NDUFAF1

General Information

Gene Name       : NDUFAF1
Gene ID             : ENSG00000137806.8
Essential Gene : Yes

Functions

Localization

Domains (AlphaFold: NDUFAF1)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878NDUFAF1ENSG00000137806.821.3716.0218.70ENCSR000AEF
HepG2NDUFAF1ENSG00000137806.85.1212.198.65ENCSR985KAT
K562NDUFAF1ENSG00000137806.823.9527.2825.62ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for NDUFAF1 is not avaliable on ENCORE database.



Proteins bound to RNA
  • NDUFAF1 RNA is bound by 1 proteins.  







eCLIP assay for NDUFAF1 is not avaliable on ENCORE database.





1 proteins are bound to NDUFAF1 RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr154169458041694625-5'-UTR,intron-Distal4.649434.97000K562DDX3X
chr154169451841694580-5'-UTR,intron-Distal4.116696.19788K562DDX3X
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for NDUFAF1 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for NDUFAF1 is not available on ENCORE database.

  • 56 RBPs can affect the levels of NDUFAF1.  








The Knockdown/knockout RNA-Seq assay for NDUFAF1 is not available on ENCORE database.





56 RBPs can affect the gene expression of NDUFAF1 :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
NDUFAF1ENSG00000137806.4250.39750107.767501.2162010.938409.89700HepG2ACO1
NDUFAF1ENSG00000137806.475.94570122.97180-0.695302.211201.31920HepG2ADAR
NDUFAF1ENSG00000137806.4603.44770161.317101.9032022.8214021.45760HepG2AKAP1
NDUFAF1ENSG00000137806.4214.73430107.761600.994607.067906.09540HepG2CKAP4
NDUFAF1ENSG00000137806.495.26730149.07490-0.646002.202901.58110HepG2CPSF6
NDUFAF1ENSG00000137806.4367.55370154.532001.2499010.333409.19300HepG2DDX3X
NDUFAF1ENSG00000137806.4140.8090080.258100.810902.910401.77470HepG2EFTUD2
NDUFAF1ENSG00000137806.4119.52070205.44760-0.781504.109703.25350HepG2HNRNPF
NDUFAF1ENSG00000137806.4179.38040110.130900.703702.750201.61850HepG2LARP7
NDUFAF1ENSG00000137806.4236.67080142.334000.733503.419702.69000HepG2MAGOH
NDUFAF1ENSG00000137806.4239.49210143.132000.742503.235002.55710HepG2MATR3
NDUFAF1ENSG00000137806.4134.50570202.09240-0.587302.383901.67700HepG2NOL12
NDUFAF1ENSG00000137806.4182.30920102.153000.835603.403302.25480HepG2PCBP2
NDUFAF1ENSG00000137806.480.50400123.19890-0.613902.062001.41760HepG2PPIL4
NDUFAF1ENSG00000137806.4186.22790119.233500.643202.285701.54800HepG2PRPF8
NDUFAF1ENSG00000137806.4204.21080138.097700.564302.807302.25620HepG2PTBP1
NDUFAF1ENSG00000137806.4417.97200221.852000.913708.887608.08050HepG2RBM22
NDUFAF1ENSG00000137806.4211.18910110.655200.932402.426001.79560HepG2SF3A3
NDUFAF1ENSG00000137806.4250.25800143.774200.799504.839704.09150HepG2SF3B4
NDUFAF1ENSG00000137806.4173.26380100.466100.786203.175302.14210HepG2SMNDC1
NDUFAF1ENSG00000137806.4302.67650150.070501.012008.011307.30330HepG2SRSF1
NDUFAF1ENSG00000137806.4191.94030115.225800.736103.074602.41460HepG2U2AF1
NDUFAF1ENSG00000137806.4180.70800108.413400.737002.791101.73230HepG2XRCC6
NDUFAF1ENSG00000137806.4162.39090107.929000.589302.531502.00190HepG2ZNF622
NDUFAF1ENSG00000137806.4529.06450836.45690-0.660806.134505.31990K562AQR
