ST20

General Information

Gene Name : ST20
Gene ID : ENSG00000180953.11
Essential Gene : No

Functions

Not Available

Localization

Not Available

Domains (AlphaFold: ST20)

Not Available

Antibody Validation

Not Avaiable

Expression Level in Cell lines

Cell Line	Gene Name	Ensembl ID	Rep1 TPM	Rep2 TPM	Average TPM	Experiment ID
Gm12878	ST20	ENSG00000180953.11	6.50	9.96	8.23	ENCSR000AEF
HepG2	ST20	ENSG00000180953.11	1.90	2.25	2.08	ENCSR985KAT
K562	ST20	ENSG00000180953.11	3.70	6.46	5.08	ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.

eCLIP

No eCLIP experiment available

Antibody Validation

No Antibody Primary Validation image or Secondary image available

KD RNA-Seq

No KD RNA-Seq experiment available

RNA Bind-n-Seqn

No RBNS experiment available

Localization Image in HepG2

No Localization Information available

RBP	Antibody Info	Primary-HepG2	Secondary-HepG2	Primary-K562	Secondary-K562	Primary-UBERON	Primary-Hela

Summary
Proteins Bound to RBP RNA

RNA Targets

eCLIP assay for ST20 is not avaliable on ENCORE database.

Proteins bound to RNA

ST20 RNA is bound by 18 proteins.

eCLIP assay for ST20 is not avaliable on ENCORE database.

18 proteins are bound to ST20 RNA:

Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name
chr15	80215983	80215998	-	5'-UTR,intron-Distal	3.69754	4.08412	K562	RBM15
chr15	80215959	80215983	-	5'-UTR,intron-Distal	4.54917	6.37184	K562	RBM15
chr15	80215812	80215859	-	5'-UTR,intron-Distal	3.92254	7.34424	K562	CSTF2T
chr15	80215998	80216009	-	5'-UTR,intron-Distal	3.60437	3.04831	K562	RBM15
chr15	80215835	80215895	-	5'-UTR,intron-Distal	6.23671	14.27145	K562	RBM15
chr15	80215982	80216063	-	5'-UTR,intron-Distal,intron-Proximal	3.75959	3.61584	HepG2	SRSF1
chr15	80215945	80215959	-	5'-UTR,intron-Distal	3.78414	3.04831	K562	RBM15
chr15	80215693	80215810	-	5'-UTR,intron-Distal	3.55103	4.65185	K562	SRSF1
chr15	80215835	80215890	-	5'-UTR,intron-Distal	5.11938	7.07194	HepG2	RBM15
chr15	80215093	80215228	-	intron-Distal	3.26139	9.61604	K562	DROSHA
chr15	80215411	80215477	-	intron-Distal	3.31368	3.46269	K562	XRCC6
chr15	80215506	80215567	-	intron-Distal	3.36392	5.12435	HepG2	PRPF4
chr15	80215415	80215498	-	intron-Distal	3.34372	3.65183	HepG2	XRN2
chr15	80212436	80212489	-	intron-Distal	4.19111	3.60290	K562	AKAP8L
chr15	80215385	80215513	-	intron-Distal	4.40783	18.29963	K562	DROSHA
chr15	80215409	80215501	-	intron-Distal	3.11621	12.65647	K562	CSTF2T
chr15	80215408	80215495	-	intron-Distal	3.08675	5.91000	HepG2	NKRF
chr15	80209731	80209906	-	intron-Distal	3.09924	3.90716	K562	KHDRBS1
chr15	80215402	80215484	-	intron-Distal	3.62518	5.57868	K562	DDX6
chr15	80215395	80215510	-	intron-Distal	3.50065	8.38945	HepG2	CSTF2T
chr15	80215407	80215506	-	intron-Distal	4.03687	13.05353	HepG2	PRPF4
chr15	80215422	80215541	-	intron-Distal	3.39989	4.51419	K562	FUS
chr15	80215185	80215245	-	intron-Distal	3.48188	4.01575	K562	NONO
chr15	80214911	80215002	-	intron-Distal	3.06777	3.42451	K562	FUS
chr15	80215433	80215594	-	intron-Distal	3.36193	5.04221	K562	XRN2
chr15	80214898	80214982	-	intron-Distal	3.01324	3.57774	K562	EWSR1
chr15	80215201	80215285	-	intron-Distal	3.34367	5.00504	HepG2	PRPF4
chr15	80215386	80215508	-	intron-Distal	5.80040	9.60274	K562	GTF2F1
chr15	80215152	80215296	-	intron-Distal	3.42267	3.82735	K562	EWSR1
chr15	80215036	80215152	-	intron-Distal	3.92999	3.67595	K562	EWSR1
chr15	80215139	80215251	-	intron-Distal	3.16735	8.31176	K562	CSTF2T
chr15	80206081	80206182	-	intron-Distal	4.93462	7.27974	HepG2	QKI
chr15	80215002	80215126	-	intron-Distal	4.21835	4.16295	K562	FUS
chr15	80215173	80215245	-	intron-Distal	3.20734	5.43751	K562	GTF2F1
chr15	80215396	80215499	-	intron-Distal	3.35440	4.22029	HepG2	DROSHA
chr15	80215498	80215558	-	intron-Distal	3.41478	4.23548	HepG2	RBM15
chr15	80215188	80215265	-	intron-Distal	4.23509	3.30705	HepG2	GTF2F1
chr15	80215265	80215342	-	intron-Distal	3.81778	4.94042	K562	NONO
chr15	80215046	80215111	-	intron-Distal	3.11316	3.68953	K562	NONO
chr15	80215400	80215501	-	intron-Distal	3.59479	8.09998	K562	AKAP8L
chr15	80215412	80215453	-	intron-Distal	3.90942	3.80946	K562	DDX52
chr15	80215282	80215363	-	intron-Distal	5.44152	11.90376	K562	CSTF2T
chr15	80215300	80215318	-	intron-Distal	4.82639	3.11886	K562	DROSHA
chr15	80215416	80215503	-	intron-Distal	3.09667	4.85044	HepG2	GTF2F1
chr15	80215028	80215130	-	intron-Distal	3.70642	11.50274	K562	CSTF2T
chr15	80215076	80215156	-	intron-Distal	4.04032	6.02098	HepG2	PRPF4
chr15	80215442	80215507	-	intron-Distal	3.66203	7.82518	K562	GEMIN5
chr15	80215504	80215549	-	intron-Distal	3.37200	5.87066	K562	CSTF2T
Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name

