RP11-419C5.2

General Information

Gene Name : RP11-419C5.2
Gene ID :
Essential Gene : No

Functions

Not Available

Localization

Not Available

Domains (AlphaFold: RP11-419C5.2)

Not Available

Antibody Validation

Not Avaiable

Expression Level in Cell lines

Cell Line	Gene Name	Ensembl ID	Rep1 TPM	Rep2 TPM	Average TPM	Experiment ID

Assays

0 Released experiments are available on ENCORE database.

eCLIP

No eCLIP experiment available

Antibody Validation

No Antibody Primary Validation image or Secondary image available

KD RNA-Seq

No KD RNA-Seq experiment available

RNA Bind-n-Seqn

No RBNS experiment available

Localization Image in HepG2

No Localization Information available

RBP	Antibody Info	Primary-HepG2	Secondary-HepG2	Primary-K562	Secondary-K562	Primary-UBERON	Primary-Hela

Summary
Proteins Bound to RBP RNA

RNA Targets

eCLIP assay for RP11-419C5.2 is not avaliable on ENCORE database.

Proteins bound to RNA

RP11-419C5.2 RNA is bound by 15 proteins.

eCLIP assay for RP11-419C5.2 is not avaliable on ENCORE database.

15 proteins are bound to RP11-419C5.2 RNA:

Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name
chr16	70024282	70024331	-	intron-Distal	3.27589	5.02497	HepG2	DDX59
chr16	70010604	70010637	-	intron-Distal,intron-Proximal	4.28913	8.45770	K562	U2AF2
chr16	70010353	70010417	-	intron-Distal	4.35484	3.71057	HepG2	LSM11
chr16	70030095	70030127	-	intron-Distal,intron-Proximal	3.06734	6.12266	HepG2	BCLAF1
chr16	70029876	70029947	-	intron-Distal,intron-Proximal	4.10660	6.49249	HepG2	EFTUD2
chr16	70010796	70010812	-	intron-Distal	4.97761	6.84553	HepG2	U2AF2
chr16	70010632	70010649	-	intron-Distal,intron-Proximal	5.45259	15.82824	HepG2	U2AF2
chr16	70016260	70016291	-	intron-Distal	3.84603	8.50755	HepG2	BCLAF1
chr16	70010640	70010649	-	intron-Distal,intron-Proximal	4.28913	8.45770	K562	U2AF2
chr16	70016289	70016370	-	intron-Distal,intron-Proximal	3.58906	4.22563	K562	UCHL5
chr16	70020288	70020319	-	intron-Distal	4.29643	4.69889	HepG2	GRWD1
chr16	70010634	70010648	-	intron-Distal,intron-Proximal	3.80013	3.00221	HepG2	U2AF1
chr16	70016628	70016658	-	intron-Distal	3.52729	5.14253	HepG2	GRWD1
chr16	70010607	70010632	-	intron-Distal,intron-Proximal	5.44046	15.82824	HepG2	U2AF2
chr16	70010608	70010634	-	intron-Distal,intron-Proximal	3.80013	3.00221	HepG2	U2AF1
chr16	70024560	70024597	-	intron-Distal,intron-Proximal	3.28809	6.00907	HepG2	PPIG
chr16	70016257	70016320	-	intron-Distal	3.22553	3.71240	HepG2	PABPN1
chr16	70010804	70010828	-	intron-Distal	4.01109	3.66257	HepG2	U2AF1
chr16	70023882	70024037	-	intron-Distal,intron-Proximal	6.26220	14.12285	HepG2	DDX59
chr16	70011982	70012015	-	intron-Distal,intron-Proximal	3.51638	5.28199	HepG2	GRWD1
chr16	70020350	70020418	-	intron-Distal,intron-Proximal	3.39059	5.19836	HepG2	U2AF2
chr16	70020319	70020401	-	intron-Distal	4.13158	7.80656	HepG2	GRWD1
chr16	70016270	70016324	-	intron-Distal	3.49845	10.76242	HepG2	GRWD1
chr16	70026680	70026767	-	intron-Distal	3.02042	6.60473	HepG2	RBFOX2
chr16	70016258	70016270	-	intron-Distal	4.51638	6.50203	HepG2	GRWD1
chr16	70024558	70024606	-	intron-Distal,intron-Proximal	4.98941	8.55860	HepG2	SF3A3
chr16	70010786	70010802	-	intron-Distal	3.98663	3.66257	HepG2	U2AF1
chr16	70016325	70016379	-	intron-Distal,intron-Proximal	3.61553	9.01874	HepG2	BCLAF1
chr16	70024551	70024603	-	intron-Distal,intron-Proximal	3.85141	14.43939	HepG2	U2AF2
chr16	70016569	70016601	-	intron-Distal	3.72509	6.97808	HepG2	BCLAF1
chr16	70020339	70020406	-	intron-Distal	5.18367	14.17165	HepG2	BCLAF1
chr16	70024789	70024873	-	intron-Distal	5.02975	6.93191	K562	KHSRP
chr16	70011121	70011165	-	intron-Distal	3.57937	6.17334	HepG2	U2AF2
chr16	70010441	70010510	-	intron-Distal	4.43591	5.05521	HepG2	PABPN1
chr16	70016324	70016389	-	intron-Distal,intron-Proximal	3.28197	7.54801	HepG2	GRWD1
chr16	70030070	70030127	-	intron-Distal,intron-Proximal	3.85637	5.37538	K562	ZNF622
chr16	70010812	70010827	-	intron-Distal	5.00967	7.19009	HepG2	U2AF2
chr16	70024190	70024274	-	intron-Distal,intron-Proximal	4.99871	4.97123	HepG2	PCBP2
Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name

