GRB10

General Information

Gene Name : GRB10
Gene ID : ENSG00000106070.18
Essential Gene : No

Functions

Not Available

Localization

Not Available

Domains (AlphaFold: GRB10)

Not Available

Antibody Validation

Not Avaiable

Expression Level in Cell lines

Cell Line	Gene Name	Ensembl ID	Rep1 TPM	Rep2 TPM	Average TPM	Experiment ID
Gm12878	GRB10	ENSG00000106070.18	0.10	0.01	0.06	ENCSR000AEF
HepG2	GRB10	ENSG00000106070.18	4.34	4.90	4.62	ENCSR985KAT
K562	GRB10	ENSG00000106070.18	34.77	32.94	33.86	ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.

eCLIP

No eCLIP experiment available

Antibody Validation

No Antibody Primary Validation image or Secondary image available

KD RNA-Seq

No KD RNA-Seq experiment available

RNA Bind-n-Seqn

No RBNS experiment available

Localization Image in HepG2

No Localization Information available

RBP	Antibody Info	Primary-HepG2	Secondary-HepG2	Primary-K562	Secondary-K562	Primary-UBERON	Primary-Hela

Summary
Proteins Bound to RBP RNA

RNA Targets

eCLIP assay for GRB10 is not avaliable on ENCORE database.

Proteins bound to RNA

GRB10 RNA is bound by 45 proteins.

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eCLIP assay for GRB10 is not avaliable on ENCORE database.

45 proteins are bound to GRB10 RNA:

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Search:

Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name
chr7	50657834	50657919	-	3'-UTR,intron-Distal	6.72144	44.12882	K562	PUM2
chr7	50851055	50851177	-	intron-Distal	6.71360	41.20453	K562	EIF4G2
chr7	50660733	50660851	-	CDS,intron-Distal	5.56760	36.31026	K562	SF3B4
chr7	50840966	50841091	-	intron-Distal	4.96090	30.00157	K562	ILF3
chr7	50660571	50660674	-	3'-UTR,CDS,intron-Distal,intron-Proximal	4.80959	26.49617	K562	RBM15
chr7	50680543	50680629	-	intron-Distal,intron-Proximal	5.76472	25.18023	K562	SF3B4
chr7	50851028	50851134	-	intron-Distal	5.32701	20.11186	K562	CSTF2T
chr7	50674098	50674200	-	CDS,intron-Distal,intron-Proximal	4.27169	19.31754	K562	SF3B4
chr7	50850569	50850678	-	intron-Distal,intron-Proximal	3.31240	18.53355	K562	CSTF2T
chr7	50850606	50850678	-	intron-Distal,intron-Proximal	5.05192	17.71727	K562	EIF4G2
Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name

Showing 1 to 10 of 230 entries

eCLIP assay for GRB10 is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout assay for GRB10 is not available on ENCORE database.
172 RBPs can affect the levels of GRB10.

CanvasJS.com

The Knockdown/knockout RNA-Seq assay for GRB10 is not available on ENCORE database.

172 RBPs can affect the gene expression of GRB10 :

Show entries

Search:

Gene Name	Gene ID	KDMean	CNMean	log2(fold change) *	-log(pval) **	-log(padj) **	Cell Line	Affected by RBP	Bound by RBP
GRB10	ENSG00000106070.13	3629.85870	660.20750	2.45880	224.49030	221.86840	HepG2	SRFBP1
GRB10	ENSG00000106070.13	2389.29120	699.36390	1.77240	95.56970	93.00880	HepG2	ETF1
GRB10	ENSG00000106070.13	2339.12610	282.51830	3.04950	94.82820	92.06450	HepG2	DDX6
GRB10	ENSG00000106070.13	1131.65010	263.61010	2.10190	88.07840	85.88190	HepG2	SRSF9
GRB10	ENSG00000106070.13	2318.61220	801.37200	1.53260	70.31400	68.00860	HepG2	CELF1
GRB10	ENSG00000106070.13	2820.11190	564.28370	2.32120	64.04610	61.20220	HepG2	DDX55
GRB10	ENSG00000106070.13	1048.19040	310.42410	1.75550	54.20430	52.25060	HepG2	SF3B4
GRB10	ENSG00000106070.13	2965.17770	584.53620	2.34270	51.72940	50.03970	HepG2	RBM22
GRB10	ENSG00000106070.13	2629.81340	641.95170	2.03430	52.39570	49.90640	HepG2	FIP1L1
GRB10	ENSG00000106070.13	1212.92970	302.81820	2.00190	44.15880	41.81250	HepG2	FXR1
Gene Name	Gene ID	KDMean	CNMean	log2(fold change)	-log(pval)	-log(padj)	Cell Line	Affected by RBP	Bound by RBP

