IFITM3

General Information

Gene Name : IFITM3
Gene ID : ENSG00000142089.15
Essential Gene : No

Functions

Not Available

Localization

Not Available

Domains (AlphaFold: IFITM3)

Not Available

Antibody Validation

Not Avaiable

Expression Level in Cell lines

Cell Line	Gene Name	Ensembl ID	Rep1 TPM	Rep2 TPM	Average TPM	Experiment ID
Gm12878	IFITM3	ENSG00000142089.15	0.06	1.00	0.53	ENCSR000AEF
HepG2	IFITM3	ENSG00000142089.15	378.54	129.15	253.85	ENCSR985KAT
K562	IFITM3	ENSG00000142089.15	214.58	162.99	188.79	ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.

eCLIP

No eCLIP experiment available

Antibody Validation

No Antibody Primary Validation image or Secondary image available

KD RNA-Seq

No KD RNA-Seq experiment available

RNA Bind-n-Seqn

No RBNS experiment available

Localization Image in HepG2

No Localization Information available

RBP	Antibody Info	Primary-HepG2	Secondary-HepG2	Primary-K562	Secondary-K562	Primary-UBERON	Primary-Hela

Summary
Proteins Bound to RBP RNA

RNA Targets

eCLIP assay for IFITM3 is not avaliable on ENCORE database.

Proteins bound to RNA

IFITM3 RNA is bound by 14 proteins.

CanvasJS.com

eCLIP assay for IFITM3 is not avaliable on ENCORE database.

14 proteins are bound to IFITM3 RNA:

Show entries

Search:

Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name
chr11	320674	320729	-	CDS,intron-Distal,intron-Proximal	6.45980	400.00000	K562	LIN28B
chr11	320729	320744	-	CDS,intron-Distal,intron-Proximal	7.24710	130.68909	K562	LIN28B
chr11	320744	320760	-	3'-UTR,5'-UTR,CDS,intron-Distal,intron-Proximal	6.67429	64.82374	K562	LIN28B
chr11	319716	319828	-	3'-UTR,intron-Distal,intron-Proximal	4.34164	37.59513	HepG2	PCBP2
chr11	319724	319799	-	3'-UTR,intron-Distal,intron-Proximal	5.03450	32.11437	HepG2	LARP4
chr11	320581	320742	-	CDS,intron-Distal,intron-Proximal	4.07484	29.32964	HepG2	RPS3
chr11	320697	320729	-	CDS,intron-Distal,intron-Proximal	5.07197	23.75695	HepG2	LIN28B
chr11	320729	320771	-	3'-UTR,5'-UTR,CDS,intron-Distal,intron-Proximal	4.79991	20.05754	HepG2	LIN28B
chr11	320760	320782	-	3'-UTR,5'-UTR,CDS,intron-Distal,intron-Proximal	4.80372	18.47346	K562	LIN28B
chr11	319739	319791	-	3'-UTR,intron-Distal,intron-Proximal	3.90742	17.97253	K562	PABPC4
Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name

Showing 1 to 10 of 31 entries

eCLIP assay for IFITM3 is not avaliable on ENCORE database.

Summary
DE Affected by

Diffrential Expression

The Knockdown/knockout assay for IFITM3 is not available on ENCORE database.
151 RBPs can affect the levels of IFITM3.

CanvasJS.com

The Knockdown/knockout RNA-Seq assay for IFITM3 is not available on ENCORE database.

151 RBPs can affect the gene expression of IFITM3 :

Show entries

Search:

Gene Name	Gene ID	KDMean	CNMean	log2(fold change) *	-log(pval) **	-log(padj) **	Cell Line	Affected by RBP	Bound by RBP
IFITM3	ENSG00000142089.11	544.79510	1602.56360	-1.55660	71.79130	68.93040	K562	WDR43
IFITM3	ENSG00000142089.11	812.21500	2744.41720	-1.75660	67.71770	66.04640	HepG2	SSB
IFITM3	ENSG00000142089.11	853.28730	2228.91710	-1.38520	61.91010	59.30610	HepG2	PRPF4
IFITM3	ENSG00000142089.11	4433.42270	2270.11270	0.96560	61.25940	58.70790	HepG2	HNRNPL
IFITM3	ENSG00000142089.11	3959.82040	1890.56060	1.06650	51.20100	49.41110	HepG2	SRSF9
IFITM3	ENSG00000142089.11	6692.41610	1963.61910	1.76890	45.73880	43.67180	HepG2	DDX6
IFITM3	ENSG00000142089.11	3901.90480	1495.27820	1.38370	43.68120	41.78860	HepG2	TRIM56
IFITM3	ENSG00000142089.11	495.56030	1264.12990	-1.35100	39.53940	37.40680	K562	FXR1
IFITM3	ENSG00000142089.11	4168.93030	2504.35350	0.73510	37.47820	35.80370	HepG2	PUM1
IFITM3	ENSG00000142089.11	2673.56700	1355.09600	0.98030	37.02670	34.89500	HepG2	DNAJC2
Gene Name	Gene ID	KDMean	CNMean	log2(fold change)	-log(pval)	-log(padj)	Cell Line	Affected by RBP	Bound by RBP

Showing 1 to 10 of 188 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

IFITM3

General Information

Functions

Localization

Domains (AlphaFold: IFITM3)

Antibody Validation

Expression Level in Cell lines

Assays

RNA Targets

Proteins bound to RNA

eCLIP assay for IFITM3 is not avaliable on ENCORE database.

14 proteins are bound to IFITM3 RNA:

eCLIP assay for IFITM3 is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout RNA-Seq assay for IFITM3 is not available on ENCORE database.

151 RBPs can affect the gene expression of IFITM3 :

The Knockdown/knockout RNA-Seq assay for IFITM3 is not available on ENCORE database.

No RBPs affect the alternative splcing events of IFITM3 on ENCORE database.

The Knockdown/knockout RNA-Seq assay for IFITM3 is not avaliable on ENCORE database.