BRD4

General Information

Gene Name       : BRD4
Gene ID             : ENSG00000141867.17
Essential Gene : No

Functions

Localization

Domains (AlphaFold: BRD4)


Antibody Validation

View validation images for all BRD4 antibodies

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878BRD4ENSG00000141867.177.6515.6011.62ENCSR000AEF
HepG2BRD4ENSG00000141867.1724.1516.3820.27ENCSR985KAT
K562BRD4ENSG00000141867.1731.3523.7527.55ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  
  GeneName    Antibody_DCC_ID    Product_ID    Lot_ID    Phosphate    HepG2 Primary Validation    K562 Primary Validation    HepG2 Secondary Validation    K562 Secondary Validation  
BRD413440S9Submitted, ENCORE2BGKcLV42-11, Submitting, ENCORE2
BRD483375S1Submitted, ENCORE2


  KD RNA-Seq  
  GeneName    Cell_Line    Method    Exp_ID    Control_ID    Sample_reps    Control_reps    KD%    Status    Project    Note  
BRD4K562CRISPRBRD4-BGKcLV42-11,BRD4-BGKcLV42-12NT-BGKcLV42-1,NT-BGKcLV42-286.8,72.0SequencedENCORE2
BRD4HepG2CRISPRBRD4-BGHcLV43-7,BRD4-BGHcLV43-8NT-BGHcLV43-1,NT-BGHcLV43-289.7,86.2SequencedENCORE2


  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela
BRD4Product_ID: 13440S
Lot_ID: 9
Source: Cell Signaling Technology
Target Name: BRD4-human
CST_13440S_9_BRD4.png<br>Caption: IP-WB analysis of 13440S whole cell lysate using the BRD4 specific antibody, 13440S. Lanes 1 and 2 are 2.5% of five million whole cell lysate input and 50% of IP enrichment, respectively, using a normal IgG antibody. Lane 3 is 50% of IP enrichment from five million whole cell lysate using the BRD4-specific antibody, 13440S. The same antibody was used to detect protein levels via Western blot. This antibody passes preliminary validation and will be further pursued for secondary validation. *NOTE* Protein sizes are taken from Genecards.org and are only estimates based on sequence. Actual protein size may differ based on protein characteristics and electrophoresis method used.
BRD4-K562-CRISPR-13440S.png<br>Caption: Western blot following CRISPR against BRD4 in K562 whole cell lysate using BRD4 specific antibody. Lane 1 is a ladder, lane 2 is K562 non-targeting control knockdown, lane 3 and 4 are two different CRISPR against BRD4. BRD4 protein appears as the green arrow, Beta-actin serves as a control and appears in red arrow.
BRD4Product_ID: 83375S
Lot_ID: 1
Source: Cell Signaling Technology
Target Name: BRD4-human
CST_83375S_1_BRD4.png<br>Caption: IP-WB analysis of 83375S whole cell lysate using the BRD4 specific antibody, 83375S. Lanes 1 and 2 are 2.5% of five million whole cell lysate input and 50% of IP enrichment, respectively, using a normal IgG antibody. Lane 3 is 50% of IP enrichment from five million whole cell lysate using the BRD4-specific antibody, 83375S. The same antibody was used to detect protein levels via Western blot. This antibody passes preliminary validation and will be further pursued for secondary validation. *NOTE* Protein sizes are taken from Genecards.org and are only estimates based on sequence. Actual protein size may differ based on protein characteristics and electrophoresis method used.








RNA Targets

  • eCLIP assay for BRD4 is not avaliable on ENCORE database.



Proteins bound to RNA

  • BRD4 RNA is bound by 70 proteins.  







eCLIP assay for BRD4 is not avaliable on ENCORE database.





