SLC38A2

General Information

Gene Name : SLC38A2
Gene ID : ENSG00000134294.13
Essential Gene : No

Functions

Not Available

Localization

Not Available

Domains (AlphaFold: SLC38A2)

Not Available

Antibody Validation

Not Avaiable

Expression Level in Cell lines

Cell Line	Gene Name	Ensembl ID	Rep1 TPM	Rep2 TPM	Average TPM	Experiment ID
Gm12878	SLC38A2	ENSG00000134294.13	72.76	57.32	65.04	ENCSR000AEF
HepG2	SLC38A2	ENSG00000134294.13	149.69	245.36	197.53	ENCSR985KAT
K562	SLC38A2	ENSG00000134294.13	150.74	121.18	135.96	ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.

eCLIP

No eCLIP experiment available

Antibody Validation

No Antibody Primary Validation image or Secondary image available

KD RNA-Seq

No KD RNA-Seq experiment available

RNA Bind-n-Seqn

No RBNS experiment available

Localization Image in HepG2

No Localization Information available

RBP	Antibody Info	Primary-HepG2	Secondary-HepG2	Primary-K562	Secondary-K562	Primary-UBERON	Primary-Hela

Summary
Proteins Bound to RBP RNA

RNA Targets

eCLIP assay for SLC38A2 is not avaliable on ENCORE database.

Proteins bound to RNA

SLC38A2 RNA is bound by 58 proteins.

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eCLIP assay for SLC38A2 is not avaliable on ENCORE database.

58 proteins are bound to SLC38A2 RNA:

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Search:

Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name
chr12	46752394	46752447	-	3'-UTR,intron-Distal	3.65572	400.00000	HepG2	DDX55
chr12	46752425	46752481	-	3'-UTR,intron-Distal	3.15300	400.00000	HepG2	DGCR8
chr12	46757499	46757515	-	3'-UTR,CDS,intron-Distal,intron-Proximal	5.49791	400.00000	HepG2	PRPF8
chr12	46752054	46752111	-	3'-UTR,intron-Distal	6.53340	400.00000	K562	PUM2
chr12	46752111	46752194	-	3'-UTR,intron-Distal,intron-Proximal	5.86032	400.00000	K562	PUM2
chr12	46752424	46752519	-	3'-UTR,intron-Distal	6.65290	400.00000	K562	PUM2
chr12	46754895	46754951	-	3'-UTR,CDS,intron-Distal,intron-Proximal	5.37675	400.00000	HepG2	LIN28B
chr12	46754951	46754972	-	3'-UTR,CDS,intron-Distal	5.52195	400.00000	HepG2	LIN28B
chr12	46752021	46752095	-	3'-UTR,intron-Distal	3.54448	400.00000	HepG2	DDX55
chr12	46752467	46752481	-	3'-UTR,intron-Distal	3.98420	400.00000	HepG2	DDX55
Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name

Showing 1 to 10 of 418 entries

eCLIP assay for SLC38A2 is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout assay for SLC38A2 is not available on ENCORE database.
180 RBPs can affect the levels of SLC38A2.

CanvasJS.com

The Knockdown/knockout RNA-Seq assay for SLC38A2 is not available on ENCORE database.

180 RBPs can affect the gene expression of SLC38A2 :

Show entries

Search:

