DNAAF2

General Information

Gene Name       : DNAAF2
Gene ID             : ENSG00000165506.14
Essential Gene : No

Functions

Localization

Domains (AlphaFold: DNAAF2)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878DNAAF2ENSG00000165506.147.826.997.41ENCSR000AEF
HepG2DNAAF2ENSG00000165506.145.419.557.48ENCSR985KAT
K562DNAAF2ENSG00000165506.148.087.647.86ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for DNAAF2 is not avaliable on ENCORE database.



Proteins bound to RNA
  • DNAAF2 RNA is bound by 3 proteins.  







eCLIP assay for DNAAF2 is not avaliable on ENCORE database.





3 proteins are bound to DNAAF2 RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr145009191750091981-3'-UTR,intron-Distal5.643995.76336K562PUM2
chr145010034550100471-CDS,intron-Distal4.707264.88132HepG2RBM15
chr145010047250100552-CDS,intron-Distal3.203473.66170HepG2DDX3X
chr145010038550100472-CDS,intron-Distal4.305716.96497HepG2DDX3X
chr145010055250100670-CDS,intron-Distal6.2774217.66846HepG2DDX3X
chr145010052450100654-CDS,intron-Distal3.569155.59242K562DDX3X
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for DNAAF2 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for DNAAF2 is not available on ENCORE database.

  • 44 RBPs can affect the levels of DNAAF2.  








The Knockdown/knockout RNA-Seq assay for DNAAF2 is not available on ENCORE database.





