG00000105472.8112.5716036.051501.642606.586204.40370K562GEMIN5
CLEC11AENSG00000105472.872.4972039.496600.876101.988101.31160K562GPKOW
CLEC11AENSG00000105472.8155.9532098.628400.660902.117201.45020K562GRSF1
CLEC11AENSG00000105472.871.67810142.64560-0.992802.941301.83240K562HNRNPA1
CLEC11AENSG00000105472.8142.1870086.082100.723902.604401.83090K562HSPD1
CLEC11AENSG00000105472.883.7561044.873400.900202.279001.37260K562IGF2BP2
CLEC11AENSG00000105472.8124.7720038.553501.694308.110206.56440K562METAP2
CLEC11AENSG00000105472.881.1869035.445401.195503.276601.84140K562NONO
CLEC11AENSG00000105472.8202.7993089.308801.183104.327803.01610K562PABPN1
CLEC11AENSG00000105472.899.3459041.924401.244604.441203.19580K562PCBP2
CLEC11AENSG00000105472.8377.86070152.021401.313503.759602.09420K562PNPT1
CLEC11AENSG00000105472.8152.5131072.103401.080704.368803.30610K562PPIG
CLEC11AENSG00000105472.8172.9458053.971901.679909.623407.71520K562PSIP1
CLEC11AENSG00000105472.8409.67960168.183301.284405.620404.23470K562PUM2
CLEC11AENSG00000105472.8197.50910131.333000.588602.405601.89190K562PUS1
CLEC11AENSG00000105472.8191.99080127.972600.585102.557701.98440K562RBM15
CLEC11AENSG00000105472.888.8826043.887201.018003.318402.39210K562RBM22
CLEC11AENSG00000105472.895.4801049.300900.953502.817301.81730K562RCC2
CLEC11AENSG00000105472.894.7391034.947501.438705.057902.77280K562SRP68
CLEC11AENSG00000105472.8110.1189049.735901.146603.705802.46050K562SRSF4
CLEC11AENSG00000105472.891.0741042.406401.102703.673802.43100K562SRSF5
CLEC11AENSG00000105472.884.1474030.881301.446104.808402.63870K562TFIP11
CLEC11AENSG00000105472.8113.6486043.820001.374806.063504.78170K562TIA1
CLEC11AENSG00000105472.8134.8332074.228800.861003.349001.79650K562TRIP6
CLEC11AENSG00000105472.8270.56240190.040900.509602.589801.36590K562TROVE2
CLEC11AENSG00000105472.873.5882035.853301.037302.486401.52620K562UCHL5
CLEC11AENSG00000105472.8267.27810182.415100.551003.074902.31920K562UPF1
CLEC11AENSG00000105472.8172.84870112.044800.625302.419001.30490K562UTP3
CLEC11AENSG00000105472.854.52330162.33980-1.574106.031204.83220K562WDR43
CLEC11AENSG00000105472.8122.4808036.514701.745903.915602.37890K562XRN2
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for CLEC11A is not available on ENCORE database.






No RBPs affect the alternative splcing events of CLEC11A on ENCORE database.





The Knockdown/knockout RNA-Seq assay for CLEC11A is not avaliable on ENCORE database.