NDUFAF1ENSG00000137806.4273.01680410.29370-0.587703.313001.72800K562BUD13
NDUFAF1ENSG00000137806.4129.64600196.74750-0.601802.679001.64680K562CCAR1
NDUFAF1ENSG00000137806.4805.124601056.36310-0.391803.110402.07630K562CELF1
NDUFAF1ENSG00000137806.4492.01060331.040200.571603.193201.81040K562EEF2
NDUFAF1ENSG00000137806.4283.69780425.56910-0.585004.354503.36640K562EIF3G
NDUFAF1ENSG00000137806.4199.35300287.35220-0.527503.224201.95920K562EIF4B
NDUFAF1ENSG00000137806.4623.02930859.25850-0.463804.326403.16060K562EIF4G2
NDUFAF1ENSG00000137806.4207.53410294.30850-0.504002.682501.43830K562EXOSC5
NDUFAF1ENSG00000137806.4315.10980413.00360-0.390302.381001.33130K562GLRX3
NDUFAF1ENSG00000137806.4340.29140450.43560-0.404602.509801.48570K562HNRNPA1
NDUFAF1ENSG00000137806.4179.60110382.14210-1.089305.371804.56570K562HNRNPC
NDUFAF1ENSG00000137806.4780.50230481.469800.696903.633502.19440K562HNRNPK
NDUFAF1ENSG00000137806.4623.01890348.277200.838907.363305.73360K562HNRNPM
NDUFAF1ENSG00000137806.4343.87830498.81710-0.536604.444303.30340K562HNRNPU
NDUFAF1ENSG00000137806.4351.10370481.78690-0.456502.193501.30930K562IGF2BP2
NDUFAF1ENSG00000137806.4343.94310434.21760-0.336202.056301.35400K562MTPAP
NDUFAF1ENSG00000137806.4342.60160482.46480-0.493904.443803.52320K562NSUN2
NDUFAF1ENSG00000137806.4607.25350450.762300.429802.781501.79880K562PCBP2
NDUFAF1ENSG00000137806.4599.20070374.360800.678505.042003.91950K562PCBP3
NDUFAF1ENSG00000137806.4551.72330287.163700.942002.945102.11730K562POLR2G
NDUFAF1ENSG00000137806.4534.40400311.285100.779606.437905.29510K562PRPF8
NDUFAF1ENSG00000137806.4748.91030492.145800.605606.064705.11380K562PTBP1
NDUFAF1ENSG00000137806.41401.71980937.536800.580206.288205.06210K562PUF60
NDUFAF1ENSG00000137806.4180.49540296.22130-0.714703.971202.67220K562SRFBP1
NDUFAF1ENSG00000137806.4328.00170455.56570-0.474002.940501.85270K562SRSF5
NDUFAF1ENSG00000137806.4321.43040438.98480-0.449702.915701.59660K562SSB
NDUFAF1ENSG00000137806.4392.93190288.010300.448102.706401.89780K562SYNCRIP
NDUFAF1ENSG00000137806.4173.65110329.54390-0.924306.078104.63460K562TIAL1
NDUFAF1ENSG00000137806.4209.87370349.96620-0.737704.798503.47230K562TRIM56
NDUFAF1ENSG00000137806.4330.54340511.56680-0.630106.495905.44920K562UPF1
NDUFAF1ENSG00000137806.4285.51960437.73290-0.616504.744403.58360K562WDR3
NDUFAF1ENSG00000137806.4341.27760455.18250-0.415503.201402.29690K562WDR43
NDUFAF1ENSG00000137806.4773.54520990.87170-0.357202.777501.48480K562WRN
NDUFAF1ENSG00000137806.4538.43740942.38290-0.8075010.741308.90760K562ZC3H8
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for NDUFAF1 is not available on ENCORE database.





2 RBPs can affect the splicing of NDUFAF1 :

Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
SENDUFAF1ENSG00000137806.4chr15-4168630241686556416806454168072041687056416872420.458000.000420.03404includedHepG2HNRNPL
SENDUFAF1ENSG00000137806.4chr15-4168630241686556416806454168072041687056416872420.225000.002740.08081includedK562HNRNPU

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".





The Knockdown/knockout RNA-Seq assay for NDUFAF1 is not avaliable on ENCORE database.