CAPN10-AS1

General Information

Gene Name       : CAPN10-AS1
Gene ID             :
Essential Gene : No

Functions

Localization

Domains (AlphaFold: CAPN10-AS1)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for CAPN10-AS1 is not avaliable on ENCORE database.



Proteins bound to RNA

  • NO known proteins bind on CAPN10-AS1 RNA with finished eCLIP experiments on ENCORE database.





eCLIP assay for CAPN10-AS1 is not avaliable on ENCORE database.






NO known proteins are bound to CAPN10-AS1 RNA with finished eCLIP experiments on ENCORE database.





eCLIP assay for CAPN10-AS1 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for CAPN10-AS1 is not available on ENCORE database.

  • 44 RBPs can affect the levels of CAPN10-AS1.  








The Knockdown/knockout RNA-Seq assay for CAPN10-AS1 is not available on ENCORE database.





44 RBPs can affect the gene expression of CAPN10-AS1 :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
CAPN10-AS1ENSG00000260942.143.37030126.29220-1.542006.056305.30370HepG2AKAP1
CAPN10-AS1ENSG00000260942.1108.27200161.21850-0.574402.332901.69350HepG2AUH
CAPN10-AS1ENSG00000260942.153.8292096.69790-0.845102.553401.81160HepG2CALR
CAPN10-AS1ENSG00000260942.1156.8143099.886600.650602.119801.59310HepG2EIF2S1
CAPN10-AS1ENSG00000260942.1181.1021061.482401.558509.659906.45150HepG2EXOSC5
CAPN10-AS1ENSG00000260942.1214.1319081.302801.397009.358106.44360HepG2EXOSC9
CAPN10-AS1ENSG00000260942.1110.4526061.946200.834202.519801.76870HepG2FUBP3
CAPN10-AS1ENSG00000260942.1198.32170109.735000.853703.879502.81370HepG2G3BP2
CAPN10-AS1ENSG00000260942.1256.70680104.703401.293708.820207.62550HepG2HNRNPK
CAPN10-AS1ENSG00000260942.1164.31750104.524600.652502.936102.31330HepG2HNRNPU
CAPN10-AS1ENSG00000260942.1169.88030105.013400.693802.477601.83470HepG2IGF2BP2
CAPN10-AS1ENSG00000260942.1192.53310111.457700.788503.164202.46280HepG2MAGOH
CAPN10-AS1ENSG00000260942.1202.82690114.702300.822303.574202.85810HepG2NCBP2
CAPN10-AS1ENSG00000260942.1125.74570190.20960-0.597103.155802.53200HepG2PUM1
CAPN10-AS1ENSG00000260942.1209.17080132.504400.658502.443901.51760HepG2RBM27
CAPN10-AS1ENSG00000260942.1202.03660110.711700.867704.534503.87340HepG2NELFE
CAPN10-AS1ENSG00000260942.1162.68760103.569000.651402.508101.94110HepG2SF3B4
CAPN10-AS1ENSG00000260942.1116.94850176.91170-0.597202.165801.60440HepG2SRSF5
CAPN10-AS1ENSG00000260942.1256.29020151.706500.756404.984204.33490HepG2SSB
CAPN10-AS1ENSG00000260942.190.74140201.21410-1.148908.219007.24250HepG2SUCLG1
CAPN10-AS1ENSG00000260942.1166.8910097.174400.780203.576002.95360HepG2TAF15
CAPN10-AS1ENSG00000260942.1123.9298054.130701.194905.085404.04870HepG2UCHL5
CAPN10-AS1ENSG00000260942.1152.5338083.902700.862202.594401.62360HepG2UPF2
CAPN10-AS1ENSG00000260942.1154.3353092.561900.737503.107602.47920HepG2UTP3
CAPN10-AS1ENSG00000260942.1170.7018090.207300.920103.358502.56420HepG2XRN2
CAPN10-AS1ENSG00000260942.1604.49490263.708301.1967014.1043012.92330K562AQR
CAPN10-AS1ENSG00000260942.1112.0568063.530700.818602.521201.77120K562CPSF6
CAPN10-AS1ENSG00000260942.194.37890164.84150-0.804503.896803.14240K562DDX47
CAPN10-AS1ENSG00000260942.1194.35890126.105100.624003.137701.72100K562DDX6
CAPN10-AS1ENSG00000260942.140.2566089.70690-1.156002.622201.64640K562EIF3A
CAPN10-AS1ENSG00000260942.1300.42630175.464500.775705.724804.42800K562HNRNPU
CAPN10-AS1ENSG00000260942.1196.35430125.280500.648203.188702.32050K562MTPAP
CAPN10-AS1ENSG00000260942.1195.03670139.175900.486702.161201.49340K562NSUN2
CAPN10-AS1ENSG00000260942.1174.4705099.682900.807503.709701.96680K562NUSAP1
CAPN10-AS1ENSG00000260942.1166.9715098.845000.756302.874601.42020K562PHF6
CAPN10-AS1ENSG00000260942.1284.63480173.624100.713004.123102.16430K562PKM
CAPN10-AS1ENSG00000260942.1175.9556090.775800.954704.705903.48330K562PSIP1
CAPN10-AS1ENSG00000260942.191.04450140.44310-0.625302.362101.74100K562PTBP1
CAPN10-AS1ENSG00000260942.1217.73370294.80740-0.437202.086201.37740K562PUF60
CAPN10-AS1ENSG00000260942.163.51820123.15860-0.955303.223702.34100K562RPS19
CAPN10-AS1ENSG00000260942.1221.81710127.413000.799802.388101.30500K562SF1
CAPN10-AS1ENSG00000260942.1263.50130146.289700.848902.793101.55800K562SNRNP200
CAPN10-AS1ENSG00000260942.1200.39710129.191700.633203.165501.90780K562SRSF7
CAPN10-AS1ENSG00000260942.1202.75330131.918500.620002.580501.53160K562TRA2A
CAPN10-AS1ENSG00000260942.1204.44110147.572900.470202.097301.46550K562UPF1
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for CAPN10-AS1 is not available on ENCORE database.






No RBPs affect the alternative splcing events of CAPN10-AS1 on ENCORE database.





The Knockdown/knockout RNA-Seq assay for CAPN10-AS1 is not avaliable on ENCORE database.