ATP6C

General Information

Gene Name       : ATP6C
Gene ID             :
Essential Gene : No

Functions

Localization

Domains (AlphaFold: ATP6C)


Antibody Validation


Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for ATP6C is not avaliable on ENCORE database.



Proteins bound to RNA

  • ATP6C RNA is bound by 53 proteins.  







eCLIP assay for ATP6C is not avaliable on ENCORE database.





53 proteins are bound to ATP6C RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr1625639652564028+5'-UTR,intron-Distal4.3630443.35622K562DDX3X
chr1625639712564018+5'-UTR,intron-Distal4.6624412.06014K562GEMIN5
chr1625639662564025+5'-UTR,intron-Distal4.6537558.60471HepG2DDX3X
chr1625640802564136+5'-UTR,CDS,intron-Distal,intron-Proximal3.6801622.73121K562DDX3X
chr1625640282564080+5'-UTR,intron-Distal3.6679728.37565K562DDX3X
chr1625640252564085+5'-UTR,intron-Distal3.2581733.82108HepG2DDX3X
chr1625639782564119+5'-UTR,CDS,intron-Distal3.2863912.63285HepG2PCBP1
chr1625640182564099+5'-UTR,intron-Distal3.5655223.56431K562GEMIN5
chr1625641632564223+CDS,intron-Distal,intron-Proximal4.925216.23935HepG2AQR
chr1625641462564176+CDS,intron-Distal,intron-Proximal3.098943.56007K562DDX6
chr1625709932571057+5'-UTR,CDS3.4775210.79740HepG2PPIG
chr1625777492577789+3'-UTR,CDS,intron-Distal,intron-Proximal3.805994.74496HepG2DDX59
chr1625779312577986+3'-UTR,CDS,intron-Distal,intron-Proximal4.4458410.14097HepG2PPIG
chr1625641472564179+CDS,intron-Distal,intron-Proximal3.9660410.88170HepG2RPS3
chr1625641302564179+CDS,intron-Distal,intron-Proximal3.5324910.55597K562GEMIN5
chr1625775912577622+3'-UTR,CDS,intron-Distal,intron-Proximal3.995408.19973HepG2EFTUD2
chr1625710122571066+5'-UTR,CDS3.247344.17442HepG2SRSF1
chr1625641382564194+CDS,intron-Distal,intron-Proximal3.295733.44337K562METAP2
chr1625641442564183+CDS,intron-Distal,intron-Proximal3.8993513.52596HepG2DDX3X
chr1625777202577795+3'-UTR,CDS,intron-Distal,intron-Proximal5.1119329.58630HepG2EFTUD2
chr1625709992571058+5'-UTR,CDS3.620676.88650HepG2GRWD1
chr1625777332577808+3'-UTR,CDS,intron-Distal,intron-Proximal4.067435.23469HepG2AQR
chr1625777952577841+3'-UTR,CDS,intron-Distal3.096224.68315HepG2EFTUD2
chr1625695672569596+3'-UTR,CDS,intron-Distal4.063399.96158K562SND1
chr1625645982564634+intron-Distal3.433453.77567K562NONO
chr1625672022567262+intron-Distal4.963696.16396K562NONO
chr1625698522569982+3'-UTR,intron-Distal4.4763318.99208HepG2UPF1
chr1625700232570093+3'-UTR,intron-Distal3.6082627.80900HepG2DDX55
chr1625650872565178+intron-Distal5.6238611.74831K562NONO
chr1625692502569372+3'-UTR,5'-UTR,CDS,intron-Distal3.5707914.03068HepG2DDX3X
chr1625701102570192+3'-UTR,intron-Distal5.2214725.92733HepG2UPF1
chr1625737862573869+intron-Distal4.331545.04359K562HNRNPK
chr1625675342567578+intron-Distal4.739165.91582K562NONO
chr1625646562564713+intron-Distal4.191398.45389K562CSTF2T
chr1625650502565172+intron-Distal3.820803.74713K562FUS
chr1625707402570806+CDS,intron-Distal,intron-Proximal4.751806.99120K562AQR
chr1625648192564927+intron-Distal4.518456.07385K562GTF2F1
chr1625649042564979+intron-Distal3.933824.99833K562AKAP8L
chr1625645792564628+intron-Distal3.730874.25110K562CSTF2T