eCLIP assay for RP11-419C5.2 is not avaliable on ENCORE database.

Summary
DE Affected by

Diffrential Expression

The Knockdown/knockout assay for RP11-419C5.2 is not available on ENCORE database.
44 RBPs can affect the levels of RP11-419C5.2.

The Knockdown/knockout RNA-Seq assay for RP11-419C5.2 is not available on ENCORE database.

44 RBPs can affect the gene expression of RP11-419C5.2 :

Gene Name	Gene ID	KDMean	CNMean	log2(fold change) *	-log(pval) **	-log(padj) **	Cell Line	Affected by RBP	Bound by RBP
RP11-419C5.2	ENSG00000226232.4	32.68440	69.25340	-1.08330	2.25050	1.76630	HepG2	AKAP1
RP11-419C5.2	ENSG00000226232.4	206.82990	107.07990	0.94970	2.60290	1.66070	HepG2	CCAR1
RP11-419C5.2	ENSG00000226232.4	89.28480	27.99010	1.67340	2.46010	1.80660	HepG2	CPSF6
RP11-419C5.2	ENSG00000226232.4	22.96080	57.88510	-1.33400	2.87270	1.77710	HepG2	CSTF2
RP11-419C5.2	ENSG00000226232.4	91.12860	167.02930	-0.87410	4.50470	3.71930	HepG2	CELF1
RP11-419C5.2	ENSG00000226232.4	116.76360	179.63500	-0.62150	3.14780	2.36490	HepG2	DAZAP1
RP11-419C5.2	ENSG00000226232.4	217.45360	54.77670	1.98900	14.77360	13.47290	HepG2	EIF2S1
RP11-419C5.2	ENSG00000226232.4	111.36510	60.52670	0.87960	2.23220	1.65610	HepG2	EIF4A3
RP11-419C5.2	ENSG00000226232.4	119.56390	49.03390	1.28580	5.10390	4.04810	HepG2	FUBP3
RP11-419C5.2	ENSG00000226232.4	113.78700	61.09300	0.89720	2.72550	2.03940	HepG2	FXR1
RP11-419C5.2	ENSG00000226232.4	118.20140	56.66000	1.06070	1.92920	1.36870	HepG2	G3BP1
RP11-419C5.2	ENSG00000226232.4	171.14910	60.16850	1.50810	8.30120	6.74070	HepG2	G3BP2
RP11-419C5.2	ENSG00000226232.4	72.35900	31.71380	1.19000	2.31200	1.72370	HepG2	GPKOW
RP11-419C5.2	ENSG00000226232.4	166.50020	57.40300	1.53620	8.16570	7.01380	HepG2	HNRNPK
RP11-419C5.2	ENSG00000226232.4	108.07070	30.26640	1.83610	2.38020	1.79130	HepG2	HNRNPLL
RP11-419C5.2	ENSG00000226232.4	161.45050	93.23640	0.79200	2.46100	1.76540	HepG2	ILF2
RP11-419C5.2	ENSG00000226232.4	147.63420	57.93330	1.34950	5.68600	4.19750	HepG2	KHSRP
RP11-419C5.2	ENSG00000226232.4	245.29260	137.09340	0.83920	3.13880	1.80370	HepG2	KRR1
RP11-419C5.2	ENSG00000226232.4	112.28890	61.11440	0.87750	2.65040	2.00820	HepG2	MAGOH
RP11-419C5.2	ENSG00000226232.4	117.50720	30.90090	1.92690	3.50300	2.40380	HepG2	MTPAP
RP11-419C5.2	ENSG00000226232.4	36.49650	84.55640	-1.21220	3.02470	1.87890	HepG2	NONO
RP11-419C5.2	ENSG00000226232.4	70.15130	26.84800	1.38560	3.15150	2.35400	HepG2	NSUN2
RP11-419C5.2	ENSG00000226232.4	130.52240	55.99920	1.22070	5.14430	4.17200	HepG2	PABPC4
RP11-419C5.2	ENSG00000226232.4	86.62510	180.47610	-1.05900	2.13840	1.60360	HepG2	PUM1
RP11-419C5.2	ENSG00000226232.4	178.93740	85.18200	1.07070	5.62980	4.78520	HepG2	QKI