eCLIP assay for ST20 is not avaliable on ENCORE database.

Summary
DE Affected by

Diffrential Expression

The Knockdown/knockout assay for ST20 is not available on ENCORE database.
26 RBPs can affect the levels of ST20.

The Knockdown/knockout RNA-Seq assay for ST20 is not available on ENCORE database.

26 RBPs can affect the gene expression of ST20 :

Gene Name	Gene ID	KDMean	CNMean	log2(fold change) *	-log(pval) **	-log(padj) **	Cell Line	Affected by RBP	Bound by RBP
ST20	ENSG00000180953.7	51.60150	21.23740	1.28070	2.94550	2.32060	HepG2	ACO1
ST20	ENSG00000180953.7	45.27730	16.18320	1.48420	2.58560	1.71540	HepG2	BCLAF1
ST20	ENSG00000180953.7	76.54670	37.26650	1.03840	2.43750	1.52890	HepG2	CCAR1
ST20	ENSG00000180953.7	55.76540	21.39610	1.38190	2.83770	2.20440	HepG2	DDX3X
ST20	ENSG00000180953.7	59.04290	19.52580	1.59630	3.90410	3.14860	HepG2	EIF4A3
ST20	ENSG00000180953.7	85.95980	43.08130	0.99650	2.80690	2.20250	HepG2	ETF1
ST20	ENSG00000180953.7	39.44120	76.57210	-0.95710	2.14700	1.58580	HepG2	HNRNPLL
ST20	ENSG00000180953.7	80.15760	39.36870	1.02570	2.46720	1.68520	HepG2	LARP4
ST20	ENSG00000180953.7	42.07670	18.06490	1.21970	2.09270	1.45620	HepG2	PABPC4
ST20	ENSG00000180953.7	37.66850	15.09400	1.31930	2.17160	1.62350	HepG2	PCBP1
ST20	ENSG00000180953.7	80.35970	46.77180	0.78070	1.96780	1.37980	HepG2	RPLP0
ST20	ENSG00000180953.7	48.43250	15.11450	1.67990	2.78880	1.84040	HepG2	RPS10
ST20	ENSG00000180953.7	6.92100	26.05390	-1.91240	2.65070	2.01730	HepG2	SAFB2
ST20	ENSG00000180953.7	30.69080	75.79470	-1.30430	3.47000	2.68890	HepG2	SF3B1
ST20	ENSG00000180953.7	131.77520	40.67220	1.69590	9.33810	8.56740	HepG2	SRFBP1
ST20	ENSG00000180953.7	43.68260	16.69080	1.38790	2.27800	1.83820	HepG2	SRSF1
ST20	ENSG00000180953.7	83.51870	28.42680	1.55470	5.56850	4.90700	HepG2	TIAL1
ST20	ENSG00000180953.7	50.50400	16.69130	1.59720	2.69400	1.70230	HepG2	UPF2
ST20	ENSG00000180953.7	72.76090	30.56510	1.25120	3.78210	3.01780	HepG2	ZC3H8
ST20	ENSG00000180953.7	59.37250	95.69210	-0.68860	1.87690	1.39180	K562	AGGF1
ST20	ENSG00000180953.7	56.66200	99.56820	-0.81330	2.48230	1.86310	K562	AKAP8L
ST20	ENSG00000180953.7	132.50420	41.01620	1.69170	8.03420	7.06640	K562	HNRNPC
ST20	ENSG00000180953.7	137.91480	86.57730	0.67160	2.41630	1.43690	K562	HNRNPL
ST20	ENSG00000180953.7	181.67060	102.37360	0.82740	3.85210	2.89460	K562	PUF60
ST20	ENSG00000180953.7	44.66890	82.94080	-0.89280	2.58720	1.79790	K562	SF3A3
ST20	ENSG00000180953.7	16.17850	38.18190	-1.23880	2.27580	1.50230	K562	SF3B4
Gene Name	Gene ID	KDMean	CNMean	log2(fold change)	-log(pval)	-log(padj)	Cell Line	Affected by RBP	Bound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

ST20

General Information

Functions

Localization

Domains (AlphaFold: ST20)

Antibody Validation

Expression Level in Cell lines

Assays

RNA Targets

Proteins bound to RNA

eCLIP assay for ST20 is not avaliable on ENCORE database.

18 proteins are bound to ST20 RNA:

eCLIP assay for ST20 is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout RNA-Seq assay for ST20 is not available on ENCORE database.

26 RBPs can affect the gene expression of ST20 :

The Knockdown/knockout RNA-Seq assay for ST20 is not available on ENCORE database.

No RBPs affect the alternative splcing events of ST20 on ENCORE database.

The Knockdown/knockout RNA-Seq assay for ST20 is not avaliable on ENCORE database.