chr1625686592568719+intron-Distal3.122293.59523HepG2SUGP2
chr1625698382569905+3'-UTR,intron-Distal4.78317400.00000K562PUM2
chr1625698702569985+3'-UTR,intron-Distal4.0164666.85811K562PABPC4
chr1625703902570471+5'-UTR,CDS,intron-Distal3.439858.12472HepG2CSTF2T
chr1625696812569752+3'-UTR,CDS,intron-Distal4.395415.60015HepG2IGF2BP3
chr1625673002567334+intron-Distal4.386894.72743K562NONO
chr1625698812569943+3'-UTR,intron-Distal5.3217719.72037HepG2PCBP1
chr1625694362569498+intron-Distal,intron-Proximal4.626926.01148HepG2EFTUD2
chr1625648792565001+intron-Distal3.867466.63019HepG2GTF2F1
chr1625648632564975+intron-Distal3.891234.11145K562FUS
chr1625654462565504+intron-Distal3.299935.23529K562EWSR1
chr1625697832569838+3'-UTR,intron-Distal3.2679532.19165K562PUM2
chr1625696262569633+3'-UTR,CDS,intron-Distal3.450295.22400HepG2DDX3X
chr1625701232570137+3'-UTR,intron-Distal3.0336518.28759K562YBX3
chr1625684992568564+intron-Distal4.803436.87697K562NONO
chr1625743382574406+intron-Distal4.1468910.63674HepG2MATR3
chr1625692182569239+3'-UTR,5'-UTR,CDS,intron-Distal,intron-Proximal4.267785.96402HepG2RPS3
chr1625686692568721+intron-Distal3.004393.32365K562RBFOX2
chr1625700192570096+3'-UTR,intron-Distal4.1800111.87431HepG2TIAL1
chr1625654602565515+intron-Distal3.731578.39797K562CSTF2T
chr1625694852569557+3'-UTR,CDS,intron-Distal,intron-Proximal4.5404516.56288K562SF3B4
chr1625648692564960+intron-Distal4.285134.35952HepG2PRPF4
chr1625697882569844+3'-UTR,intron-Distal3.0215210.34457HepG2DDX55
chr1625651392565172+intron-Distal3.914773.54208HepG2SUGP2
chr1625651872565236+intron-Distal3.882435.37486K562NONO
chr1625671372567165+intron-Distal4.074093.53896K562NONO
chr1625648522564921+intron-Distal6.0739019.07834K562CSTF2T
chr1625708212570866+CDS,intron-Distal3.090204.63108HepG2PPIG
chr1625697462569842+3'-UTR,intron-Distal3.330407.45099K562APOBEC3C
chr1625737762573858+intron-Distal4.806386.57498HepG2PCBP2
chr1625701712570196+3'-UTR,intron-Distal3.9582113.67974K562PABPC4
chr1625648542564921+intron-Distal4.168616.75450K562NONO
chr1625701002570185+3'-UTR,intron-Distal4.0928961.92201HepG2LARP4
chr1625765132576573+intron-Distal3.904803.65412HepG2HNRNPK
chr1625760772576213+intron-Distal4.697766.48506K562MATR3
chr1625655322565586+intron-Distal3.061823.18966K562MATR3
chr1625695442569569+3'-UTR,CDS,intron-Distal3.3289614.48668HepG2SND1
chr1625700962570106+3'-UTR,intron-Distal3.2106718.18355K562YBX3
chr1625764152576513+intron-Distal4.365804.36307HepG2HNRNPK
chr1625742702574407+intron-Distal4.303594.78196HepG2PTBP1
chr1625690092569089+5'-UTR,intron-Distal4.861526.16396K562NONO
chr1625686772568750+intron-Distal4.547175.00384HepG2SFPQ
chr1625677312567803+intron-Distal4.533895.97091K562TARDBP
chr1625686472568750+intron-Distal3.881163.97747K562FUS
chr1625706972570746+intron-Distal,intron-Proximal3.315226.93483HepG2PRPF8
chr1625705082570538+5'-UTR,CDS,intron-Distal3.156643.03570HepG2NCBP2
chr1625697362569794+3'-UTR,CDS,intron-Distal4.4416916.64512K562IGF2BP2
chr1625743462574414+intron-Distal3.108508.33053HepG2SUGP2
chr1625685642568615+intron-Distal3.199735.17701K562NONO
chr1625698692569943+3'-UTR,intron-Distal3.1852319.14845K562PCBP1