70 proteins are bound to BRD4 RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr191534916315349190-3'-UTR,intron-Distal3.917833.05875K562RBM15
chr191534817115348205-3'-UTR,intron-Distal4.762529.18768K562PABPC4
chr191534777415347821-3'-UTR,intron-Distal3.0605917.24236K562PABPC4
chr191534871115348795-3'-UTR,intron-Distal4.3991824.32144HepG2UPF1
chr191534787515347972-3'-UTR,intron-Distal4.38886400.00000K562UPF1
chr191538392215383945-3'-UTR,5'-UTR,intron-Distal,intron-Proximal3.948925.36918HepG2ZNF800
chr191534906815349133-3'-UTR,intron-Distal3.099814.74431HepG2LARP4
chr191537641915376441-3'-UTR,CDS,intron-Distal,intron-Proximal3.320097.21479K562UCHL5
chr191534907215349135-3'-UTR,intron-Distal4.979525.85529K562RBM15
chr191535959115359702-3'-UTR,intron-Distal5.0905325.98943K562UPF1
chr191537825215378292-3'-UTR,CDS,intron-Distal,intron-Proximal4.994048.78094HepG2GRWD1
chr191534906215349127-3'-UTR,intron-Distal3.535473.12654K562SLTM
chr191534834815348399-3'-UTR,intron-Distal3.358665.97918HepG2UPF1
chr191537833715378362-3'-UTR,CDS,intron-Distal4.032337.44026K562YBX3
chr191534775615347822-3'-UTR,intron-Distal3.718616.59901K562AKAP1
chr191537834015378415-3'-UTR,CDS,intron-Distal,intron-Proximal3.143743.80333HepG2AQR
chr191537822915378244-3'-UTR,CDS,intron-Distal,intron-Proximal3.597814.65365HepG2GRWD1
chr191534834215348395-3'-UTR,intron-Distal4.204508.00683HepG2TIA1
chr191534904215349125-3'-UTR,intron-Distal4.842314.88132HepG2RBM15
chr191538386215383938-3'-UTR,5'-UTR,CDS,intron-Distal,intron-Proximal3.2346310.08870HepG2PPIG
chr191534828415348338-3'-UTR,intron-Distal3.8170425.96730K562UPF1
chr191534902315349134-3'-UTR,intron-Distal5.6032121.86312HepG2UPF1
chr191534875515348784-3'-UTR,intron-Distal4.138223.74262HepG2LARP4
chr191534867815348704-3'-UTR,intron-Distal4.0772211.58326K562UPF1
chr191534904915349126-3'-UTR,intron-Distal5.146139.16846HepG2AKAP1
chr191538384915383945-3'-UTR,5'-UTR,CDS,intron-Distal,intron-Proximal3.405594.11570HepG2AGGF1
chr191534776015347822-3'-UTR,intron-Distal3.1263537.21846K562UPF1
chr191537644115376454-3'-UTR,CDS,intron-Distal3.275546.92192K562UCHL5
chr191534821715348250-3'-UTR,intron-Distal5.3076515.83369K562UPF1
chr191534777615347822-3'-UTR,intron-Distal3.2486417.91973K562FAM120A
chr191535922215359318-3'-UTR,intron-Distal4.723375.35992HepG2UPF1
chr191538386715383922-3'-UTR,5'-UTR,CDS,intron-Distal,intron-Proximal4.228647.53418HepG2ZNF800
chr191535959915359685-3'-UTR,intron-Distal4.329964.92727HepG2AKAP1
chr191538385915383948-3'-UTR,5'-UTR,CDS,intron-Distal,intron-Proximal3.2510016.60762HepG2BUD13
chr191534865815348720-3'-UTR,intron-Distal5.058317.76785HepG2AKAP1
chr191534798915348028-3'-UTR,intron-Distal3.5904414.20729K562UPF1
chr191537834315378419-3'-UTR,CDS,intron-Distal,intron-Proximal4.4115719.73653K562SF3B4
chr191534887815348919-3'-UTR,intron-Distal3.360573.85853K562IGF2BP2
chr191534867015348711-3'-UTR,intron-Distal5.9727916.32102HepG2UPF1
chr191534833815348396-3'-UTR,intron-Distal3.6333060.81520K562UPF1
chr191535961515359664-3'-UTR,intron-Distal3.387684.45619HepG2UPF1
chr191536383115363875-3'-UTR,intron-Distal3.133665.01757HepG2RBFOX2
chr191534872015348806-3'-UTR,intron-Distal3.778759.95056HepG2AKAP1
chr191534822315348337-3'-UTR,intron-Distal3.7449843.69210K562PUM2
chr191534790515347971-3'-UTR,intron-Distal3.2949434.94135K562FAM120A
chr191537638415376455-3'-UTR,CDS,intron-Distal,intron-Proximal3.554657.67473K562ZNF800
chr191538385415383942-3'-UTR,5'-UTR,CDS,intron-Distal,intron-Proximal3.6753521.35655K562ZNF622
chr191534813015348171-3'-UTR,intron-Distal5.5461261.11642K562PABPC4
chr191534797515348046-3'-UTR,intron-Distal3.578343.06310K562HNRNPC
chr191535931815359373-3'-UTR,intron-Distal4.421244.49605HepG2UPF1
chr191534772315347770-3'-UTR,intron-Distal3.8870010.75863K562TIA1
chr191534786115347905-3'-UTR,intron-Distal3.424696.43213K562FAM120A
chr191534833115348391-3'-UTR,intron-Distal4.5313342.43059K562TIA1
chr191535961515359665-3'-UTR,intron-Distal3.826124.04556K562AKAP1
chr191534788915347976-3'-UTR,intron-Distal5.1253131.40928HepG2UPF1
chr191534830415348344-3'-UTR,intron-Distal3.327223.03291HepG2AKAP1
chr191534906115349111-3'-UTR,intron-Distal6.8895125.35694K562UPF1
chr191537822615378301-3'-UTR,CDS,intron-Distal,intron-Proximal3.2377412.93991K562UCHL5
chr191534903115349127-3'-UTR,intron-Distal3.523616.69263K562FXR2
chr191534834615348392-3'-UTR,intron-Distal3.120646.22698K562U2AF1
chr191534851615348555-3'-UTR,intron-Distal5.143638.87118HepG2UPF1
chr191544310015443150-5'-UTR,intron-Distal3.9392710.17572K562NONO
chr191544309215443165-5'-UTR,intron-Distal3.3318815.17509K562GEMIN5
chr191544257615442699-5'-UTR,intron-Distal3.408843.59592K562XRN2
chr191544311115443225-5'-UTR,intron-Distal3.0983717.37211K562PUM1
chr191544261715442705-5'-UTR,intron-Distal3.7706716.16369K562CSTF2T
chr191544265315442700-5'-UTR,intron-Distal4.209375.00975K562FASTKD2
chr191544271115442761-5'-UTR,intron-Distal,intron-Proximal4.753374.98766K562EWSR1
chr191544269215442750-5'-UTR,intron-Distal,intron-Proximal3.926194.86325K562DDX6
chr191544271315442754-5'-UTR,intron-Distal,intron-Proximal5.4556412.49946K562NONO
chr191544265715442694-5'-UTR,intron-Distal4.461683.64448K562NCBP2
chr191544270515442760-5'-UTR,intron-Distal,intron-Proximal3.4654011.90602K562CSTF2T
chr191544263915442702-5'-UTR,intron-Distal3.028029.40912HepG2NKRF
chr191544265215442691-5'-UTR,intron-Distal3.294407.73390K562DROSHA
chr191544271715442756-5'-UTR,intron-Distal,intron-Proximal4.726575.54520K562GTF2F1
chr191544263715442695-5'-UTR,intron-Distal3.685078.09998K562AKAP8L
chr191544265515442694-5'-UTR,intron-Distal3.962895.61877K562NONO
chr191544263615442700-5'-UTR,intron-Distal3.583464.63906HepG2NCBP2
chr191544264315442692-5'-UTR,intron-Distal3.443273.94177HepG2FASTKD2
chr191544271215442761-5'-UTR,intron-Distal,intron-Proximal4.0339011.36666K562DROSHA
chr191544309615443162-5'-UTR,intron-Distal3.525109.70597HepG2FAM120A
chr191544271315442759-5'-UTR,intron-Distal,intron-Proximal4.2012910.51564K562GEMIN5
chr191544261115442705-5'-UTR,intron-Distal3.485678.10576HepG2PRPF4
