ISYNA1

General Information

Gene Name : ISYNA1
Gene ID : ENSG00000105655.18
Essential Gene : No

Functions

Not Available

Localization

Not Available

Domains (AlphaFold: ISYNA1)

Not Available

Antibody Validation

Not Avaiable

Expression Level in Cell lines

Cell Line	Gene Name	Ensembl ID	Rep1 TPM	Rep2 TPM	Average TPM	Experiment ID
Gm12878	ISYNA1	ENSG00000105655.18	1.59	2.57	2.08	ENCSR000AEF
HepG2	ISYNA1	ENSG00000105655.18	52.16	10.13	31.14	ENCSR985KAT
K562	ISYNA1	ENSG00000105655.18	143.14	49.21	96.17	ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.

eCLIP

No eCLIP experiment available

Antibody Validation

No Antibody Primary Validation image or Secondary image available

KD RNA-Seq

No KD RNA-Seq experiment available

RNA Bind-n-Seqn

No RBNS experiment available

Localization Image in HepG2

No Localization Information available

RBP	Antibody Info	Primary-HepG2	Secondary-HepG2	Primary-K562	Secondary-K562	Primary-UBERON	Primary-Hela

Summary
Proteins Bound to RBP RNA

RNA Targets

eCLIP assay for ISYNA1 is not avaliable on ENCORE database.

Proteins bound to RNA

ISYNA1 RNA is bound by 55 proteins.

CanvasJS.com

eCLIP assay for ISYNA1 is not avaliable on ENCORE database.

55 proteins are bound to ISYNA1 RNA:

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Search:

Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name
chr19	18548224	18548302	-	intron-Distal	4.95046	400.00000	K562	DROSHA
chr19	18548230	18548303	-	intron-Distal	6.51177	76.04867	K562	GTF2F1
chr19	18548237	18548324	-	intron-Distal,intron-Proximal	4.80951	71.34604	K562	GEMIN5
chr19	18548026	18548106	-	5'-UTR,intron-Distal	4.18260	62.16743	K562	DROSHA
chr19	18547632	18547752	-	5'-UTR,CDS,intron-Distal,intron-Proximal	4.56461	60.04691	K562	DDX24
chr19	18548232	18548312	-	intron-Distal,intron-Proximal	4.51883	59.39432	K562	FASTKD2
chr19	18548103	18548197	-	5'-UTR,intron-Distal,intron-Proximal	5.38063	59.17515	K562	GTF2F1
chr19	18548030	18548138	-	5'-UTR,intron-Distal,intron-Proximal	5.40383	51.70761	K562	DDX24
chr19	18547656	18547760	-	5'-UTR,CDS,intron-Distal,intron-Proximal	4.14339	48.92878	K562	GTF2F1
chr19	18548226	18548286	-	intron-Distal	6.11492	48.22878	K562	RBFOX2
Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name

Showing 1 to 10 of 211 entries

eCLIP assay for ISYNA1 is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout assay for ISYNA1 is not available on ENCORE database.
132 RBPs can affect the levels of ISYNA1.

CanvasJS.com

The Knockdown/knockout RNA-Seq assay for ISYNA1 is not available on ENCORE database.

132 RBPs can affect the gene expression of ISYNA1 :

Show entries

Search:

Gene Name	Gene ID	KDMean	CNMean	log2(fold change) *	-log(pval) **	-log(padj) **	Cell Line	Affected by RBP	Bound by RBP
ISYNA1	ENSG00000105655.14	1313.88220	258.32470	2.34650	86.31850	84.25660	HepG2	TIAL1
ISYNA1	ENSG00000105655.14	5688.76580	2601.83100	1.12850	57.36370	54.84330	K562	AGGF1
ISYNA1	ENSG00000105655.14	391.71520	872.47850	-1.15530	30.21000	28.89950	HepG2	ZNF622
ISYNA1	ENSG00000105655.14	668.77450	260.63600	1.35940	29.35510	27.76140	HepG2	TRIM56
ISYNA1	ENSG00000105655.14	2299.72610	1115.45370	1.04370	25.95000	24.00880	K562	PTBP1
ISYNA1	ENSG00000105655.14	2092.04640	4339.62690	-1.05270	23.52420	21.99980	K562	AQR
ISYNA1	ENSG00000105655.14	5368.44770	2616.04910	1.03700	23.68900	21.88170	K562	RBM15
ISYNA1	ENSG00000105655.14	1043.56880	541.91510	0.94530	22.29340	20.80200	HepG2	SUCLG1
ISYNA1	ENSG00000105655.14	956.17320	476.49880	1.00470	21.65430	20.13010	HepG2	SRSF5
ISYNA1	ENSG00000105655.14	359.05430	765.89970	-1.09300	20.44960	19.04640	HepG2	UTP3
Gene Name	Gene ID	KDMean	CNMean	log2(fold change)	-log(pval)	-log(padj)	Cell Line	Affected by RBP	Bound by RBP

