KIFC1

General Information

Gene Name : KIFC1
Gene ID : ENSG00000237649.7
Essential Gene : Yes

Functions

Not Available

Localization

Not Available

Domains (AlphaFold: KIFC1)

Not Available

Antibody Validation

Not Avaiable

Expression Level in Cell lines

Cell Line	Gene Name	Ensembl ID	Rep1 TPM	Rep2 TPM	Average TPM	Experiment ID
Gm12878	KIFC1	ENSG00000237649.7	34.02	42.95	38.48	ENCSR000AEF
HepG2	KIFC1	ENSG00000237649.7	78.13	51.21	64.67	ENCSR985KAT
K562	KIFC1	ENSG00000237649.7	59.76	51.69	55.72	ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.

eCLIP

No eCLIP experiment available

Antibody Validation

No Antibody Primary Validation image or Secondary image available

KD RNA-Seq

No KD RNA-Seq experiment available

RNA Bind-n-Seqn

No RBNS experiment available

Localization Image in HepG2

No Localization Information available

RBP	Antibody Info	Primary-HepG2	Secondary-HepG2	Primary-K562	Secondary-K562	Primary-UBERON	Primary-Hela

Summary
Proteins Bound to RBP RNA

RNA Targets

eCLIP assay for KIFC1 is not avaliable on ENCORE database.

Proteins bound to RNA

KIFC1 RNA is bound by 43 proteins.

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eCLIP assay for KIFC1 is not avaliable on ENCORE database.

43 proteins are bound to KIFC1 RNA:

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Search:

Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name
chr6	33377571	33377625	+	3'-UTR	5.98021	49.17292	K562	DDX6
chr6	33373906	33374001	+	CDS,intron-Proximal	4.21253	38.61604	K562	SF3B4
chr6	33377563	33377608	+	3'-UTR	4.56239	37.77516	K562	GTF2F1
chr6	33371910	33371948	+	intron-Proximal	5.15337	35.63996	K562	AQR
chr6	33377563	33377571	+	3'-UTR	5.90878	34.71553	K562	DDX6
chr6	33373160	33373231	+	CDS	5.73151	30.88195	K562	RBM15
chr6	33377524	33377628	+	3'-UTR	3.87392	28.81528	K562	EIF4G2
chr6	33371905	33371910	+	CDS,intron-Proximal	6.47960	27.89939	K562	AQR
chr6	33371495	33371561	+	CDS,intron-Proximal	4.14275	25.36168	K562	BUD13
chr6	33366171	33366207	+	intron-Proximal	5.29783	23.49365	K562	AQR
Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name

Showing 1 to 10 of 122 entries

eCLIP assay for KIFC1 is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout assay for KIFC1 is not available on ENCORE database.
155 RBPs can affect the levels of KIFC1.

CanvasJS.com

The Knockdown/knockout RNA-Seq assay for KIFC1 is not available on ENCORE database.

155 RBPs can affect the gene expression of KIFC1 :

Show entries

Search:

Gene Name	Gene ID	KDMean	CNMean	log2(fold change) *	-log(pval) **	-log(padj) **	Cell Line	Affected by RBP	Bound by RBP
KIFC1	ENSG00000237649.3	117.33760	1464.02990	-3.64120	238.70380	235.99020	HepG2	ZNF622
KIFC1	ENSG00000237649.3	47.83600	1326.72190	-4.79360	172.67730	169.78210	HepG2	BOP1
KIFC1	ENSG00000237649.3	165.58390	1651.94850	-3.31850	169.71100	167.00100	HepG2	RBM22
KIFC1	ENSG00000237649.3	327.01700	1865.81830	-2.51240	154.27010	152.00510	HepG2	SRFBP1
KIFC1	ENSG00000237649.3	284.17120	1530.41700	-2.42910	144.67320	141.72990	HepG2	CKAP4
KIFC1	ENSG00000237649.3	125.19850	1228.54010	-3.29470	109.81020	107.15190	HepG2	RPLP0
KIFC1	ENSG00000237649.3	279.01370	1331.16590	-2.25430	104.92060	101.96650	HepG2	UPF1
KIFC1	ENSG00000237649.3	40.45670	787.94460	-4.28360	99.18530	96.25750	HepG2	EIF2S1
KIFC1	ENSG00000237649.3	162.56010	1100.32270	-2.75890	91.82380	89.22940	HepG2	RPS19
KIFC1	ENSG00000237649.3	573.98370	1976.45010	-1.78380	85.88050	83.43830	HepG2	ETF1
Gene Name	Gene ID	KDMean	CNMean	log2(fold change)	-log(pval)	-log(padj)	Cell Line	Affected by RBP	Bound by RBP