chr191544308815443164-5'-UTR,intron-Distal3.4953713.71070K562CSTF2T
chr191544265515442693-5'-UTR,intron-Distal3.934843.06143HepG2IGF2BP1
chr191544264215442692-5'-UTR,intron-Distal3.382463.98034K562DDX6
chr191544263515442705-5'-UTR,intron-Distal5.0338421.78777HepG2CSTF2T
chr191544310115443162-5'-UTR,intron-Distal4.922677.27892K562EWSR1
chr191544325115443290-5'-UTR,intron-Distal,intron-Proximal4.019155.39661K562GEMIN5
chr191544320415443293-5'-UTR,intron-Distal,intron-Proximal3.9250523.18052HepG2DDX3X
chr191544271415442764-5'-UTR,intron-Distal,intron-Proximal4.755167.09127HepG2PRPF4
chr191544310615443141-5'-UTR,intron-Distal3.158336.19730K562ZNF622
chr191544265715442696-5'-UTR,intron-Distal3.849226.77655K562GEMIN5
chr191537521415375346-CDS,intron-Distal,intron-Proximal3.4792612.11621HepG2GRWD1
chr191534978215349835-CDS,intron-Distal,intron-Proximal4.360679.23607HepG2EFTUD2
chr191535508515355169-CDS,intron-Distal3.143327.59290HepG2GRWD1
chr191535370815353764-CDS,intron-Distal,intron-Proximal4.927638.73905HepG2IGF2BP3
chr191537422915374314-CDS,intron-Distal,intron-Proximal3.0107519.99983K562ZNF622
chr191535518615355220-CDS,intron-Distal3.114647.46708K562RBM15
chr191535079715350831-CDS,intron-Distal4.409216.20526HepG2DDX59
chr191536777815367831-CDS,intron-Distal3.344788.03770HepG2GRWD1
chr191535413215354269-CDS,intron-Distal3.6194023.22115K562PCBP1
chr191535511815355200-CDS,intron-Distal4.2983318.67342K562IGF2BP2
chr191536611815366136-CDS,intron-Distal3.270175.12345HepG2GRWD1
chr191535049415350567-CDS,intron-Distal4.640945.54754K562IGF2BP1
chr191535388315353919-CDS,intron-Distal5.066296.39896K562IGF2BP2
chr191534970415349783-CDS,intron-Distal,intron-Proximal4.4995017.99370K562ZNF622
chr191537543315375505-CDS,intron-Distal3.8709512.17063K562UCHL5
chr191536777415367829-CDS,intron-Distal,intron-Proximal3.953318.28260K562FXR2
chr191535522115355281-CDS,intron-Distal,intron-Proximal4.436736.08927HepG2IGF2BP3
chr191537634515376413-CDS,intron-Distal,intron-Proximal3.4181014.43042K562IGF2BP2
chr191534956115349591-CDS,intron-Distal3.302116.21602K562ZNF622
chr191536796815368041-CDS,intron-Distal,intron-Proximal3.173215.30729K562SMNDC1
chr191534923215349325-CDS,intron-Distal5.218576.38747HepG2AQR
chr191535424015354297-CDS,intron-Distal4.4240912.03040HepG2DDX59
chr191537554415375574-CDS,intron-Distal4.746096.78401HepG2GRWD1
chr191535553215355586-CDS,intron-Distal,intron-Proximal3.121546.89565HepG2AQR
chr191535379315353944-CDS,intron-Distal4.6615011.11968K562PCBP1
chr191537617615376222-CDS,intron-Distal4.366656.94519HepG2FXR2
chr191535404615354065-CDS,intron-Distal4.587324.17937HepG2PCBP2
chr191536687215366992-CDS,intron-Distal,intron-Proximal3.6486015.61588HepG2FXR2
chr191537535315375357-CDS,intron-Distal4.080633.42335K562FXR2
chr191535385715353931-CDS,intron-Distal3.279756.95862HepG2IGF2BP3
chr191535408415354250-CDS,intron-Distal3.5475624.61350HepG2HNRNPK
chr191536608615366109-CDS,intron-Distal,intron-Proximal3.185064.60947K562AQR
chr191536633515366404-CDS,intron-Distal,intron-Proximal4.7391022.72285K562UCHL5
chr191536687315366923-CDS,intron-Distal,intron-Proximal4.267566.26117K562MTPAP
chr191535518015355262-CDS,intron-Distal,intron-Proximal4.282008.71581K562PCBP1
chr191536784015367964-CDS,intron-Distal3.4662715.55994K562FXR2
chr191537966215379719-CDS,intron-Distal,intron-Proximal4.273997.79098HepG2PRPF8
chr191537629015376405-CDS,intron-Distal,intron-Proximal4.4248433.70228HepG2PCBP2
chr191536626715366293-CDS,intron-Distal,intron-Proximal3.9024413.20706K562PUM1
chr191535372015353772-CDS,intron-Distal4.301359.12897HepG2DDX59
chr191538363115383677-CDS,intron-Distal3.127827.10982HepG2GRWD1
chr191535048115350532-CDS,intron-Distal3.085604.99629K562PUM1
chr191535381415353862-CDS,intron-Distal3.730346.49751K562IGF2BP2
chr191535372815353755-CDS,intron-Distal4.4428616.98646HepG2IGF2BP1
chr191536688115366964-CDS,intron-Distal,intron-Proximal5.7509324.01049K562UCHL5
chr191536689315366967-CDS,intron-Distal,intron-Proximal3.516393.06344K562TRA2A
chr191537970215379720-CDS,intron-Distal,intron-Proximal3.284595.28960K562AQR
chr191535510515355186-CDS,intron-Distal4.3989415.84509HepG2PCBP2
chr191535372615353751-CDS,intron-Distal6.3529224.48016K562IGF2BP2
chr191536616315366230-CDS,intron-Distal,intron-Proximal3.6787015.54920HepG2GRWD1
chr191535504015355221-CDS,intron-Distal,intron-Proximal3.7511414.42852HepG2IGF2BP3
chr191536495915365008-CDS,intron-Distal,intron-Proximal3.666003.23099HepG2UCHL5
chr191537628815376346-CDS,intron-Distal,intron-Proximal3.1204512.85069HepG2IGF2BP1
chr191535388315353932-CDS,intron-Distal3.320445.20672HepG2PCBP2
chr191535379615353908-CDS,intron-Distal6.2663433.54553HepG2DDX59
chr191537973715379767-CDS,intron-Distal,intron-Proximal3.898116.84754HepG2GRWD1
chr191535376515353839-CDS,intron-Distal5.050539.67229HepG2PCBP2
chr191536687415367022-CDS,intron-Distal,intron-Proximal3.177334.19898HepG2TRA2A
chr191535517315355186-CDS,intron-Distal3.343637.17953K562RBM15
chr191535520315355343-CDS,intron-Distal,intron-Proximal4.9050523.33756HepG2PCBP2
chr191537628315376345-CDS,intron-Distal,intron-Proximal3.6929013.01951K562IGF2BP2
chr191536496215364978-CDS,intron-Distal,intron-Proximal3.841117.05173K562ZNF622
chr191535504015355073-CDS,intron-Distal,intron-Proximal4.1470216.03101K562IGF2BP2
chr191534995115349997-CDS,intron-Distal4.3836310.21839K562YBX3
chr191535523215355327-CDS,intron-Distal,intron-Proximal3.147957.19744K562IGF2BP2
chr191535509015355123-CDS,intron-Distal3.053606.19730K562ZNF622
chr191534970515349798-CDS,intron-Distal,intron-Proximal3.073303.10677K562SRSF1
chr191536777615367848-CDS,intron-Distal3.4896414.08059K562UCHL5
chr191536620515366334-CDS,intron-Distal,intron-Proximal3.129125.59465K562TRA2A
chr191535507315355180-CDS,intron-Distal3.346828.47506K562PCBP1
chr191535506815355173-CDS,intron-Distal4.1224711.60575K562HNRNPK
chr191535387215353944-CDS,intron-Distal3.8597612.85397HepG2HNRNPK
chr191535373915353843-CDS,intron-Distal4.3577710.28345K562HNRNPK
chr191535405615354113-CDS,intron-Distal3.466443.74485K562DROSHA
chr191536629315366336-CDS,intron-Distal3.2273111.16338K562PUM1