Showing 1 to 10 of 214 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

The Knockdown/knockout RNA-Seq assay for GRB10 is not available on ENCORE database.

17 RBPs can affect the splicing of GRB10 :

Show entries

Search:

Event Type	Gene Name	Gene ID	chr	Strand	ExonStart	ExonEnd	2ndExonStart	2ndExonEnd	upstreamES	upstreamEE	downstreamES	downstreamEE	dPSI	p-value	FDR	is_included	Cell Line	Affected by RBP
SE	GRB10	ENSG00000106070.13	chr7	-	50671694	50671782			50663133	50663227	50672007	50672074	-0.14900	0.00000	0.00000	excluded	K562	SRSF1
SE	GRB10	ENSG00000106070.13	chr7	-	50664021	50664234			50663133	50663227	50671694	50671782	0.07700	0.00000	0.00000	included	K562	MATR3
A3SS	GRB10	ENSG00000106070.13	chr7	-	50694518	50694735			50694518	50694675	50737418	50737560	0.06500	0.00000	0.00001	longer	K562	AQR
A3SS	GRB10	ENSG00000106070.13	chr7	-	50672986	50673170			50672986	50673103	50674033	50674111	0.08800	0.00000	0.00000	longer	K562	AQR
SE	GRB10	ENSG00000106070.13	chr7	-	50772836	50773020			50771517	50771605	50823583	50823761	-0.80200	0.00004	0.00455	excluded	HepG2	RBM22
SE	GRB10	ENSG00000106070.13	chr7	-	50737418	50737560			50694518	50694675	50742132	50742355	-0.18300	0.00004	0.00148	excluded	K562	U2AF1
MXE	GRB10	ENSG00000106070.13	chr7	-	50672986	50673103	50674033	50674111	50672007	50672074	50680437	50680536	-0.18200	0.00004	0.00256	2included	K562	HNRNPUL1
MXE	GRB10	ENSG00000106070.13	chr7	-	50672986	50673103	50674033	50674111	50672007	50672074	50680437	50680536	-0.16900	0.00010	0.00344	2included	K562	DROSHA
MXE	GRB10	ENSG00000106070.13	chr7	-	50771517	50771605	50778571	50778687	50742132	50742355	50823583	50823753	0.07100	0.00026	0.05559	1included	K562	HNRNPA1
SE	GRB10	ENSG00000106070.13	chr7	-	50771517	50771605			50742132	50742355	50799968	50800065	-0.05500	0.00048	0.00924	excluded	K562	PUS1

Showing 1 to 10 of 25 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

GRB10

General Information

Functions

Localization

Domains (AlphaFold: GRB10)

Antibody Validation

Expression Level in Cell lines

Assays

RNA Targets

Proteins bound to RNA

eCLIP assay for GRB10 is not avaliable on ENCORE database.

45 proteins are bound to GRB10 RNA:

eCLIP assay for GRB10 is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout RNA-Seq assay for GRB10 is not available on ENCORE database.

172 RBPs can affect the gene expression of GRB10 :

The Knockdown/knockout RNA-Seq assay for GRB10 is not available on ENCORE database.

17 RBPs can affect the splicing of GRB10 :

The Knockdown/knockout RNA-Seq assay for GRB10 is not avaliable on ENCORE database.