chr1625698492569950+3'-UTR,intron-Distal3.0720932.04872HepG2DDX55
chr1625696802569721+3'-UTR,CDS,intron-Distal3.284318.28327HepG2LARP4
chr1625701002570193+3'-UTR,intron-Distal3.2678112.49093HepG2AKAP1
chr1625648242564912+intron-Distal4.423608.56193HepG2FAM120A
chr1625737712573871+intron-Distal3.954516.58508HepG2DDX59
chr1625645172564580+intron-Distal4.902694.57154HepG2FAM120A
chr1625700132570089+3'-UTR,intron-Distal4.501966.41483HepG2SUB1
chr1625681362568227+intron-Distal3.8557810.13809K562CSTF2T
chr1625748622574917+intron-Distal3.516544.08528HepG2SUGP2
chr1625700662570096+3'-UTR,intron-Distal3.9707825.77381K562YBX3
chr1625707682570842+CDS,intron-Distal,intron-Proximal3.491063.16951HepG2SRSF9
chr1625654362565516+intron-Distal5.5283610.23711K562NONO
chr1625699462569985+3'-UTR,intron-Distal3.9638417.99418K562YBX3
chr1625707052570799+CDS,intron-Distal,intron-Proximal5.442176.83278K562PRPF8
chr1625647892564836+intron-Distal3.436784.71513K562NONO
chr1625645302564597+intron-Distal4.691384.95161K562GTF2F1
chr1625649342564980+intron-Distal4.187493.67527K562SMNDC1
chr1625701082570195+3'-UTR,intron-Distal4.168957.83352K562METAP2
chr1625645272564574+intron-Distal4.629614.72743K562NONO
chr1625643402564443+5'-UTR,intron-Distal,intron-Proximal3.010143.34798HepG2PRPF4
chr1625761752576217+intron-Distal3.576484.36087HepG2MATR3
chr1625700222570065+3'-UTR,intron-Distal4.025168.71867HepG2YBX3
chr1625651922565244+intron-Distal3.355784.38238K562CSTF2T
chr1625707672570813+CDS,intron-Distal,intron-Proximal3.059013.01245K562SRSF1
chr1625693192569370+CDS,intron-Distal4.6836420.46052HepG2RPS3
chr1625648182564926+intron-Distal5.0000316.83400HepG2CSTF2T
chr1625701202570191+3'-UTR,intron-Distal3.4259612.48648HepG2SUB1
chr1625674802567591+intron-Distal3.299156.44040K562CSTF2T
chr1625667732566843+intron-Distal3.740604.78995K562MATR3
chr1625651372565180+intron-Distal5.017059.08542K562CSTF2T
chr1625683962568437+intron-Distal3.510204.71513K562NONO
chr1625696282569643+3'-UTR,CDS,intron-Distal4.385219.74340HepG2LARP4
chr1625646922564735+intron-Distal4.3197910.15405HepG2CSTF2T
chr1625701102570200+3'-UTR,intron-Distal3.0041911.60534K562UPF1
chr1625686642568714+intron-Distal3.819795.56645HepG2CSTF2T
chr1625701032570171+3'-UTR,intron-Distal3.5037141.40501K562PABPC4
chr1625691822569247+3'-UTR,5'-UTR,CDS,intron-Distal,intron-Proximal3.867475.30069HepG2AQR
chr1625742362574346+intron-Distal4.419574.18579K562MATR3
chr1625700662570199+3'-UTR,intron-Distal3.1503414.74278K562DDX6
chr1625686572568767+intron-Distal4.547507.24988K562NONO
chr1625700352570066+3'-UTR,intron-Distal3.8439228.72189K562YBX3
chr1625700932570192+3'-UTR,intron-Distal4.1803429.06420HepG2DDX6
chr1625645162564614+intron-Distal4.6952512.01841K562EWSR1
chr1625650692565118+intron-Distal3.683444.44706K562EIF4G2
chr1625707282570750+intron-Distal,intron-Proximal3.893933.25631HepG2PRPF4
chr1625646582564740+intron-Distal4.298478.71496K562EWSR1
chr1625645192564560+intron-Distal4.950213.75440HepG2XRN2
chr1625697012569723+3'-UTR,CDS,intron-Distal3.635935.37198HepG2IGF2BP1
chr1625645262564579+intron-Distal5.107157.20000K562CSTF2T
chr1625700252570100+3'-UTR,intron-Distal3.173967.88154HepG2AKAP1
