SLCO2B1

General Information

Gene Name : SLCO2B1
Gene ID : ENSG00000137491.14
Essential Gene : No

Functions

Not Available

Localization

Not Available

Domains (AlphaFold: SLCO2B1)

Not Available

Antibody Validation

Not Avaiable

Expression Level in Cell lines

Cell Line	Gene Name	Ensembl ID	Rep1 TPM	Rep2 TPM	Average TPM	Experiment ID
Gm12878	SLCO2B1	ENSG00000137491.14	0.41	0.55	0.48	ENCSR000AEF
HepG2	SLCO2B1	ENSG00000137491.14	19.61	15.25	17.43	ENCSR985KAT
K562	SLCO2B1	ENSG00000137491.14	8.14	8.28	8.21	ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.

eCLIP

No eCLIP experiment available

Antibody Validation

No Antibody Primary Validation image or Secondary image available

KD RNA-Seq

No KD RNA-Seq experiment available

RNA Bind-n-Seqn

No RBNS experiment available

Localization Image in HepG2

No Localization Information available

RBP	Antibody Info	Primary-HepG2	Secondary-HepG2	Primary-K562	Secondary-K562	Primary-UBERON	Primary-Hela

Summary
Proteins Bound to RBP RNA

RNA Targets

eCLIP assay for SLCO2B1 is not avaliable on ENCORE database.

Proteins bound to RNA

SLCO2B1 RNA is bound by 10 proteins.

CanvasJS.com

eCLIP assay for SLCO2B1 is not avaliable on ENCORE database.

10 proteins are bound to SLCO2B1 RNA:

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Search:

Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name
chr11	74916134	74916244	+	3'-UTR	7.07855	35.01060	HepG2	UPF1
chr11	74916019	74916098	+	3'-UTR	6.86700	33.93822	HepG2	AKAP1
chr11	74916319	74916433	+	3'-UTR	6.11171	33.13169	HepG2	UPF1
chr11	74915931	74916015	+	3'-UTR	6.79769	32.59554	HepG2	UPF1
chr11	74915824	74915912	+	3'-UTR	6.09251	32.53776	HepG2	UPF1
chr11	74916136	74916250	+	3'-UTR	6.79288	31.60164	HepG2	AKAP1
chr11	74916647	74916718	+	3'-UTR	5.51003	24.07196	HepG2	AKAP1
chr11	74916021	74916099	+	3'-UTR	5.51265	23.63796	HepG2	UPF1
chr11	74915840	74915913	+	3'-UTR	4.51828	22.17108	HepG2	AKAP1
chr11	74915926	74916012	+	3'-UTR	5.48200	21.95740	HepG2	AKAP1
Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name

Showing 1 to 10 of 37 entries

eCLIP assay for SLCO2B1 is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout assay for SLCO2B1 is not available on ENCORE database.
181 RBPs can affect the levels of SLCO2B1.

CanvasJS.com

The Knockdown/knockout RNA-Seq assay for SLCO2B1 is not available on ENCORE database.

181 RBPs can affect the gene expression of SLCO2B1 :

Show entries

Search:

Gene Name	Gene ID	KDMean	CNMean	log2(fold change) *	-log(pval) **	-log(padj) **	Cell Line	Affected by RBP	Bound by RBP
SLCO2B1	ENSG00000137491.10	102.73570	2508.06860	-4.60960	174.04470	171.01740	HepG2	AKAP1
SLCO2B1	ENSG00000137491.10	3394.06980	945.71880	1.84340	134.04100	131.94560	HepG2	SSB
SLCO2B1	ENSG00000137491.10	2824.13940	796.89790	1.82520	125.79580	122.98440	HepG2	PUS1
SLCO2B1	ENSG00000137491.10	1209.07720	223.45280	2.43580	96.79740	93.46960	K562	SF3A3
SLCO2B1	ENSG00000137491.10	1942.74750	363.15810	2.41930	76.40280	73.86570	HepG2	HNRNPLL
SLCO2B1	ENSG00000137491.10	1743.88530	570.38230	1.61220	69.45640	66.70180	HepG2	PRPF4
SLCO2B1	ENSG00000137491.10	2161.96070	817.74640	1.40250	68.99290	66.56170	HepG2	UPF1
SLCO2B1	ENSG00000137491.10	2484.11560	703.43360	1.82010	63.50810	61.27730	HepG2	HNRNPA1
SLCO2B1	ENSG00000137491.10	2208.22260	634.62300	1.79880	59.50890	56.68100	HepG2	MSI2
SLCO2B1	ENSG00000137491.10	920.65990	162.27130	2.50420	59.30010	55.75020	K562	FMR1
Gene Name	Gene ID	KDMean	CNMean	log2(fold change)	-log(pval)	-log(padj)	Cell Line	Affected by RBP	Bound by RBP

Showing 1 to 10 of 247 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

The Knockdown/knockout RNA-Seq assay for SLCO2B1 is not available on ENCORE database.

1 RBPs can affect the splicing of SLCO2B1 :

Show entries

Search:

Event Type	Gene Name	Gene ID	chr	Strand	ExonStart	ExonEnd	2ndExonStart	2ndExonEnd	upstreamES	upstreamEE	downstreamES	downstreamEE	dPSI	p-value	FDR	is_included	Cell Line	Affected by RBP	Bound by RBP
SE	SLCO2B1	ENSG00000137491.10	chr11	+	74875007	74875145			74873699	74873830	74876831	74876994	-0.20000	0.00045	0.03313	excluded	HepG2	AKAP1

Showing 1 to 1 of 1 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

SLCO2B1

General Information

Functions

Localization

Domains (AlphaFold: SLCO2B1)

Antibody Validation

Expression Level in Cell lines

Assays

RNA Targets

Proteins bound to RNA

eCLIP assay for SLCO2B1 is not avaliable on ENCORE database.

10 proteins are bound to SLCO2B1 RNA:

eCLIP assay for SLCO2B1 is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout RNA-Seq assay for SLCO2B1 is not available on ENCORE database.

181 RBPs can affect the gene expression of SLCO2B1 :

The Knockdown/knockout RNA-Seq assay for SLCO2B1 is not available on ENCORE database.

1 RBPs can affect the splicing of SLCO2B1 :

The Knockdown/knockout RNA-Seq assay for SLCO2B1 is not avaliable on ENCORE database.