RBP | Antibody Info | Primary-HepG2 | Secondary-HepG2 | Primary-K562 | Secondary-K562 | Primary-UBERON | Primary-Hela |
---|
Chr | Start | End | Strand | Matched Area | log2(fold change) | -log(p-value) | Cell Line | Binding Protein Name |
---|---|---|---|---|---|---|---|---|
chr19 | 34718710 | 34718809 | + | 3'-UTR | 6.76965 | 66.88458 | K562 | TARDBP |
chr19 | 34719994 | 34720133 | + | 3'-UTR | 4.21546 | 51.02426 | K562 | PUM2 |
chr19 | 34710658 | 34710755 | + | CDS | 6.01679 | 44.97004 | HepG2 | BCLAF1 |
chr19 | 34663413 | 34663499 | + | 5'-UTR | 4.65691 | 44.35733 | HepG2 | DDX3X |
chr19 | 34663441 | 34663585 | + | 5'-UTR,CDS | 3.86416 | 25.08044 | K562 | GEMIN5 |
chr19 | 34710609 | 34710658 | + | CDS,intron-Proximal | 4.86689 | 24.48745 | HepG2 | BCLAF1 |
chr19 | 34710755 | 34710783 | + | CDS,intron-Proximal | 4.98952 | 22.88455 | HepG2 | BCLAF1 |
chr19 | 34718719 | 34718824 | + | 3'-UTR | 3.95265 | 21.71813 | K562 | EIF4G2 |
chr19 | 34682391 | 34682485 | + | intron-Distal | 4.52637 | 20.71264 | HepG2 | PTBP1 |
chr19 | 34687058 | 34687158 | + | intron-Distal | 4.56173 | 19.02888 | K562 | KHSRP |
Chr | Start | End | Strand | Matched Area | log2(fold change) | -log(p-value) | Cell Line | Binding Protein Name |
Gene Name | Gene ID | KDMean | CNMean | log2(fold change) * | -log(pval) ** | -log(padj) ** | Cell Line | Affected by RBP | Bound by RBP |
---|---|---|---|---|---|---|---|---|---|
LSM14A | ENSG00000257103.4 | 1100.16250 | 2870.52880 | -1.38360 | 74.39660 | 71.98840 | HepG2 | UTP3 | |
LSM14A | ENSG00000257103.4 | 1241.53750 | 3117.07790 | -1.32810 | 41.34820 | 38.86280 | HepG2 | MSI2 | |
LSM14A | ENSG00000257103.4 | 985.75960 | 3032.87950 | -1.62140 | 38.19730 | 36.13880 | HepG2 | GPKOW | |
LSM14A | ENSG00000257103.4 | 1430.36680 | 3120.58950 | -1.12540 | 36.77990 | 35.33810 | HepG2 | TIAL1 | |
LSM14A | ENSG00000257103.4 | 1908.40870 | 3105.45110 | -0.70240 | 27.81700 | 26.20250 | HepG2 | CKAP4 | |
LSM14A | ENSG00000257103.4 | 1877.71680 | 3211.70070 | -0.77440 | 27.65770 | 25.90840 | HepG2 | HNRNPU | |
LSM14A | ENSG00000257103.4 | 2256.31750 | 3858.13900 | -0.77390 | 26.70060 | 25.34100 | HepG2 | PTBP1 | |
LSM14A | ENSG00000257103.4 | 2897.04540 | 4527.24580 | -0.64410 | 26.63510 | 25.02970 | HepG2 | SUCLG1 | |
LSM14A | ENSG00000257103.4 | 2346.16580 | 3791.48250 | -0.69250 | 22.74820 | 21.28690 | HepG2 | PCBP1 | |
LSM14A | ENSG00000257103.4 | 1092.29530 | 2582.44290 | -1.24140 | 22.71540 | 21.02500 | HepG2 | DDX21 | |
Gene Name | Gene ID | KDMean | CNMean | log2(fold change) | -log(pval) | -log(padj) | Cell Line | Affected by RBP | Bound by RBP |
*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".
Event Type | Gene Name | Gene ID | chr | Strand | ExonStart | ExonEnd | 2ndExonStart | 2ndExonEnd | upstreamES | upstreamEE | downstreamES | downstreamEE | dPSI | p-value | FDR | is_included | Cell Line | Affected by RBP | Bound by RBP |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
SE | LSM14A | ENSG00000257103.4 | chr19 | + | 34717312 | 34717369 | 34712411 | 34712643 | 34718269 | 34719001 | -0.24300 | 0.00000 | 0.00000 | excluded | K562 | SRSF1 | |||
SE | LSM14A | ENSG00000257103.4 | chr19 | + | 34706028 | 34706205 | 34699833 | 34699956 | 34706500 | 34706566 | -0.40900 | 0.00000 | 0.00000 | excluded | K562 | SRSF1 | |||
SE | LSM14A | ENSG00000257103.4 | chr19 | + | 34706028 | 34706205 | 34699833 | 34699956 | 34706500 | 34706566 | -0.11100 | 0.00000 | 0.00001 | excluded | K562 | SF3B4 | |||
SE | LSM14A | ENSG00000257103.4 | chr19 | + | 34706028 | 34706205 | 34699833 | 34699956 | 34706500 | 34706566 | -0.24600 | 0.00000 | 0.00000 | excluded | K562 | PRPF8 | |||
SE | LSM14A | ENSG00000257103.4 | chr19 | + | 34706028 | 34706205 | 34699833 | 34699956 | 34706500 | 34706566 | -0.20800 | 0.00000 | 0.00000 | excluded | HepG2 | U2AF1 | |||
SE | LSM14A | ENSG00000257103.4 | chr19 | + | 34717312 | 34717369 | 34712411 | 34712643 | 34718269 | 34719001 | 0.23400 | 0.00000 | 0.00030 | included | HepG2 | ILF3 | |||
SE | LSM14A | ENSG00000257103.4 | chr19 | + | 34706028 | 34706205 | 34699833 | 34699956 | 34706500 | 34706566 | -0.22000 | 0.00000 | 0.00000 | excluded | HepG2 | U2AF2 | |||
SE | LSM14A | ENSG00000257103.4 | chr19 | + | 34710295 | 34710478 | 34706500 | 34706566 | 34710610 | 34710782 | -0.06800 | 0.00000 | 0.00012 | excluded | HepG2 | U2AF2 | |||
SE | LSM14A | ENSG00000257103.4 | chr19 | + | 34706028 | 34706205 | 34699833 | 34699956 | 34706500 | 34706566 | -0.12000 | 0.00000 | 0.00000 | excluded | K562 | AQR | |||
SE | LSM14A | ENSG00000257103.4 | chr19 | + | 34706028 | 34706205 | 34699833 | 34699956 | 34706500 | 34706566 | -0.09200 | 0.00000 | 0.00032 | excluded | K562 | FXR1 |
*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".