chr1625706892570757+intron-Distal,intron-Proximal5.6808913.74793HepG2FAM120A
chr1625653232565384+intron-Distal3.542735.41408K562NONO
chr1625683172568357+intron-Distal3.484994.25264K562NONO
chr1625696622569672+3'-UTR,CDS,intron-Distal3.456806.82132K562YBX3
chr1625661152566177+intron-Distal3.617033.98203K562MATR3
chr1625700542570073+3'-UTR,intron-Distal3.2010515.30263K562IGF2BP2
chr1625645222564580+intron-Distal3.008764.63410HepG2SUGP2
chr1625701112570182+3'-UTR,intron-Distal4.0410715.42749K562PCBP1
chr1625700732570112+3'-UTR,intron-Distal3.1911616.62171K562IGF2BP2
chr1625700382570099+3'-UTR,intron-Distal3.3664729.36328K562PABPC4
chr1625650752565137+intron-Distal4.1537113.40624K562CSTF2T
chr1625696802569778+3'-UTR,CDS,intron-Distal3.4428410.18603HepG2PCBP2
chr1625697952569861+3'-UTR,intron-Distal3.5537225.89815K562PABPC4
chr1625700322570100+3'-UTR,intron-Distal4.5105347.30910HepG2LARP4
chr1625701062570123+3'-UTR,intron-Distal3.3468920.75323K562YBX3
chr1625700952570183+3'-UTR,intron-Distal3.5757453.68096HepG2DDX55
chr1625696772569734+3'-UTR,CDS,intron-Distal4.4797017.65045HepG2SND1
chr1625697072569736+3'-UTR,CDS,intron-Distal3.143508.09909K562IGF2BP2
chr1625695412569567+3'-UTR,CDS,intron-Distal,intron-Proximal3.958669.96158K562SND1
chr1625691862569229+3'-UTR,5'-UTR,CDS,intron-Distal,intron-Proximal3.271233.14365K562NONO
chr1625704052570461+5'-UTR,CDS,intron-Distal3.354796.83419HepG2NCBP2
chr1625702652570346+intron-Distal5.456159.74347HepG2CSTF2T
chr1625695822569655+3'-UTR,CDS,intron-Distal4.0929420.38567HepG2RPS3
chr1625707122570779+CDS,intron-Distal,intron-Proximal3.468786.39733HepG2AQR
chr1625695432569582+3'-UTR,CDS,intron-Distal3.7266810.25087HepG2RPS3
chr1625708232570870+CDS,intron-Distal3.020663.52281HepG2GRWD1
chr1625695692569595+3'-UTR,CDS,intron-Distal3.8947418.72841HepG2SND1
chr1625700232570110+3'-UTR,intron-Distal6.1121819.26644HepG2UPF1
chr1625772222577340+intron-Distal,intron-Proximal3.452544.61945HepG2HNRNPK
chr1625743462574412+intron-Distal4.436833.90241K562MATR3
chr1625691992569250+3'-UTR,5'-UTR,CDS,intron-Distal,intron-Proximal3.204124.83230K562AQR
chr1625697272569776+3'-UTR,CDS,intron-Distal3.529426.60130HepG2IGF2BP1
chr1625692172569250+3'-UTR,5'-UTR,CDS,intron-Distal,intron-Proximal3.844295.67297HepG2DDX3X
chr1625683062568363+intron-Distal4.854196.58779K562EWSR1
chr1625645912564644+intron-Distal3.879353.86417HepG2PRPF4
chr1625645242564660+intron-Distal3.8672615.67677HepG2CSTF2T
chr1625649232565000+intron-Distal3.494283.53867K562TBRG4
chr1625683052568374+intron-Distal5.111798.59041K562CSTF2T
chr1625677432567772+intron-Distal4.149044.27402K562CSTF2T
chr1625647892564852+intron-Distal5.6618114.36875K562CSTF2T
chr1625645422564616+intron-Distal3.619476.00776K562PRPF8
chr1625695952569663+3'-UTR,CDS,intron-Distal4.4752435.41044HepG2SND1
chr1625707692570829+CDS,intron-Distal,intron-Proximal3.424666.49144HepG2SRSF1
chr1625645272564612+intron-Distal5.059595.90351K562AKAP8L
chr1625686572568743+intron-Distal3.491298.57817K562CSTF2T
chr1625700512570113+3'-UTR,intron-Distal4.6466612.80367HepG2IGF2BP3
chr1625699432569946+3'-UTR,intron-Distal3.8152313.54289K562YBX3