44 RBPs can affect the gene expression of DNAAF2 :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
DNAAF2ENSG00000165506.10259.18590357.40000-0.463601.962501.43440HepG2DDX6
DNAAF2ENSG00000165506.10225.63400343.64040-0.606903.138302.50830HepG2EIF2S1
DNAAF2ENSG00000165506.10223.90220153.348000.546002.129001.32730HepG2EIF3D
DNAAF2ENSG00000165506.10416.53290305.330800.448002.702301.87680HepG2EWSR1
DNAAF2ENSG00000165506.10167.49440275.28700-0.716803.458902.74910HepG2GPKOW
DNAAF2ENSG00000165506.10178.70450262.86150-0.556702.429501.77650HepG2HNRNPC
DNAAF2ENSG00000165506.10197.88320261.12370-0.400101.915301.40220HepG2HNRNPU
DNAAF2ENSG00000165506.10197.85870292.89690-0.565903.109802.34540HepG2IGF2BP1
DNAAF2ENSG00000165506.10149.82130232.90160-0.636503.565902.73980HepG2PPIL4
DNAAF2ENSG00000165506.10294.24470418.30520-0.507503.196802.56250HepG2PUF60
DNAAF2ENSG00000165506.10346.15230443.72170-0.358202.043301.46140HepG2PUM2
DNAAF2ENSG00000165506.10116.71220238.95240-1.033804.167003.31020HepG2RAVER1
DNAAF2ENSG00000165506.10630.04700516.590700.286301.881301.43260HepG2RBM22
DNAAF2ENSG00000165506.10212.77150320.39570-0.590603.052702.34080HepG2RPLP0
DNAAF2ENSG00000165506.10142.16370232.54250-0.709904.348903.57280HepG2SAFB2
DNAAF2ENSG00000165506.10146.97720244.12700-0.732003.087902.07070HepG2SMNDC1
DNAAF2ENSG00000165506.10492.60350391.821200.330101.826601.41970HepG2SRSF1
DNAAF2ENSG00000165506.10179.35260292.22180-0.704304.967304.07590HepG2SRSF7
DNAAF2ENSG00000165506.10249.52890352.13270-0.496903.126302.53530HepG2TAF15
DNAAF2ENSG00000165506.10143.83310253.73270-0.818905.315104.66830HepG2TIAL1
DNAAF2ENSG00000165506.10187.59080255.99850-0.448502.335101.80810HepG2TRIM56
DNAAF2ENSG00000165506.10160.94020275.41780-0.775106.041205.31470HepG2ZNF622
DNAAF2ENSG00000165506.10139.67390209.01170-0.581502.603802.05000K562AGGF1
DNAAF2ENSG00000165506.10308.52180579.91370-0.910503.922203.24740K562AQR
DNAAF2ENSG00000165506.10189.53790279.15960-0.558602.552101.71550K562BOP1
DNAAF2ENSG00000165506.10189.17820296.82760-0.649903.858602.93270K562CPSF6
DNAAF2ENSG00000165506.10124.37750185.02330-0.573002.434601.45990K562DDX3X
DNAAF2ENSG00000165506.10510.94330360.165400.504404.384703.59030K562DDX47
DNAAF2ENSG00000165506.10286.44490379.39670-0.405402.383001.70730K562EIF2S2
DNAAF2ENSG00000165506.10199.78140302.01340-0.596203.093902.18460K562FMR1
DNAAF2ENSG00000165506.10154.78600255.98290-0.725803.773402.69080K562FTO
DNAAF2ENSG00000165506.10184.55140283.39800-0.618803.216102.36200K562GPKOW
DNAAF2ENSG00000165506.10106.39020176.16040-0.727502.922102.31090K562HNRNPC
DNAAF2ENSG00000165506.10158.51350241.98470-0.610302.234301.40510K562KRR1
DNAAF2ENSG00000165506.10160.23330276.62780-0.787804.665903.50840K562METAP2
DNAAF2ENSG00000165506.10118.25800229.68210-0.957703.180202.09880K562PABPN1
DNAAF2ENSG00000165506.10135.27130273.16510-1.013903.563201.83530K562PPP1R8
DNAAF2ENSG00000165506.10107.91100215.69830-0.999205.115004.40530K562PUS1
DNAAF2ENSG00000165506.10140.94990210.15420-0.576302.556501.98340K562RBM15
DNAAF2ENSG00000165506.10213.12360301.89090-0.502302.974802.13130K562SF3A3
DNAAF2ENSG00000165506.10173.12890269.51910-0.638502.897801.90070K562SF3B1
DNAAF2ENSG00000165506.10126.22120241.20620-0.934303.011201.71040K562SNRNP200
DNAAF2ENSG00000165506.10330.59730225.306500.553102.308201.65500K562SRSF1
DNAAF2ENSG00000165506.10167.27590239.05730-0.515102.585301.45700K562SRSF7
DNAAF2ENSG00000165506.10153.80920288.58190-0.907803.132401.58140K562SUPT6H
DNAAF2ENSG00000165506.10264.12440161.463500.709904.261203.23530K562SYNCRIP
DNAAF2ENSG00000165506.10144.97260277.62160-0.937306.925305.50010K562WDR3
DNAAF2ENSG00000165506.10434.07100653.41800-0.590102.693001.84340K562ZC3H8
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for DNAAF2 is not available on ENCORE database.





5 RBPs can affect the splicing of DNAAF2 :

Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
SEDNAAF2ENSG00000165506.10chr14-5009472950094873500918915009276650100004501019480.226000.003550.05779includedK562SRSF1
SEDNAAF2ENSG00000165506.10chr14-500947295009487350091891500927665010000450101948-0.336000.000000.00007excludedK562SF3B4
SEDNAAF2ENSG00000165506.10chr14-5009472950094873500918915009276650100004501019480.181000.001050.02666includedHepG2SRSF1
SEDNAAF2ENSG00000165506.10chr14-500947295009487350091891500927665010000450101948-0.175000.002300.07580excludedK562SF3B1
SEDNAAF2ENSG00000165506.10chr14-5009472950094873500918915009276650100004501019480.250000.000140.03695includedK562SAFB
A3SSDNAAF2ENSG00000165506.10chr14-5009472950094902500947295009487350100004501019480.173000.000050.00044longerK562AQR

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".





The Knockdown/knockout RNA-Seq assay for DNAAF2 is not avaliable on ENCORE database.