chr191535074215350813-CDS,intron-Distal3.572624.79909K562HNRNPK
chr191535428315354298-CDS,intron-Distal3.994319.60199K562IGF2BP2
chr191535414915354236-CDS,intron-Distal4.5610214.68269HepG2PCBP2
chr191535554315355590-CDS,intron-Distal,intron-Proximal3.924713.91876HepG2U2AF2
chr191536612815366254-CDS,intron-Distal,intron-Proximal3.690477.04407HepG2UCHL5
chr191535072015350783-CDS,intron-Distal,intron-Proximal3.7899912.01318HepG2IGF2BP1
chr191537977815379841-CDS,intron-Distal,intron-Proximal4.5352611.52853HepG2GRWD1
chr191536687415366925-CDS,intron-Distal,intron-Proximal4.7037012.86440HepG2BCLAF1
chr191535499615355061-CDS,intron-Distal,intron-Proximal3.3831612.51748HepG2PRPF8
chr191535376515353801-CDS,intron-Distal4.260818.57234K562IGF2BP2
chr191537532415375411-CDS,intron-Distal3.305229.41308K562UCHL5
chr191537616215376249-CDS,intron-Distal,intron-Proximal3.081856.28262K562PUM1
chr191536625815366314-CDS,intron-Distal,intron-Proximal3.567328.39843HepG2GRWD1
chr191537616515376201-CDS,intron-Distal3.831138.71584K562IGF2BP2
chr191536495815365001-CDS,intron-Distal,intron-Proximal4.8202015.84569HepG2GRWD1
chr191535407415354136-CDS,intron-Distal4.5382217.26273HepG2DDX59
chr191535028215350297-CDS,intron-Distal3.383979.93836K562YBX3
chr191536783415367937-CDS,intron-Distal5.5324810.20707HepG2ZNF800
chr191535420615354258-CDS,intron-Distal3.4330310.76175K562IGF2BP2
chr191535535715355407-CDS,intron-Distal3.466047.85158K562UCHL5
chr191535057915350628-CDS,intron-Distal,intron-Proximal3.110116.29223K562UCHL5
chr191536500115365059-CDS,intron-Distal4.5835318.77251HepG2GRWD1
chr191535061715350696-CDS,intron-Distal,intron-Proximal4.254754.24670HepG2SF3B4
chr191537972815379846-CDS,intron-Distal,intron-Proximal3.2110621.46021K562ZNF622
chr191535507315355118-CDS,intron-Distal4.9057923.93375K562IGF2BP2
chr191535371015353728-CDS,intron-Distal,intron-Proximal4.0156615.53707HepG2IGF2BP1
chr191537634615376371-CDS,intron-Distal,intron-Proximal3.4951414.00808HepG2IGF2BP1
chr191535425815354283-CDS,intron-Distal4.7642512.45575K562IGF2BP2
chr191535552115355556-CDS,intron-Distal3.185106.05977K562UCHL5
chr191535374815353822-CDS,intron-Distal4.178673.88780HepG2G3BP1
chr191535539815355530-CDS,intron-Distal,intron-Proximal3.5716318.92504HepG2PRPF8
chr191536605715366112-CDS,intron-Distal,intron-Proximal3.205636.55928HepG2PRPF8
chr191538357815383662-CDS,intron-Distal,intron-Proximal3.6529112.21404HepG2PRPF8
chr191535384315353921-CDS,intron-Distal4.918906.03675K562HNRNPK
chr191536783415367900-CDS,intron-Distal3.2698910.76543HepG2GRWD1
chr191535030715350322-CDS,intron-Distal3.175933.79741HepG2GRWD1
chr191537629015376377-CDS,intron-Distal,intron-Proximal4.064149.84066HepG2DDX59
chr191537432415374368-CDS,intron-Distal,intron-Proximal4.030277.57443HepG2BUD13
chr191536497815365001-CDS,intron-Distal3.232339.54151K562ZNF622
chr191536633415366405-CDS,intron-Distal,intron-Proximal3.3476611.45165K562GRWD1
chr191535079815350834-CDS,intron-Distal,intron-Proximal4.628314.62831HepG2PCBP2
chr191535523015355307-CDS,intron-Distal,intron-Proximal3.672259.35115HepG2DDX59
chr191535042215350477-CDS,intron-Distal,intron-Proximal3.124753.03237HepG2AQR
chr191536797215368059-CDS,intron-Distal,intron-Proximal5.2959923.14881K562SF3B4
chr191536633415366403-CDS,intron-Distal3.892277.20537K562TRA2A
chr191535518915355284-CDS,intron-Distal,intron-Proximal3.021685.61044K562HNRNPK
chr191535503915355068-CDS,intron-Distal,intron-Proximal3.786935.89669K562HNRNPK
chr191536633615366384-CDS,intron-Distal3.7396917.50416K562ZNF622
chr191535057615350631-CDS,intron-Distal,intron-Proximal3.081206.33847K562IGF2BP2
chr191535412915354206-CDS,intron-Distal4.0368411.95523K562IGF2BP2
chr191535000815350065-CDS,intron-Distal3.998586.80293K562YBX3
chr191537627915376332-CDS,intron-Distal4.2092213.54973K562UCHL5
chr191537420115374311-CDS,intron-Distal,intron-Proximal3.493243.30959HepG2AQR
chr191537423015374330-CDS,intron-Distal,intron-Proximal3.9481222.96674HepG2GRWD1
chr191536687415366895-CDS,intron-Distal,intron-Proximal3.280065.76243HepG2BUD13
chr191537614115376218-CDS,intron-Distal,intron-Proximal5.3426818.12830HepG2PRPF8
chr191535072015350804-CDS,intron-Distal,intron-Proximal4.2550912.14803K562IGF2BP1
chr191535508415355159-CDS,intron-Distal3.042339.38628HepG2DDX59
chr191537528515375332-CDS,intron-Distal,intron-Proximal4.9444514.19533K562RBM15
chr191536619215366267-CDS,intron-Distal,intron-Proximal3.2390316.12142K562PUM1
chr191537548915375651-CDS,intron-Distal,intron-Proximal3.028435.00036HepG2AQR
chr191536445015364509-CDS,intron-Distal,intron-Proximal3.198703.80158K562NONO
chr191536613615366208-CDS,intron-Distal,intron-Proximal3.085525.43306HepG2FXR2
chr191536611015366227-CDS,intron-Distal,intron-Proximal3.8580923.87952K562UCHL5
chr191535075215350782-CDS,intron-Distal3.017555.18023HepG2GRWD1
chr191536777515367846-CDS,intron-Distal3.7393518.60439K562ZNF622
chr191537524815375316-CDS,intron-Distal,intron-Proximal3.112487.93308K562FXR2
chr191536778015367833-CDS,intron-Distal4.602984.95780HepG2ZNF800
chr191537624715376393-CDS,intron-Distal,intron-Proximal4.0370535.32856K562PCBP1
chr191535042115350477-CDS,intron-Distal,intron-Proximal3.308328.16221HepG2PRPF8
chr191536622715366335-CDS,intron-Distal,intron-Proximal3.8783820.43538K562UCHL5
chr191535375515353826-CDS,intron-Distal3.4085213.51753HepG2IGF2BP1
chr191535078315350820-CDS,intron-Distal4.0348015.56633K562IGF2BP2
chr191535379515353872-CDS,intron-Distal3.9947013.52713HepG2HNRNPK
chr191536638415366404-CDS,intron-Distal,intron-Proximal3.2651114.25139K562ZNF622
chr191535518015355221-CDS,intron-Distal4.6240410.28502K562ZNF622
chr191536635915366405-CDS,intron-Distal,intron-Proximal3.289618.37988HepG2BUD13
chr191535024715350303-CDS,intron-Distal3.589475.69590K562DDX24
chr191535024515350329-CDS,intron-Distal3.0779412.83416K562ZNF622
chr191535078315350834-CDS,intron-Distal,intron-Proximal3.9685713.34084HepG2IGF2BP1
chr191535395115353990-CDS,intron-Distal5.372216.65725HepG2DDX59
chr191537611215376170-CDS,intron-Distal,intron-Proximal3.7475910.82062K562AQR
