CTD-2540B15.13

General Information

Gene Name       : CTD-2540B15.13
Gene ID             :
Essential Gene : No

Functions

Localization

Domains (AlphaFold: CTD-2540B15.13)


Antibody Validation


Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for CTD-2540B15.13 is not avaliable on ENCORE database.



Proteins bound to RNA

  • NO known proteins bind on CTD-2540B15.13 RNA with finished eCLIP experiments on ENCORE database.





eCLIP assay for CTD-2540B15.13 is not avaliable on ENCORE database.






NO known proteins are bound to CTD-2540B15.13 RNA with finished eCLIP experiments on ENCORE database.





eCLIP assay for CTD-2540B15.13 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for CTD-2540B15.13 is not available on ENCORE database.

  • 46 RBPs can affect the levels of CTD-2540B15.13.  








The Knockdown/knockout RNA-Seq assay for CTD-2540B15.13 is not available on ENCORE database.





46 RBPs can affect the gene expression of CTD-2540B15.13 :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
CTD-2540B15.13ENSG00000273420.1157.3062074.280001.082403.722302.63700HepG2ABCF1
CTD-2540B15.13ENSG00000273420.115.959201.140703.806402.864201.90940HepG2BCCIP
CTD-2540B15.13ENSG00000273420.148.9825018.822901.379702.177401.61530HepG2DDX3X
CTD-2540B15.13ENSG00000273420.118.860800.0000099999.999906.548305.60410HepG2DNAJC2
CTD-2540B15.13ENSG00000273420.18.5672064.71010-2.917109.548608.13360HepG2FUBP3
CTD-2540B15.13ENSG00000273420.145.9348017.307301.408102.476401.82120HepG2FXR1
CTD-2540B15.13ENSG00000273420.115.351000.0000099999.999904.896004.10900HepG2HNRNPU
CTD-2540B15.13ENSG00000273420.180.5812043.864600.877302.010501.31030HepG2LARP4
CTD-2540B15.13ENSG00000273420.165.6227017.313201.922203.657802.90380HepG2MAGOH
CTD-2540B15.13ENSG00000273420.168.5480017.416301.976604.580203.78640HepG2MATR3
CTD-2540B15.13ENSG00000273420.154.9930017.831601.624703.608102.88890HepG2NCBP2
CTD-2540B15.13ENSG00000273420.119.245300.0000099999.999906.599305.42650HepG2NOL12
CTD-2540B15.13ENSG00000273420.143.289906.460002.744305.548503.54810HepG2NOLC1
CTD-2540B15.13ENSG00000273420.134.121101.024305.057807.057505.29240HepG2NONO
CTD-2540B15.13ENSG00000273420.142.519500.0000099999.999908.514105.17900HepG2NUFIP2
CTD-2540B15.13ENSG00000273420.111.114700.0000099999.999903.213602.25190HepG2PABPC1
CTD-2540B15.13ENSG00000273420.153.4488020.439601.386703.401202.74370HepG2PCBP1
CTD-2540B15.13ENSG00000273420.136.255100.0000099999.9999012.3749010.88490HepG2PPIL4
CTD-2540B15.13ENSG00000273420.119.3355048.47250-1.325902.655701.89620HepG2PRPF4
CTD-2540B15.13ENSG00000273420.130.290400.0000099999.999902.314501.76280HepG2PUF60
CTD-2540B15.13ENSG00000273420.122.138000.0000099999.999907.787206.89720HepG2PUM1
CTD-2540B15.13ENSG00000273420.133.910400.0000099999.999905.274201.99590HepG2RBFOX2
CTD-2540B15.13ENSG00000273420.130.737000.0000099999.999907.776906.10280HepG2RBM27
CTD-2540B15.13ENSG00000273420.150.9396023.147401.137802.222401.72670HepG2NELFE
CTD-2540B15.13ENSG00000273420.117.226500.0000099999.999904.460003.45680HepG2RPS2
CTD-2540B15.13ENSG00000273420.121.605200.0000099999.999906.104504.92170HepG2RPS3A
CTD-2540B15.13ENSG00000273420.134.810800.0000099999.999906.882405.93340HepG2SAFB2
CTD-2540B15.13ENSG00000273420.148.136200.0000099999.999906.892704.59780HepG2SF1
CTD-2540B15.13ENSG00000273420.1109.6180055.109200.992003.537702.77160HepG2SF3A3
CTD-2540B15.13ENSG00000273420.142.635800.0000099999.999907.647005.04360HepG2SFPQ
CTD-2540B15.13ENSG00000273420.119.256500.0000099999.999903.783502.98320HepG2SLBP
CTD-2540B15.13ENSG00000273420.18.694900.0000099999.999902.548801.92680HepG2SMN1
CTD-2540B15.13ENSG00000273420.119.520903.378902.530303.036402.02940HepG2SMNDC1
CTD-2540B15.13ENSG00000273420.130.563800.0000099999.999903.892702.27480HepG2SNRNP200
CTD-2540B15.13ENSG00000273420.112.3073052.84760-2.102302.378101.65560HepG2SNRNP70
CTD-2540B15.13ENSG00000273420.11.5034022.60130-3.910104.602404.03110HepG2SRSF1
CTD-2540B15.13ENSG00000273420.131.072300.0000099999.999904.220803.47640HepG2SRSF5
CTD-2540B15.13ENSG00000273420.15.0270018.38990-1.871201.866501.39720HepG2SRSF9
CTD-2540B15.13ENSG00000273420.18.163700.0000099999.999902.484401.45090HepG2STIP1
CTD-2540B15.13ENSG00000273420.125.013900.0000099999.999908.193007.21860HepG2SUCLG1
CTD-2540B15.13ENSG00000273420.11.5809020.32300-3.684304.103903.44210HepG2TAF15
CTD-2540B15.13ENSG00000273420.118.875300.0000099999.999905.764405.09290HepG2TIAL1
CTD-2540B15.13ENSG00000273420.130.141500.0000099999.999903.415802.80370HepG2TRIM56
CTD-2540B15.13ENSG00000273420.133.770600.0000099999.999905.178603.80220HepG2U2AF2
CTD-2540B15.13ENSG00000273420.121.240300.0000099999.999902.750901.91700HepG2UBE2L3
CTD-2540B15.13ENSG00000273420.122.792401.099504.373604.211103.32340HepG2XRN2
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for CTD-2540B15.13 is not available on ENCORE database.






No RBPs affect the alternative splcing events of CTD-2540B15.13 on ENCORE database.





The Knockdown/knockout RNA-Seq assay for CTD-2540B15.13 is not avaliable on ENCORE database.