chr1625674632567534+intron-Distal3.750258.12417K562NONO
chr1625689572569014+5'-UTR,intron-Distal3.458564.84557HepG2CSTF2T
chr1625692642569311+3'-UTR,5'-UTR,CDS,intron-Distal4.0651515.86003HepG2RPS3
chr1625697792569838+3'-UTR,intron-Distal3.3397018.79697HepG2LARP4
chr1625697212569759+3'-UTR,CDS,intron-Distal3.2124110.73544HepG2LARP4
chr1625700192570103+3'-UTR,intron-Distal4.6912810.40405HepG2TIA1
chr1625683222568368+intron-Distal4.572506.19429HepG2CSTF2T
chr1625733632573446+intron-Distal3.137166.34497HepG2SUGP2
chr1625698662569958+3'-UTR,intron-Distal3.9303036.90330HepG2LARP4
chr1625653392565384+intron-Distal3.049163.79911HepG2CSTF2T
chr1625649152565006+intron-Distal3.8612411.62006K562EWSR1
chr1625702942570316+intron-Distal3.901393.37414K562CSTF2T
chr1625737722573880+intron-Distal4.385809.64897HepG2HNRNPK
chr1625706982570761+intron-Distal,intron-Proximal4.734836.70034HepG2CSTF2T
chr1625762492576339+intron-Distal3.208004.53328HepG2MATR3
chr1625649382564981+intron-Distal4.010738.06348HepG2CSTF2T
chr1625695962569670+3'-UTR,CDS,intron-Distal3.4884714.48104K562SND1
chr1625738032573848+intron-Distal4.738756.08205HepG2MATR3
chr1625681242568210+intron-Distal5.142846.40665K562NONO
chr1625645742564635+intron-Distal4.099535.94541K562TIA1
chr1625700512570140+3'-UTR,intron-Distal3.1095815.81593K562IGF2BP1
chr1625694882569533+intron-Distal,intron-Proximal4.905566.39664HepG2SF3B4
chr1625700432570101+3'-UTR,intron-Distal3.3252016.08760K562PUM2
chr1625649212565057+intron-Distal4.4913520.62269K562CSTF2T
chr1625649212565010+intron-Distal4.7938711.49313K562NONO
chr1625649332564985+intron-Distal3.796195.44474HepG2FAM120A
chr1625662972566335+intron-Distal4.083643.07008K562NONO
chr1625645232564574+intron-Distal3.389774.34719K562TIA1
chr1625697782569828+3'-UTR,intron-Distal3.032393.70975K562UCHL5
chr1625699052569939+3'-UTR,intron-Distal3.3409126.28169K562PUM2
chr1625642052564269+intron-Distal,intron-Proximal3.197235.98485K562CSTF2T
chr1625642132564256+intron-Distal,intron-Proximal3.859703.03048HepG2GTF2F1
chr1625776472577708+intron-Distal,intron-Proximal5.6966918.00309HepG2EFTUD2
chr1625641992564273+intron-Distal,intron-Proximal3.649038.40269K562EWSR1
chr1625642112564267+intron-Distal,intron-Proximal5.076836.16396K562NONO
chr1625709012570941+CDS,intron-Proximal4.4987310.26986HepG2PRPF8
chr1625642042564250+intron-Distal,intron-Proximal4.4161111.69745K562AQR
chr1625777422577770+intron-Distal,intron-Proximal4.454269.43690HepG2BUD13
chr1625774962577504+intron-Distal,intron-Proximal4.593606.67793HepG2EFTUD2
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for ATP6C is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for ATP6C is not available on ENCORE database.

  • No RBPs affect the gene expression of ATP6C on ENCORE database.


The Knockdown/knockout RNA-Seq assay for ATP6C is not available on ENCORE database.






No RBPs affect the gene expression of ATP6C on ENCORE database.






The Knockdown/knockout RNA-Seq assay for ATP6C is not available on ENCORE database.






No RBPs affect the alternative splcing events of ATP6C on ENCORE database.





The Knockdown/knockout RNA-Seq assay for ATP6C is not avaliable on ENCORE database.