chr191535082015350833-CDS,intron-Distal5.0536527.29720K562IGF2BP2
chr191536796415368045-CDS,intron-Distal,intron-Proximal3.830769.79360HepG2SF3B4
chr191537423015374312-CDS,intron-Distal,intron-Proximal3.752687.57565HepG2UCHL5
chr191535425315354299-CDS,intron-Distal,intron-Proximal3.098444.10159HepG2PCBP2
chr191536611215366150-CDS,intron-Distal3.709858.57574HepG2PPIG
chr191535396315354016-CDS,intron-Distal3.445404.21858HepG2HNRNPK
chr191534976015349786-CDS,intron-Distal,intron-Proximal3.521035.17903K562UCHL5
chr191534971515349752-CDS,intron-Distal3.733826.77066K562UCHL5
chr191534924015349279-CDS,intron-Distal5.253897.28294K562AQR
chr191535407215354224-CDS,intron-Distal3.9083713.85639K562HNRNPK
chr191536689715366950-CDS,intron-Distal,intron-Proximal3.5271314.75009K562ZNF622
chr191535547915355532-CDS,intron-Distal,intron-Proximal3.539797.99229HepG2AQR
chr191535370915353726-CDS,intron-Distal,intron-Proximal4.9201624.40868K562IGF2BP2
chr191536784815367977-CDS,intron-Distal3.6472719.48856K562FMR1
chr191535079615350833-CDS,intron-Distal4.595387.13227HepG2IGF2BP3
chr191535422115354299-CDS,intron-Distal,intron-Proximal3.994788.05650HepG2IGF2BP3
chr191534951915349555-CDS,intron-Distal,intron-Proximal4.235954.27476HepG2AQR
chr191535553015355570-CDS,intron-Distal3.398807.44807HepG2GRWD1
chr191537619015376264-CDS,intron-Distal6.1038613.54105HepG2PCBP2
chr191536612615366202-CDS,intron-Distal,intron-Proximal3.3597028.64306K562ZNF622
chr191536687315366879-CDS,intron-Distal,intron-Proximal3.312007.27385K562GRWD1
chr191537543515375514-CDS,intron-Distal3.442326.04547K562IGF2BP2
chr191537971415379733-CDS,intron-Distal,intron-Proximal3.290225.74118K562YBX3
chr191536777615367838-CDS,intron-Distal3.434953.81194K562TRA2A
chr191536613615366163-CDS,intron-Distal3.3922110.78389HepG2GRWD1
chr191535072315350783-CDS,intron-Distal,intron-Proximal4.2998414.45207K562IGF2BP2
chr191535072015350747-CDS,intron-Distal,intron-Proximal3.755568.82426K562ZNF622
chr191537418715374263-CDS,intron-Distal,intron-Proximal4.5229226.67913HepG2PRPF8
chr191535073115350781-CDS,intron-Distal,intron-Proximal3.875093.82009HepG2IGF2BP3
chr191537620115376243-CDS,intron-Distal5.284579.97086K562IGF2BP2
chr191535057315350632-CDS,intron-Distal,intron-Proximal3.900697.23979K562IGF2BP1
chr191535025615350265-CDS,intron-Distal3.309338.98498K562YBX3
chr191535073715350797-CDS,intron-Distal4.237319.27196HepG2DDX59
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chr191535394915353997-CDS,intron-Distal4.587328.09313HepG2PCBP2
chr191538378615383857-CDS,intron-Distal,intron-Proximal3.441048.72077K562ZNF800
chr191536495315365047-CDS,intron-Distal,intron-Proximal3.597128.77723HepG2PPIG
chr191537971215379789-CDS,intron-Distal,intron-Proximal3.357599.12012HepG2BCLAF1
chr191536497315365065-CDS,intron-Distal3.2595811.75385K562UCHL5
chr191535503915355105-CDS,intron-Distal,intron-Proximal4.0585816.65598HepG2PCBP2
chr191537522615375285-CDS,intron-Distal,intron-Proximal3.040985.76198K562RBM15
chr191536635515366422-CDS,intron-Distal,intron-Proximal3.153279.47496HepG2AQR
chr191536635615366404-CDS,intron-Distal,intron-Proximal4.248085.72609K562MTPAP
chr191536796815367985-CDS,intron-Distal,intron-Proximal3.173684.09741HepG2PPIG
chr191544189915441940-intron-Distal3.620647.59385K562NONO
chr191537836615378440-intron-Distal,intron-Proximal5.199749.00594HepG2SF3B4
chr191540807515408141-intron-Distal3.687196.07711K562HNRNPM
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chr191539581815395882-intron-Distal3.103713.77382HepG2HNRNPM
chr191541463915414709-intron-Distal4.667985.12361K562EXOSC5
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chr191537609115376141-intron-Distal,intron-Proximal5.5180314.79448HepG2PRPF8
chr191535733015357395-intron-Distal3.301673.45841K562HNRNPK
chr191542838015428489-intron-Distal5.117057.46068HepG2HNRNPK
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chr191535710715357135-intron-Distal4.540733.97933HepG2DDX59
chr191534943515349503-intron-Distal,intron-Proximal5.0916213.40185K562AQR
chr191537955915379690-intron-Distal,intron-Proximal3.024896.57576K562PRPF8
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chr191537498015375018-intron-Distal3.726405.13030K562RBM15
chr191544179815441818-intron-Distal4.058746.90098K562TIA1
chr191540805515408127-intron-Distal3.783256.58367HepG2HNRNPM
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chr191541798815418037-intron-Distal3.919643.27946HepG2HNRNPM
chr191537804215378152-intron-Distal,intron-Proximal5.304364.65563K562AQR
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chr191544284615442918-intron-Distal3.185589.25952HepG2CSTF2T
chr191537966815379702-intron-Distal,intron-Proximal3.721837.64728K562AQR
chr191537557815375620-intron-Distal,intron-Proximal3.133025.84601HepG2PRPF8
chr191544210415442221-intron-Distal3.9816717.01978K562CSTF2T
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chr191536773215367769-intron-Distal,intron-Proximal5.708598.88118K562AQR
chr191541781615417891-intron-Distal3.109964.73383HepG2HNRNPM
chr191543928215439377-intron-Distal4.358864.31871HepG2HNRNPM
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chr191544237415442452-intron-Distal4.103959.38883K562EWSR1
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chr191543020415430265-intron-Distal3.015004.63037HepG2HNRNPC
chr191535559015355637-intron-Distal,intron-Proximal3.917784.16338HepG2RBM5
chr191544237515442452-intron-Distal3.599286.63765K562EIF4G2
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chr191540768415407739-intron-Distal3.135133.29754HepG2SFPQ
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chr191541533415415426-intron-Distal3.625788.35508K562NONO
chr191536606315366086-intron-Distal,intron-Proximal4.556756.48405K562AQR
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chr191537986615379907-intron-Distal,intron-Proximal3.656994.84442HepG2SF3B4
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chr191536800215368045-intron-Distal,intron-Proximal4.256273.59236HepG2AQR
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chr191541420615414252-intron-Distal4.926896.95924HepG2HNRNPM