Gene Name	Gene ID	KDMean	CNMean	log2(fold change) *	-log(pval) **	-log(padj) **	Cell Line	Affected by RBP	Bound by RBP
SLC38A2	ENSG00000134294.9	15349.40620	63498.49190	-2.04850	99999.99999	99999.99999	HepG2	SRSF1
SLC38A2	ENSG00000134294.9	21611.78470	65029.12140	-1.58930	173.55300	171.01530	HepG2	NELFE
SLC38A2	ENSG00000134294.9	8212.09800	40306.71440	-2.29520	153.00770	149.50980	HepG2	PUF60
SLC38A2	ENSG00000134294.9	8289.21240	32108.01100	-1.95360	142.52550	139.95380	HepG2	TIAL1
SLC38A2	ENSG00000134294.9	21052.99170	45259.77520	-1.10420	119.00170	116.17710	HepG2	SUCLG1
SLC38A2	ENSG00000134294.9	25084.89090	60566.98300	-1.27170	117.83330	115.15890	HepG2	RECQL
SLC38A2	ENSG00000134294.9	18722.92710	34316.04670	-0.87410	91.94630	89.37070	HepG2	SMN1
SLC38A2	ENSG00000134294.9	27324.67120	58432.51560	-1.09660	81.09950	79.11770	HepG2	PTBP1
SLC38A2	ENSG00000134294.9	12796.86810	41489.57370	-1.69700	77.84870	75.56250	HepG2	PUS1
SLC38A2	ENSG00000134294.9	9730.48190	29904.12770	-1.61980	76.83720	74.46540	HepG2	HNRNPA1
Gene Name	Gene ID	KDMean	CNMean	log2(fold change)	-log(pval)	-log(padj)	Cell Line	Affected by RBP	Bound by RBP

Showing 1 to 10 of 237 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

The Knockdown/knockout RNA-Seq assay for SLC38A2 is not available on ENCORE database.

12 RBPs can affect the splicing of SLC38A2 :

Show entries

Search:

Event Type	Gene Name	Gene ID	chr	Strand	ExonStart	ExonEnd	upstreamES	upstreamEE	downstreamES	downstreamEE	dPSI	FDR	is_included	Cell Line	Affected by RBP
SE	SLC38A2	ENSG00000134294.9	chr12	-	46756803	46756928	46756276	46756421	46757508	46757609	-0.08000	0.00000	excluded	HepG2	U2AF1
SE	SLC38A2	ENSG00000134294.9	chr12	-	46756803	46756928	46756276	46756421	46757508	46757609	-0.11100	0.00000	excluded	HepG2	U2AF2
SE	SLC38A2	ENSG00000134294.9	chr12	-	46758426	46758485	46758171	46758339	46758889	46758972	-0.19800	0.00000	excluded	K562	AQR
SE	SLC38A2	ENSG00000134294.9	chr12	-	46760646	46760728	46758889	46758972	46760858	46760951	-0.11700	0.00000	excluded	K562	AQR
SE	SLC38A2	ENSG00000134294.9	chr12	-	46764294	46764410	46761049	46761123	46764558	46764640	-0.12600	0.00009	excluded	K562	AQR
SE	SLC38A2	ENSG00000134294.9	chr12	-	46764294	46764410	46761049	46761123	46764558	46764640	-0.06400	0.00000	excluded	HepG2	BCLAF1
SE	SLC38A2	ENSG00000134294.9	chr12	-	46756803	46756928	46756276	46756421	46757508	46757609	-0.13100	0.00000	excluded	K562	U2AF1
SE	SLC38A2	ENSG00000134294.9	chr12	-	46764294	46764410	46761049	46761123	46764558	46764640	-0.06500	0.00000	excluded	HepG2	SRSF1
SE	SLC38A2	ENSG00000134294.9	chr12	-	46764294	46764410	46761049	46761123	46764558	46764640	-0.11000	0.00000	excluded	HepG2	SF3A3
SE	SLC38A2	ENSG00000134294.9	chr12	-	46760646	46760704	46758781	46758972	46760858	46760951	-0.11100	0.00000	excluded	HepG2	SF3A3

Showing 1 to 10 of 28 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

SLC38A2

General Information

Functions

Localization

Domains (AlphaFold: SLC38A2)

Antibody Validation

Expression Level in Cell lines

Assays

RNA Targets

Proteins bound to RNA

eCLIP assay for SLC38A2 is not avaliable on ENCORE database.

58 proteins are bound to SLC38A2 RNA:

eCLIP assay for SLC38A2 is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout RNA-Seq assay for SLC38A2 is not available on ENCORE database.

180 RBPs can affect the gene expression of SLC38A2 :

The Knockdown/knockout RNA-Seq assay for SLC38A2 is not available on ENCORE database.

12 RBPs can affect the splicing of SLC38A2 :

The Knockdown/knockout RNA-Seq assay for SLC38A2 is not avaliable on ENCORE database.