ZYG11A

General Information

Gene Name       : ZYG11A
Gene ID             : ENSG00000203995.9
Essential Gene : No

Functions

Localization

Domains (AlphaFold: ZYG11A)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878ZYG11AENSG00000203995.90.320.460.39ENCSR000AEF
HepG2ZYG11AENSG00000203995.90.000.020.01ENCSR985KAT
K562ZYG11AENSG00000203995.98.799.098.94ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for ZYG11A is not avaliable on ENCORE database.



Proteins bound to RNA
  • ZYG11A RNA is bound by 19 proteins.  







eCLIP assay for ZYG11A is not avaliable on ENCORE database.





19 proteins are bound to ZYG11A RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr15330861953308691+5'-UTR,CDS,intron-Proximal3.223463.78727K562PRPF8
chr15330852953308602+5'-UTR,CDS4.247313.48187K562RBM15
chr15333333553333435+CDS,intron-Proximal4.158318.36737K562EFTUD2
chr15332328553323359+CDS,intron-Distal4.4801414.81038K562RBM15
chr15335849353358564+CDS3.458704.33455K562LIN28B
chr15333320453333258+CDS,intron-Proximal3.736875.55543K562GPKOW
chr15332323753323275+CDS,intron-Distal4.717505.40333K562RBM15
chr15333329553333343+CDS,intron-Proximal4.356824.98857K562TIA1
chr15334358053343626+CDS,intron-Proximal3.712104.35635K562PRPF8
chr15333217953332316+CDS,intron-Proximal3.5603410.38564K562BUD13
chr15332307353323113+CDS,intron-Distal4.470124.46921K562RBM15
chr15334362653343696+CDS,intron-Proximal4.922486.80771K562PRPF8
chr15333338353333448+CDS,intron-Proximal3.989483.58873K562U2AF1
chr15333326753333374+CDS,intron-Proximal3.317987.52282K562PRPF8
chr15332652453326586+CDS,intron-Proximal3.640386.00776K562PRPF8
chr15333337453333473+CDS,intron-Proximal3.066488.07535K562PRPF8
chr15332299253323039+CDS,intron-Distal4.665565.14756K562RBM15
chr15334349853343552+CDS,intron-Proximal3.324933.54718K562PRPF8
chr15332335953323400+CDS,intron-Distal4.211666.50633K562RBM15
chr15333318453333274+CDS,intron-Proximal4.515766.99120K562AQR
chr15333222453332294+CDS,intron-Proximal3.731387.17950K562AQR
chr15333718053337232+intron-Distal3.733566.09502K562QKI
chr15334743553347533+intron-Distal,intron-Proximal6.4787214.44342K562QKI
chr15335276153352861+intron-Distal,intron-Proximal3.452744.13575K562KHSRP
chr15332226453322314+intron-Distal3.921353.02234K562KHSRP
chr15334201053342061+intron-Distal3.338503.43875K562EXOSC5
chr15334650153346568+intron-Distal4.681374.48002K562AQR
chr15333733253337404+intron-Distal3.138225.25627K562QKI
chr15335433853354411+intron-Distal4.709294.58544K562ILF3
chr15335365553353839+intron-Distal3.943593.87596K562KHDRBS1
chr15334759253347663+intron-Distal4.122544.77922K562HNRNPC
chr15333663853336697+intron-Distal4.189813.71802K562RBFOX2
chr15335135253351387+intron-Distal5.7831016.71683K562KHSRP
chr15334365253343745+intron-Distal,intron-Proximal3.596404.88100K562AQR
chr15334281153342926+intron-Distal3.234267.62289K562DROSHA
chr15335133353351352+intron-Distal3.843817.55138K562KHSRP
chr15334276653342813+intron-Distal5.3900811.36415K562RBFOX2
chr15335138753351444+intron-Distal,intron-Proximal5.0848220.41590K562KHSRP
chr15334758353347592+intron-Distal3.636103.25106K562HNRNPC
chr15332659453326681+intron-Distal,intron-Proximal4.598685.50285K562PRPF8
chr15334281353342839+intron-Distal5.4731523.81985K562RBFOX2
chr15334283953342924+intron-Distal4.3937621.12623K562RBFOX2
chr15334800353348087+intron-Distal4.235783.90241K562MATR3
chr15334708853347111+intron-Proximal3.423558.04398K562AQR
chr15334711153347141+intron-Proximal4.5608611.69745K562AQR
chr15333335053333391+intron-Proximal4.2325610.90247K562SF3B4
chr15335144453351470+intron-Proximal3.530104.10408K562KHSRP
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for ZYG11A is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for ZYG11A is not available on ENCORE database.

  • 30 RBPs can affect the levels of ZYG11A.  








The Knockdown/knockout RNA-Seq assay for ZYG11A is not available on ENCORE database.