Showing 1 to 10 of 150 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

The Knockdown/knockout RNA-Seq assay for ISYNA1 is not available on ENCORE database.

41 RBPs can affect the splicing of ISYNA1 :

Show entries

Search:

Event Type	Gene Name	Gene ID	chr	Strand	ExonStart	ExonEnd	2ndExonStart	2ndExonEnd	upstreamES	upstreamEE	downstreamES	downstreamEE	dPSI	p-value	FDR	is_included	Cell Line	Affected by RBP
SE	ISYNA1	ENSG00000105655.14	chr19	-	18547493	18547687			18547139	18547289	18548669	18548921	-0.49000	0.00000	0.00000	excluded	K562	SRSF1
SE	ISYNA1	ENSG00000105655.14	chr19	-	18547493	18547687			18547139	18547289	18548669	18548921	-0.18300	0.00000	0.00050	excluded	K562	FXR1
A3SS	ISYNA1	ENSG00000105655.14	chr19	-	18547139	18547915			18547139	18547289	18548408	18548570	-0.28200	0.00000	0.00033	shorter	K562	SRSF1
RI	ISYNA1	ENSG00000105655.14	chr19	-	18548408	18548798			18548408	18548570	18548669	18548798	-0.18900	0.00000	0.00030	excluded	K562	APOBEC3C
MXE	ISYNA1	ENSG00000105655.14	chr19	-	18547493	18547687	18548408	18548570	18547139	18547289	18548669	18548798	0.50100	0.00000	0.00000	1included	HepG2	MATR3
MXE	ISYNA1	ENSG00000105655.14	chr19	-	18547493	18547687	18548408	18548570	18547139	18547289	18548669	18548798	0.21800	0.00000	0.00175	1included	K562	APOBEC3C
MXE	ISYNA1	ENSG00000105655.14	chr19	-	18547493	18547687	18548408	18548570	18547139	18547289	18548669	18548798	0.48700	0.00000	0.00000	1included	HepG2	NCBP2
RI	ISYNA1	ENSG00000105655.14	chr19	-	18548408	18548798			18548408	18548570	18548669	18548798	-0.13900	0.00001	0.00316	excluded	K562	ZC3H8
RI	ISYNA1	ENSG00000105655.14	chr19	-	18548669	18548972			18548669	18548798	18548902	18548972	0.08400	0.00001	0.00267	included	K562	LARP4
MXE	ISYNA1	ENSG00000105655.14	chr19	-	18547493	18547687	18548408	18548570	18547139	18547289	18548669	18548798	0.26600	0.00002	0.00073	1included	K562	SRSF1

Showing 1 to 10 of 58 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

ISYNA1

General Information

Functions

Localization

Domains (AlphaFold: ISYNA1)

Antibody Validation

Expression Level in Cell lines

Assays

RNA Targets

Proteins bound to RNA

eCLIP assay for ISYNA1 is not avaliable on ENCORE database.

55 proteins are bound to ISYNA1 RNA:

eCLIP assay for ISYNA1 is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout RNA-Seq assay for ISYNA1 is not available on ENCORE database.

132 RBPs can affect the gene expression of ISYNA1 :

The Knockdown/knockout RNA-Seq assay for ISYNA1 is not available on ENCORE database.

41 RBPs can affect the splicing of ISYNA1 :

The Knockdown/knockout RNA-Seq assay for ISYNA1 is not avaliable on ENCORE database.