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chr191536641815366475-intron-Distal,intron-Proximal4.344745.07796HepG2SF3B4
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chr191535542815355482-intron-Distal,intron-Proximal3.757277.33329HepG2SF3B4
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chr191541516815415261-intron-Distal4.087365.85006K562NONO
chr191534950515349534-intron-Distal,intron-Proximal5.6223716.58923K562AQR
chr191542886615428910-intron-Distal3.074093.58549K562NONO
chr191536461415364701-intron-Distal4.372174.78076K562HNRNPM
chr191544185915441888-intron-Distal4.701535.81141K562CSTF2T
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chr191536483015364912-intron-Distal,intron-Proximal3.605005.30350K562HNRNPM
chr191543293415432980-intron-Distal4.499814.66110HepG2SFPQ
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chr191537605015376099-intron-Distal,intron-Proximal5.928689.49201HepG2RBM22
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chr191537948615379544-intron-Distal5.461814.83371K562EFTUD2
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chr191535759915357642-intron-Distal4.221594.36133HepG2CSTF2T
chr191544210115442193-intron-Distal4.2614218.53316K562NONO
chr191544080815440901-intron-Distal4.169616.92280HepG2HNRNPM
chr191544237315442459-intron-Distal4.9420222.29658K562NONO
chr191543526215435319-intron-Distal3.129453.00881K562HNRNPM
chr191541168715411751-intron-Distal4.156613.27946HepG2HNRNPM
chr191534951015349554-intron-Distal,intron-Proximal3.688848.39123HepG2PRPF8
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chr191536776915367775-intron-Distal,intron-Proximal3.810835.35619K562AQR
chr191537609915376142-intron-Distal,intron-Proximal5.576658.38828HepG2RBM22
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chr191543262015432706-intron-Distal3.853419.46368K562HNRNPM
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chr191542936915429424-intron-Distal4.468493.04182K562HNRNPM
chr191536487915364957-intron-Distal,intron-Proximal3.820936.35344K562PRPF8
chr191544272115442753-intron-Distal,intron-Proximal4.094443.85108HepG2GTF2F1
chr191537957815379662-intron-Distal,intron-Proximal4.1949413.00591HepG2EFTUD2
chr191541425215414298-intron-Distal3.962096.92280HepG2HNRNPM
chr191544238215442423-intron-Distal3.630966.52725K562AKAP8L
chr191541500315415076-intron-Distal3.491194.09779K562NONO
chr191544260415442637-intron-Distal4.812876.16396K562NONO
chr191544206315442078-intron-Distal4.711886.67086K562NONO
chr191542465415424707-intron-Distal3.465906.58367HepG2HNRNPM
chr191535543815355479-intron-Distal,intron-Proximal3.419015.10493HepG2AQR
chr191537810815378192-intron-Distal,intron-Proximal4.684884.22101K562PRPF8
chr191539700615397062-intron-Distal3.130534.49514HepG2XPO5
chr191535497215355016-intron-Distal,intron-Proximal5.2785614.99196K562AQR
chr191544233015442386-intron-Distal4.728936.08412HepG2HNRNPM
chr191540821415408275-intron-Distal3.400785.21690HepG2HNRNPM
chr191542915315429195-intron-Distal3.973573.27582HepG2SFPQ
chr191544189415441934-intron-Distal3.132323.68431K562TARDBP
chr191537558315375658-intron-Distal,intron-Proximal3.482177.21382HepG2SF3B4
chr191538511915385232-intron-Distal4.234284.07750HepG2HNRNPK
chr191540812415408208-intron-Distal3.145013.31224K562HNRNPA1
chr191536214615362185-intron-Distal3.139713.14365K562NONO
chr191544225715442295-intron-Distal3.195237.69813K562NONO
chr191539459415394645-intron-Distal4.682386.08412HepG2HNRNPM
chr191544304715443076-intron-Distal3.702544.29728K562GEMIN5
chr191538394415383995-intron-Distal,intron-Proximal4.604399.04180K562SF3B4
chr191542942415429492-intron-Distal3.859173.59509K562HNRNPM
chr191534953415349554-intron-Distal,intron-Proximal6.2174415.72370K562AQR
chr191537985315379908-intron-Distal,intron-Proximal4.173498.34684K562SF3B4
chr191544271815442767-intron-Distal,intron-Proximal3.682498.53812HepG2FAM120A
chr191544236515442462-intron-Distal4.3455718.56819K562CSTF2T
chr191544206415442156-intron-Distal3.036805.39247K562EWSR1
chr191544217815442222-intron-Distal3.553573.72904K562EXOSC5
chr191541013415410232-intron-Distal3.171715.80490K562TARDBP
chr191535717815357260-intron-Distal4.312204.33150K562HNRNPK
chr191543863915438713-intron-Distal4.1644911.08040HepG2HNRNPK
chr191544216415442215-intron-Distal3.694286.14207K562DROSHA
chr191544284715442888-intron-Distal4.125466.77154K562NONO
chr191544236815442460-intron-Distal3.405739.62988HepG2FAM120A
chr191542549615425558-intron-Distal4.386094.31871HepG2HNRNPM
chr191542943115429490-intron-Distal3.977386.29995HepG2HNRNPM
chr191544296815443000-intron-Distal3.218475.20317K562NONO
chr191537954415379665-intron-Distal,intron-Proximal5.4311112.38995K562EFTUD2
chr191543535415435398-intron-Distal4.009453.98553K562NONO
chr191544303215443083-intron-Distal4.294414.69321HepG2GTF2F1
chr191537602915376095-intron-Distal,intron-Proximal3.591956.70109K562PRPF8
chr191535542815355478-intron-Distal,intron-Proximal3.116353.67625K562XRN2
chr191536261515362683-intron-Distal3.918903.33442K562HNRNPK
chr191543489615434952-intron-Distal3.122023.91933K562EXOSC5
chr191544302215443088-intron-Distal4.4127613.13888K562CSTF2T
chr191544284115442894-intron-Distal3.793354.98844HepG2FAM120A
chr191544293515443009-intron-Distal3.3761811.54685K562TIA1
chr191540771015407759-intron-Distal3.273904.49282HepG2HNRNPM
chr191536680515366867-intron-Distal,intron-Proximal3.738343.88924K562PRPF8
chr191541803715418128-intron-Distal3.935863.68481HepG2HNRNPM
chr191543275315432868-intron-Distal4.9182316.15216K562TARDBP
chr191541510715415168-intron-Distal3.120644.45679K562NONO
chr191543255515432613-intron-Distal3.027464.01428K562TARDBP
chr191541779515417879-intron-Distal3.186603.73564K562RBFOX2
chr191543200815432062-intron-Distal3.646785.33544K562MATR3
chr191535719515357298-intron-Distal3.236587.92661HepG2HNRNPK
chr191544139615441413-intron-Distal3.356725.02670K562TIA1
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for BRD4 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for BRD4 is not available on ENCORE database.