Showing 1 to 10 of 182 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

The Knockdown/knockout RNA-Seq assay for KIFC1 is not available on ENCORE database.

13 RBPs can affect the splicing of KIFC1 :

Show entries

Search:

Event Type	Gene Name	Gene ID	chr	Strand	ExonStart	ExonEnd	2ndExonStart	2ndExonEnd	upstreamES	upstreamEE	downstreamES	downstreamEE	dPSI	FDR	is_included	Cell Line	Affected by RBP
SE	KIFC1	ENSG00000237649.3	chr6	+	33372628	33373408			33371505	33371906	33373972	33374263	-0.10900	0.00030	excluded	K562	PRPF8
SE	KIFC1	ENSG00000237649.3	chr6	+	33366030	33366164			33365746	33365943	33371090	33371144	-0.06500	0.00001	excluded	K562	AQR
SE	KIFC1	ENSG00000237649.3	chr6	+	33372628	33373408			33371505	33371906	33373972	33374263	-0.10800	0.00002	excluded	K562	TARDBP
SE	KIFC1	ENSG00000237649.3	chr6	+	33372628	33373408			33371505	33371906	33373972	33374141	-0.14200	0.00000	excluded	K562	PTBP1
A5SS	KIFC1	ENSG00000237649.3	chr6	+	33374416	33374473			33374416	33374442	33374576	33374652	0.09000	0.00000	longer	K562	AQR
A5SS	KIFC1	ENSG00000237649.3	chr6	+	33374576	33374767			33374576	33374652	33377422	33377701	0.15600	0.00000	longer	K562	AQR
RI	KIFC1	ENSG00000237649.3	chr6	+	33374416	33374652			33374416	33374442	33374576	33374652	0.14700	0.00000	included	K562	AQR
MXE	KIFC1	ENSG00000237649.3	chr6	+	33365805	33365943	33366064	33366164	33359312	33359774	33371090	33371144	0.14400	0.00010	1included	K562	PUS1
MXE	KIFC1	ENSG00000237649.3	chr6	+	33365787	33365943	33366064	33366164	33359312	33359774	33371090	33371144	0.06100	0.00000	1included	K562	AQR
MXE	KIFC1	ENSG00000237649.3	chr6	+	33371090	33371144	33371261	33371312	33365805	33365943	33371505	33371906	0.05600	0.00006	1included	K562	AQR

Showing 1 to 10 of 21 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

KIFC1

General Information

Functions

Localization

Domains (AlphaFold: KIFC1)

Antibody Validation

Expression Level in Cell lines

Assays

RNA Targets

Proteins bound to RNA

eCLIP assay for KIFC1 is not avaliable on ENCORE database.

43 proteins are bound to KIFC1 RNA:

eCLIP assay for KIFC1 is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout RNA-Seq assay for KIFC1 is not available on ENCORE database.

155 RBPs can affect the gene expression of KIFC1 :

The Knockdown/knockout RNA-Seq assay for KIFC1 is not available on ENCORE database.

13 RBPs can affect the splicing of KIFC1 :

The Knockdown/knockout RNA-Seq assay for KIFC1 is not avaliable on ENCORE database.