EPB41L2

General Information

Gene Name : EPB41L2
Gene ID : ENSG00000079819.18
Essential Gene : No

Functions

Not Available

Localization

Not Available

Domains (AlphaFold: EPB41L2)

Not Available

Antibody Validation

View validation images for all EPB41L2 antibodies

Expression Level in Cell lines

Cell Line	Gene Name	Ensembl ID	Rep1 TPM	Rep2 TPM	Average TPM	Experiment ID
Gm12878	EPB41L2	ENSG00000079819.18	23.83	22.89	23.36	ENCSR000AEF
HepG2	EPB41L2	ENSG00000079819.18	63.52	84.02	73.77	ENCSR985KAT
K562	EPB41L2	ENSG00000079819.18	39.34	36.08	37.71	ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.

eCLIP

No eCLIP experiment available

Antibody Validation

GeneName	Antibody_DCC_ID	Product_ID	Lot_ID	Phosphate	HepG2 Primary Validation	K562 Primary Validation	HepG2 Secondary Validation	K562 Secondary Validation
EPB41L2		A301-424A	1					BGKcLV40-23, Submitted, ENCORE2
EPB41L2		A301-425A	1					BGKcLV40-23, Submitted, ENCORE2

KD RNA-Seq

GeneName	Cell_Line	Method	Exp_ID	Control_ID	Sample_reps	Control_reps	KD%	Status	Project	Note
EPB41L2	K562	CRISPR			EPB41L2-BGKcLV40-23,EPB41L2-BGKcLV40-24	NT-BGKcLV40-1,NT-BGKcLV40-2	56.6,62.6	Submitting	ENCORE2
EPB41L2	HepG2	CRISPR			BGHcLV41-43,BGHcLV41-44	BGHcLV41-1,BGHcLV41-2	NEED DISCUSSION ,	Submitting	ENCORE2

RNA Bind-n-Seqn

No RBNS experiment available

Localization Image in HepG2

No Localization Information available

RBP	Antibody Info	Primary-HepG2	Secondary-HepG2	Primary-K562	Secondary-K562	Primary-UBERON	Primary-Hela
EPB41L2	Product_ID: A301-424A Lot_ID: 1 Source: Bethyl Labs Target Name: EPB41L2-human
EPB41L2	Product_ID: A301-425A Lot_ID: 1 Source: Bethyl Labs Target Name: EPB41L2-human

Summary
Proteins Bound to RBP RNA

RNA Targets

eCLIP assay for EPB41L2 is not avaliable on ENCORE database.

Proteins bound to RNA

EPB41L2 RNA is bound by 39 proteins.

CanvasJS.com

eCLIP assay for EPB41L2 is not avaliable on ENCORE database.

39 proteins are bound to EPB41L2 RNA:

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Search:

Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name
chr6	131201212	131201257	-	intron-Distal,intron-Proximal	8.72801	400.00000	HepG2	RBFOX2
chr6	131201204	131201253	-	intron-Distal,intron-Proximal	6.11002	400.00000	HepG2	DDX6
chr6	131201144	131201152	-	intron-Distal	8.20256	400.00000	HepG2	RBFOX2
chr6	131201194	131201212	-	intron-Distal,intron-Proximal	8.53499	400.00000	HepG2	RBFOX2
chr6	131201100	131201156	-	intron-Distal	6.80539	400.00000	HepG2	DDX6
chr6	131201160	131201173	-	intron-Distal	8.31781	400.00000	HepG2	RBFOX2
chr6	131201152	131201155	-	intron-Distal	8.22994	400.00000	HepG2	RBFOX2
chr6	131201155	131201160	-	intron-Distal	8.24489	400.00000	HepG2	RBFOX2
chr6	131201108	131201139	-	intron-Distal	7.57104	400.00000	HepG2	RBFOX2
chr6	131201139	131201144	-	intron-Distal	8.22818	400.00000	HepG2	RBFOX2
Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name

Showing 1 to 10 of 261 entries

eCLIP assay for EPB41L2 is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout assay for EPB41L2 is not available on ENCORE database.
164 RBPs can affect the levels of EPB41L2.

CanvasJS.com

The Knockdown/knockout RNA-Seq assay for EPB41L2 is not available on ENCORE database.