  • 95 RBPs can affect the levels of BRD4.  








The Knockdown/knockout RNA-Seq assay for BRD4 is not available on ENCORE database.





95 RBPs can affect the gene expression of BRD4 :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
BRD4ENSG00000141867.131302.74500990.052200.395902.376601.44980HepG2ADAR
BRD4ENSG00000141867.131935.313402582.42680-0.416207.666406.61660HepG2AUH
BRD4ENSG00000141867.131577.459601983.22130-0.330202.737601.96990HepG2CALR
BRD4ENSG00000141867.133873.997602793.424000.471706.578404.93350HepG2CPSF7
BRD4ENSG00000141867.131672.517101381.285200.275903.064302.39440HepG2CELF1
BRD4ENSG00000141867.13882.684201205.72940-0.449902.104201.31830HepG2DDX24
BRD4ENSG00000141867.132740.461101361.757801.0088014.5430013.27290HepG2DDX6
BRD4ENSG00000141867.131355.34160996.925100.443004.182603.33330HepG2DNAJC21
BRD4ENSG00000141867.131377.60720988.143700.479309.187908.08100HepG2DNAJC2
BRD4ENSG00000141867.13758.233001134.48020-0.581302.755101.65110HepG2AGO1
BRD4ENSG00000141867.131964.793501308.403600.586504.367103.63180HepG2EIF2S1
BRD4ENSG00000141867.133479.690002573.160600.435305.932504.26750HepG2EIF2S2
BRD4ENSG00000141867.132098.447501459.563100.523702.940802.22600HepG2FXR1
BRD4ENSG00000141867.13638.405801002.74640-0.651404.553203.24190HepG2GNB2L1
BRD4ENSG00000141867.133249.225804241.54120-0.384503.067702.39850HepG2GPKOW
BRD4ENSG00000141867.132461.140301893.126100.378506.478005.44310HepG2HNRNPF
BRD4ENSG00000141867.132048.447601371.705500.578503.907603.09080HepG2HNRNPK
BRD4ENSG00000141867.131999.190801352.865000.5633015.2237013.75610HepG2HNRNPL
BRD4ENSG00000141867.131504.463501112.123700.435807.086406.15130HepG2HNRNPU
BRD4ENSG00000141867.132068.122803004.08090-0.538604.501902.93360HepG2HSPD1
BRD4ENSG00000141867.132336.181901864.191100.325503.495502.68910HepG2IGF2BP1
BRD4ENSG00000141867.132163.807301375.543400.653505.889804.94200HepG2IGF2BP2
BRD4ENSG00000141867.131512.535801135.996300.412908.141406.95220HepG2ILF2
BRD4ENSG00000141867.132405.320801460.077100.720105.181704.29050HepG2MAGOH
BRD4ENSG00000141867.131938.212601468.085400.400702.024701.48000HepG2MATR3
BRD4ENSG00000141867.132011.524402772.08400-0.462706.033004.88060HepG2MSI2
BRD4ENSG00000141867.132157.159301502.534000.521603.085902.41930HepG2NCBP2
BRD4ENSG00000141867.131800.997701472.697500.290202.961602.17310HepG2NOL12
BRD4ENSG00000141867.132011.726601267.233300.666704.069602.97880HepG2PABPC1
BRD4ENSG00000141867.131331.177701100.803000.274002.842901.98440HepG2PARN
BRD4ENSG00000141867.132406.137601413.196800.767707.525906.60310HepG2PCBP1
BRD4ENSG00000141867.131751.44410991.924200.8201019.5041017.68450HepG2PPIL4
BRD4ENSG00000141867.131863.548301438.142600.373702.453301.93330HepG2PTBP1
BRD4ENSG00000141867.132269.850401492.367700.6049019.3018018.02200HepG2PUM1
BRD4ENSG00000141867.131998.550701491.268100.422305.446504.52060HepG2PUM2
BRD4ENSG00000141867.132074.511301557.198800.413703.267502.59680HepG2QKI
BRD4ENSG00000141867.131343.22090962.247400.481103.272502.11670HepG2RCC2
BRD4ENSG00000141867.131997.986501600.380000.320002.214201.71930HepG2NELFE
BRD4ENSG00000141867.131915.814501490.780600.361802.777602.15970HepG2RECQL
BRD4ENSG00000141867.131484.414301185.487400.324302.078201.53890HepG2RPS19
BRD4ENSG00000141867.131420.76310990.391100.520509.960708.85570HepG2SAFB2
BRD4ENSG00000141867.135552.866904006.560400.470805.985504.98110HepG2SF3B1
BRD4ENSG00000141867.132323.468901497.001600.634107.705406.79660HepG2SF3B4
BRD4ENSG00000141867.131967.374701348.004800.5453013.8265012.46520HepG2SLBP
BRD4ENSG00000141867.131854.262801346.044600.462002.496101.59050HepG2SMNDC1
BRD4ENSG00000141867.132571.077404457.97680-0.794007.006205.75610HepG2SNRNP70
BRD4ENSG00000141867.133499.031202799.028400.321906.061305.39890HepG2SRFBP1
BRD4ENSG00000141867.131170.763801562.66410-0.416601.916801.50260HepG2SRSF1
BRD4ENSG00000141867.136115.284404310.881100.504304.270802.99900HepG2SRSF3
BRD4ENSG00000141867.131903.125801388.072300.455208.262707.25580HepG2SRSF5
BRD4ENSG00000141867.132389.160401859.925800.361206.115005.14460HepG2SRSF7
BRD4ENSG00000141867.131574.416501271.412600.308301.873301.40310HepG2SRSF9
BRD4ENSG00000141867.131854.087601578.605000.232003.059702.41170HepG2SUCLG1
BRD4ENSG00000141867.131642.563501290.574100.347802.082301.35430HepG2TIA1
BRD4ENSG00000141867.131397.534301090.297900.358104.663503.96990HepG2TRIM56
BRD4ENSG00000141867.131887.890501373.463000.458905.616804.31810HepG2TUFM
BRD4ENSG00000141867.134876.438402930.002600.7348012.1145010.77170HepG2U2AF1
BRD4ENSG00000141867.136733.841902575.308201.386605.845504.36010HepG2U2AF2
BRD4ENSG00000141867.132160.247901453.805300.571305.587904.37160HepG2UBE2L3
BRD4ENSG00000141867.132365.269703081.53230-0.381607.944206.86180HepG2UPF1
BRD4ENSG00000141867.132628.047703167.32770-0.269303.636902.45270HepG2UTP18
BRD4ENSG00000141867.133935.009202975.086800.403303.203202.56700HepG2UTP3
BRD4ENSG00000141867.131982.639502327.56460-0.231403.305402.58180HepG2ZC3H8
BRD4ENSG00000141867.132900.640303389.08500-0.224503.329902.74640HepG2ZNF622
BRD4ENSG00000141867.136017.742004826.439700.318206.118805.32630K562AGGF1
BRD4ENSG00000141867.133915.831002499.960200.647309.981908.97270K562AQR
BRD4ENSG00000141867.132659.317703238.67660-0.284302.183201.41470K562BOP1
BRD4ENSG00000141867.132383.632301558.238100.613106.023904.30800K562CCAR1
BRD4ENSG00000141867.132804.720203443.61490-0.296103.311502.45120K562CPSF6
BRD4ENSG00000141867.135319.040004383.644400.278904.508103.70310K562DDX47
BRD4ENSG00000141867.132333.490101744.608500.419502.795701.46080K562DHX30
BRD4ENSG00000141867.132212.428001365.254700.696409.185907.42920K562EFTUD2
BRD4ENSG00000141867.133026.524002237.194100.435907.967906.84290K562EIF2S2
BRD4ENSG00000141867.132540.408001584.931700.680503.741802.55300K562EIF3A
BRD4ENSG00000141867.132156.459101461.548900.561104.189402.88400K562EIF3D
BRD4ENSG00000141867.131292.65310852.694000.600109.189707.74360K562EIF3G
BRD4ENSG00000141867.134241.610603428.521400.306904.509603.32320K562EIF4G2
BRD4ENSG00000141867.132308.220903062.29640-0.407802.054501.32030K562FIP1L1
BRD4ENSG00000141867.132221.597601754.490300.340401.937301.41330K562FXR1
BRD4ENSG00000141867.13517.97130819.86110-0.662504.760503.77590K562G3BP2
BRD4ENSG00000141867.132439.272702981.32230-0.289502.633201.89510K562GRSF1
BRD4ENSG00000141867.132206.654601653.712600.416104.710303.95170K562HNRNPC
BRD4ENSG00000141867.133037.843302459.948000.304302.150101.36380K562HNRNPU
BRD4ENSG00000141867.132042.539301164.251700.810909.294206.99990K562IGF2BP2
BRD4ENSG00000141867.131483.193901184.003500.324902.606701.46100K562IGF2BP3
BRD4ENSG00000141867.131953.651301223.092500.6755010.745009.02120K562MAGOH
BRD4ENSG00000141867.131706.254701220.536600.483205.954104.53000K562MATR3
BRD4ENSG00000141867.131743.854101195.800700.544207.629605.30560K562PCBP1
BRD4ENSG00000141867.132070.126601088.159900.9277018.0922015.47670K562PCBP2
BRD4ENSG00000141867.132414.866003475.97200-0.525503.184602.29570K562PPIG
BRD4ENSG00000141867.132535.491101328.555800.9323016.1974014.36380K562PRPF8
BRD4ENSG00000141867.131973.454101188.347600.7317013.3224011.91860K562PTBP1
BRD4ENSG00000141867.134695.459103740.738500.327803.447202.53880K562PUF60
BRD4ENSG00000141867.131942.178001139.215600.7695012.0745010.13950K562RBM22
BRD4ENSG00000141867.131736.065801110.722800.644207.114204.67060K562RBM34
BRD4ENSG00000141867.131770.130701353.145000.387404.090102.88160K562RCC2
BRD4ENSG00000141867.132508.259102009.360900.319802.503201.55720K562RPS3
BRD4ENSG00000141867.133104.145402219.588800.483802.799601.71030K562SAFB
BRD4ENSG00000141867.133324.773903813.43990-0.197802.312101.56100K562SF3A3
BRD4ENSG00000141867.131209.38900852.056300.505206.089404.78530K562SF3B4
BRD4ENSG00000141867.134952.456303176.499600.640602.956401.67310K562SNRNP200
BRD4ENSG00000141867.131791.952501282.714900.482205.217703.68130K562SRFBP1
BRD4ENSG00000141867.132779.952301939.615500.519207.426405.57260K562SRSF4
BRD4ENSG00000141867.131591.175701100.421100.531905.808004.18540K562SRSF5
BRD4ENSG00000141867.131657.689001178.969600.491504.797803.85560K562TARDBP
BRD4ENSG00000141867.131757.355301137.280500.627709.627807.98760K562TIA1
BRD4ENSG00000141867.131781.984501116.291200.674706.443104.61140K562TRA2A
BRD4ENSG00000141867.133384.852702360.662700.519804.724002.35800K562TRNAU1AP
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for BRD4 is not available on ENCORE database.