30 RBPs can affect the gene expression of ZYG11A :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
ZYG11AENSG00000203995.5703.10670553.923300.344002.340301.81070K562AGGF1
ZYG11AENSG00000203995.5757.97650576.377700.395002.765802.11250K562AKAP8L
ZYG11AENSG00000203995.5609.49750944.66300-0.632206.233405.41250K562AQR
ZYG11AENSG00000203995.5758.09060604.750200.325902.517701.64850K562ATP5C1
ZYG11AENSG00000203995.5251.29450387.88210-0.626204.404503.41740K562CPSF6
ZYG11AENSG00000203995.5647.19020808.95670-0.321902.778802.12610K562DDX47
ZYG11AENSG00000203995.5381.36320529.75790-0.474202.809401.88920K562EFTUD2
ZYG11AENSG00000203995.5504.30660717.02540-0.507705.309404.35960K562EIF2S2
ZYG11AENSG00000203995.5435.25180564.28100-0.374602.249201.48440K562FIP1L1
ZYG11AENSG00000203995.5233.22750334.55450-0.520502.585201.70460K562FTO
ZYG11AENSG00000203995.5797.99750611.064400.385001.934001.35450K562G3BP2
ZYG11AENSG00000203995.5546.03760955.51970-0.8073010.197108.72190K562GRSF1
ZYG11AENSG00000203995.5512.66750655.85190-0.355302.489201.47010K562HNRNPA1
ZYG11AENSG00000203995.5332.21290507.04060-0.610004.600003.84860K562HNRNPC
ZYG11AENSG00000203995.5331.15420452.79130-0.451302.615501.50750K562HNRNPF
ZYG11AENSG00000203995.5554.40210765.07890-0.464703.581002.67990K562HSPD1
ZYG11AENSG00000203995.5779.77420611.697000.350102.216301.48680K562KIF1C
ZYG11AENSG00000203995.5484.85460606.77010-0.323602.538101.76210K562MTPAP
ZYG11AENSG00000203995.5726.52890480.311200.597003.663302.61480K562NAA15
ZYG11AENSG00000203995.5396.91840533.20780-0.425902.275601.52140K562PCBP3
ZYG11AENSG00000203995.5486.38000640.53590-0.397202.537901.75720K562PPIG
ZYG11AENSG00000203995.5366.74880515.51340-0.491202.766402.01790K562PRPF8
ZYG11AENSG00000203995.5894.68750711.370100.330702.462501.83040K562PTBP1
ZYG11AENSG00000203995.51163.38490571.641601.0250014.5453013.33860K562PUS1
ZYG11AENSG00000203995.5812.94890556.951200.545505.865405.02950K562RBM15
ZYG11AENSG00000203995.5528.77900665.21650-0.331202.675601.87360K562SF3A3
ZYG11AENSG00000203995.5268.23950437.26400-0.705004.691103.44800K562TIAL1
ZYG11AENSG00000203995.5328.38190464.54150-0.500403.037802.03690K562TRIM56
ZYG11AENSG00000203995.5356.45230528.32250-0.567703.672002.48360K562UCHL5
ZYG11AENSG00000203995.5795.802001064.17230-0.419303.610202.59920K562ZC3H8
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for ZYG11A is not available on ENCORE database.





10 RBPs can affect the splicing of ZYG11A :

Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
SEZYG11AENSG00000203995.5chr1+533515045335156653347142533473375335262753352725-0.235000.000090.00476excludedK562AKAP8L
SEZYG11AENSG00000203995.5chr1+533515045335156653347142533473375335262753352725-0.201000.000730.01316excludedK562PUS1
SEZYG11AENSG00000203995.5chr1+5334626953346501533434445334364153347142533473370.322000.004150.09696includedK562UTP18
SEZYG11AENSG00000203995.5chr1+533515045335156653347142533473375335262753352725-0.289000.000000.00022excludedK562UTP18
SEZYG11AENSG00000203995.5chr1+533515045335156653347142533473375335262753352725-0.216000.002540.07606excludedK562HNRNPU
SEZYG11AENSG00000203995.5chr1+533515045335156653347142533473375335262753352725-0.257000.000010.00073excludedK562RBM15
SEZYG11AENSG00000203995.5chr1+5334626953346501533435965334364153347142533473370.389000.001510.03831includedK562AGGF1
SEZYG11AENSG00000203995.5chr1+533515045335156653347142533473375335262753352725-0.278000.000120.00517excludedK562AGGF1
A3SSZYG11AENSG00000203995.5chr1+533433535334351553343444533435155333339853333449-0.211000.013780.06960shorterK562AQR
A5SSZYG11AENSG00000203995.5chr1+5335262753352838533526275335272553358453533606700.065000.000550.01128longerK562AQR
RIZYG11AENSG00000203995.5chr1+533434445334364153343444533435155334359653343641-0.180000.002540.04458excludedK562PTBP1
MXEZYG11AENSG00000203995.5chr1+5334359653343641533462725334650153343353533435155334714253347337-0.402000.001660.046562includedK562RBM15
MXEZYG11AENSG00000203995.5chr1+5334359653343641533462695334650153343353533435155334714253347337-0.400000.004470.092512includedK562RBM15
MXEZYG11AENSG00000203995.5chr1+5332013653320302533226695332342153308407533086455332640253326543-0.264000.006760.086212includedK562PUS1
MXEZYG11AENSG00000203995.5chr1+5334359653343641533462725334650153343353533435155334714253347337-0.452000.000010.000932includedK562AGGF1
MXEZYG11AENSG00000203995.5chr1+53343596533436415334627253346501533433535334351553347142533473370.296000.000370.021061includedK562FXR1
MXEZYG11AENSG00000203995.5chr1+53332174533322395333339853333449533264025332654353343353533435150.156000.007340.049291includedK562AQR
MXEZYG11AENSG00000203995.5chr1+5332266953323421533264025332654353320136533203025334335353343515-0.144000.013680.081372includedK562AQR
MXEZYG11AENSG00000203995.5chr1+5334359653343641533462725334650153343444533435155334714253347337-0.369000.000340.025912includedK562UTP18
MXEZYG11AENSG00000203995.5chr1+5334359653343641533462725334650153343444533435155334714253347337-0.372000.001420.020882includedK562U2AF2
MXEZYG11AENSG00000203995.5chr1+5334359653343641533462695334650153343444533435155334714253347337-0.391000.001850.025822includedK562U2AF2

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".





The Knockdown/knockout RNA-Seq assay for ZYG11A is not avaliable on ENCORE database.