164 RBPs can affect the gene expression of EPB41L2 :

Show entries

Search:

Gene Name	Gene ID	KDMean	CNMean	log2(fold change) *	-log(pval) **	-log(padj) **	Cell Line	Affected by RBP	Bound by RBP
EPB41L2	ENSG00000079819.12	754.61270	7592.23380	-3.33070	99999.99999	99999.99999	HepG2	SSB
EPB41L2	ENSG00000079819.12	1337.49720	5280.77870	-1.98120	168.01190	165.26410	HepG2	DKC1
EPB41L2	ENSG00000079819.12	1088.20410	5084.97690	-2.22430	139.03800	136.50530	HepG2	TIAL1
EPB41L2	ENSG00000079819.12	2437.46920	5886.63290	-1.27210	104.37910	101.61590	HepG2	ZC3H8
EPB41L2	ENSG00000079819.12	2637.04200	7742.16410	-1.55380	101.76380	99.52800	HepG2	RBM22
EPB41L2	ENSG00000079819.12	2341.03260	5518.63270	-1.23720	99.54850	97.00320	HepG2	CKAP4
EPB41L2	ENSG00000079819.12	1714.29090	6459.62950	-1.91380	91.82680	88.98220	HepG2	PUF60
EPB41L2	ENSG00000079819.12	2233.18150	5104.91750	-1.19280	82.49470	79.71620	HepG2	DDX19B
EPB41L2	ENSG00000079819.12	1293.66670	4736.09380	-1.87220	80.03020	77.60720	HepG2	HNRNPA1
EPB41L2	ENSG00000079819.12	1426.74790	5231.98090	-1.87460	79.27760	76.90810	HepG2	RPLP0
Gene Name	Gene ID	KDMean	CNMean	log2(fold change)	-log(pval)	-log(padj)	Cell Line	Affected by RBP	Bound by RBP

Showing 1 to 10 of 211 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

The Knockdown/knockout RNA-Seq assay for EPB41L2 is not available on ENCORE database.

55 RBPs can affect the splicing of EPB41L2 :

Show entries

Search:

Event Type	Gene Name	Gene ID	chr	Strand	ExonStart	ExonEnd	upstreamES	upstreamEE	downstreamES	downstreamEE	dPSI	FDR	is_included	Cell Line	Affected by RBP
SE	EPB41L2	ENSG00000079819.12	chr6	-	131199243	131199390	131190702	131191266	131206235	131206408	0.25900	0.00002	included	HepG2	G3BP1
SE	EPB41L2	ENSG00000079819.12	chr6	-	131197813	131197915	131190798	131191266	131199243	131199390	0.57100	0.00000	included	HepG2	U2AF1
SE	EPB41L2	ENSG00000079819.12	chr6	-	131199243	131199390	131190702	131191266	131206235	131206408	0.22500	0.00081	included	K562	UTP3
SE	EPB41L2	ENSG00000079819.12	chr6	-	131199243	131199390	131190702	131191266	131206235	131206408	-0.11700	0.00046	excluded	HepG2	HNRNPM
SE	EPB41L2	ENSG00000079819.12	chr6	-	131199243	131199390	131190702	131191266	131206235	131206408	0.18300	0.00010	included	K562	PUM1
SE	EPB41L2	ENSG00000079819.12	chr6	-	131199243	131199390	131190702	131191266	131206235	131206408	0.21500	0.00002	included	HepG2	TBRG4
SE	EPB41L2	ENSG00000079819.12	chr6	-	131199243	131199390	131190702	131191266	131206235	131206408	-0.12300	0.00000	excluded	HepG2	QKI
SE	EPB41L2	ENSG00000079819.12	chr6	-	131199243	131199390	131190702	131191266	131206235	131206408	0.09600	0.00107	included	K562	DROSHA
SE	EPB41L2	ENSG00000079819.12	chr6	-	131199243	131199390	131190702	131191266	131206235	131206408	0.27100	0.00005	included	HepG2	PTBP1
SE	EPB41L2	ENSG00000079819.12	chr6	-	131199243	131199390	131190702	131191266	131206235	131206408	0.31000	0.00076	included	HepG2	TIAL1

Showing 1 to 10 of 109 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

EPB41L2

General Information

Functions

Localization

Domains (AlphaFold: EPB41L2)

Antibody Validation

Expression Level in Cell lines

Assays

RNA Targets

Proteins bound to RNA

eCLIP assay for EPB41L2 is not avaliable on ENCORE database.

39 proteins are bound to EPB41L2 RNA:

eCLIP assay for EPB41L2 is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout RNA-Seq assay for EPB41L2 is not available on ENCORE database.

164 RBPs can affect the gene expression of EPB41L2 :

The Knockdown/knockout RNA-Seq assay for EPB41L2 is not available on ENCORE database.

55 RBPs can affect the splicing of EPB41L2 :

The Knockdown/knockout RNA-Seq assay for EPB41L2 is not avaliable on ENCORE database.