11 RBPs can affect the splicing of BRD4 :

Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
SEBRD4ENSG00000141867.13chr19-153789641537909215378226153783621537971515379853-0.065000.000000.00005excludedK562AKAP8L
SEBRD4ENSG00000141867.13chr19-153821321538220315379715153798531538362515383792-0.054000.000080.00417excludedK562AKAP8L
SEBRD4ENSG00000141867.13chr19-1537896415379092153782261537836215379715153798530.104000.000550.06793includedHepG2HNRNPM
SEBRD4ENSG00000141867.13chr19-153789641537909215378226153783621537971515379853-0.077000.000010.00020excludedHepG2U2AF2
SEBRD4ENSG00000141867.13chr19-1537896415379092153782261537836215379715153798530.109000.000000.00001includedK562AQR
SEBRD4ENSG00000141867.13chr19-153789641537909215378226153783621537971515379853-0.062000.000900.07402excludedHepG2SRSF7
SEBRD4ENSG00000141867.13chr19-153789641537909215378226153783621537971515379853-0.068000.000000.00000excludedK562PUS1
SEBRD4ENSG00000141867.13chr19-153789641537909215378226153783621537971515379853-0.053000.000010.00052excludedK562UTP18
SEBRD4ENSG00000141867.13chr19-153789641537909215378226153783621537971515379853-0.061000.000000.00008excludedK562RBM15
SEBRD4ENSG00000141867.13chr19-153789641537909215378226153783621537971515379853-0.065000.000000.00001excludedK562AGGF1
SEBRD4ENSG00000141867.13chr19-1538213215382203153797151537985315383625153837920.093000.000010.00682includedK562SERBP1
A3SSBRD4ENSG00000141867.13chr19-153677741536800315367774153679841537423015374359-0.055000.000640.01878shorterHepG2U2AF2
A3SSBRD4ENSG00000141867.13chr19-1538213215382275153821321538220315383625153837920.818000.000130.00109longerK562AQR
A3SSBRD4ENSG00000141867.13chr19-1535072015350916153507201535083315353710153542980.058000.000350.00271longerK562AQR
A3SSBRD4ENSG00000141867.13chr19-1536687415367122153668741536707415367774153680120.092000.000000.00003longerK562AQR
A3SSBRD4ENSG00000141867.13chr19-1536777415368012153677741536798415374230153743590.065000.000030.00027longerK562AQR
A3SSBRD4ENSG00000141867.13chr19-153677741536800315367774153679841537423015374359-0.055000.000570.08306shorterHepG2SFPQ

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".





The Knockdown/knockout RNA-Seq assay for BRD4 is not avaliable on ENCORE database.