RP11-419C5.2	ENSG00000226232.4	60.08160	154.55990	-1.36320	7.37530	6.62480	HepG2	RBM22
RP11-419C5.2	ENSG00000226232.4	34.15310	69.14730	-1.01770	2.62200	2.02270	HepG2	RPS19
RP11-419C5.2	ENSG00000226232.4	91.28580	33.32670	1.45360	3.86760	2.93620	HepG2	SNRNP70
RP11-419C5.2	ENSG00000226232.4	71.23270	174.56230	-1.29310	8.47650	7.73060	HepG2	SRFBP1
RP11-419C5.2	ENSG00000226232.4	94.33770	167.85960	-0.83130	4.13630	3.40000	HepG2	SRSF5
RP11-419C5.2	ENSG00000226232.4	110.73660	190.91510	-0.78580	2.70140	2.08520	HepG2	SUCLG1
RP11-419C5.2	ENSG00000226232.4	181.50750	76.83300	1.24010	4.95670	4.24090	HepG2	TAF15
RP11-419C5.2	ENSG00000226232.4	95.76350	29.54050	1.69670	6.15700	5.13580	HepG2	TARDBP
RP11-419C5.2	ENSG00000226232.4	203.06370	70.59370	1.52420	12.06460	10.34930	HepG2	TIA1
RP11-419C5.2	ENSG00000226232.4	63.35330	125.46090	-0.98570	3.36740	2.67970	HepG2	U2AF1
RP11-419C5.2	ENSG00000226232.4	69.77930	175.78700	-1.33300	5.47950	4.27710	HepG2	UBE2L3
RP11-419C5.2	ENSG00000226232.4	61.86800	139.01020	-1.16790	5.52060	4.72250	HepG2	UTP3
RP11-419C5.2	ENSG00000226232.4	163.79840	90.27140	0.85950	3.30040	2.51340	HepG2	XRN2
RP11-419C5.2	ENSG00000226232.4	220.11680	158.35440	0.47500	2.33910	1.82390	HepG2	ZNF622
RP11-419C5.2	ENSG00000226232.4	25.48920	50.86040	-0.99670	1.95030	1.42490	K562	FXR1
RP11-419C5.2	ENSG00000226232.4	25.27780	77.32050	-1.61300	5.39430	2.89770	K562	PABPC4
RP11-419C5.2	ENSG00000226232.4	19.65840	50.40820	-1.35850	3.23680	2.52430	K562	PTBP1
RP11-419C5.2	ENSG00000226232.4	34.75580	70.50380	-1.02040	2.27560	1.77350	K562	PUS1
RP11-419C5.2	ENSG00000226232.4	22.05260	69.38390	-1.65370	4.65080	2.84890	K562	RBM25
RP11-419C5.2	ENSG00000226232.4	7.50630	34.18400	-2.18720	3.77210	1.81310	K562	TFIP11
RP11-419C5.2	ENSG00000226232.4	119.26650	55.70950	1.09810	4.70290	3.79180	K562	UPF1
Gene Name	Gene ID	KDMean	CNMean	log2(fold change)	-log(pval)	-log(padj)	Cell Line	Affected by RBP	Bound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

RP11-419C5.2

General Information

Functions

Localization

Domains (AlphaFold: RP11-419C5.2)

Antibody Validation

Expression Level in Cell lines

Assays

RNA Targets

Proteins bound to RNA

eCLIP assay for RP11-419C5.2 is not avaliable on ENCORE database.

15 proteins are bound to RP11-419C5.2 RNA:

eCLIP assay for RP11-419C5.2 is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout RNA-Seq assay for RP11-419C5.2 is not available on ENCORE database.

44 RBPs can affect the gene expression of RP11-419C5.2 :

The Knockdown/knockout RNA-Seq assay for RP11-419C5.2 is not available on ENCORE database.

No RBPs affect the alternative splcing events of RP11-419C5.2 on ENCORE database.

The Knockdown/knockout RNA-Seq assay for RP11-419C5.2 is not avaliable on ENCORE database.