BPIFB2

General Information

Gene Name : BPIFB2
Gene ID : ENSG00000078898.6
Essential Gene : No

Functions

Not Available

Localization

Not Available

Domains (AlphaFold: BPIFB2)

Not Available

Antibody Validation

Not Avaiable

Expression Level in Cell lines

Cell Line	Gene Name	Ensembl ID	Rep1 TPM	Rep2 TPM	Average TPM	Experiment ID
Gm12878	BPIFB2	ENSG00000078898.6	0.00	0.00	0.00	ENCSR000AEF
HepG2	BPIFB2	ENSG00000078898.6	225.57	98.00	161.78	ENCSR985KAT
K562	BPIFB2	ENSG00000078898.6	0.00	0.00	0.00	ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.

eCLIP

No eCLIP experiment available

Antibody Validation

No Antibody Primary Validation image or Secondary image available

KD RNA-Seq

No KD RNA-Seq experiment available

RNA Bind-n-Seqn

No RBNS experiment available

Localization Image in HepG2

No Localization Information available

RBP	Antibody Info	Primary-HepG2	Secondary-HepG2	Primary-K562	Secondary-K562	Primary-UBERON	Primary-Hela

Summary
Proteins Bound to RBP RNA

RNA Targets

eCLIP assay for BPIFB2 is not avaliable on ENCORE database.

Proteins bound to RNA

BPIFB2 RNA is bound by 36 proteins.

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eCLIP assay for BPIFB2 is not avaliable on ENCORE database.

36 proteins are bound to BPIFB2 RNA:

Show entries

Search:

Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name
chr20	31611381	31611415	+	3'-UTR	4.28875	400.00000	HepG2	HNRNPK
chr20	31611369	31611427	+	3'-UTR	4.25416	400.00000	HepG2	ILF3
chr20	31611409	31611413	+	3'-UTR	6.65899	400.00000	HepG2	PCBP2
chr20	31611413	31611417	+	3'-UTR	6.65436	400.00000	HepG2	PCBP2
chr20	31611417	31611424	+	3'-UTR	6.46281	400.00000	HepG2	PCBP2
chr20	31611415	31611461	+	3'-UTR	6.31213	400.00000	HepG2	PCBP1
chr20	31611422	31611460	+	3'-UTR	3.01581	400.00000	HepG2	DDX59
chr20	31611367	31611402	+	3'-UTR	6.38025	400.00000	HepG2	PCBP2
chr20	31611329	31611367	+	3'-UTR	4.93621	400.00000	HepG2	PCBP2
chr20	31611415	31611473	+	3'-UTR	4.39504	400.00000	HepG2	HNRNPK
Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name

Showing 1 to 10 of 218 entries

eCLIP assay for BPIFB2 is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout assay for BPIFB2 is not available on ENCORE database.
136 RBPs can affect the levels of BPIFB2.

CanvasJS.com

The Knockdown/knockout RNA-Seq assay for BPIFB2 is not available on ENCORE database.

136 RBPs can affect the gene expression of BPIFB2 :

Show entries

Search:

Gene Name	Gene ID	KDMean	CNMean	log2(fold change) *	-log(pval) **	-log(padj) **	Cell Line	Affected by RBP	Bound by RBP
BPIFB2	ENSG00000078898.6	1443.82880	14243.55930	-3.30230	99999.99999	99999.99999	HepG2	RBM22
BPIFB2	ENSG00000078898.6	3495.17010	25108.92490	-2.84480	99999.99999	99999.99999	HepG2	NELFE
BPIFB2	ENSG00000078898.6	767.13810	24517.81280	-4.99820	99999.99999	99999.99999	HepG2	SRSF1
BPIFB2	ENSG00000078898.6	1286.22990	13967.33970	-3.44080	99999.99999	99999.99999	HepG2	SSB
BPIFB2	ENSG00000078898.6	4372.03340	16087.39050	-1.87960	248.00410	245.22340	HepG2	SRFBP1
BPIFB2	ENSG00000078898.6	1268.01590	7222.60870	-2.50990	142.65770	139.73740	HepG2	HNRNPA1
BPIFB2	ENSG00000078898.6	1848.02780	7754.77090	-2.06910	133.99170	131.51150	HepG2	TIAL1
BPIFB2	ENSG00000078898.6	3436.43740	8667.11160	-1.33460	129.09150	126.10650	HepG2	ZC3H8
BPIFB2	ENSG00000078898.6	9020.74420	23386.50890	-1.37440	126.43180	123.64950	HepG2	RECQL
BPIFB2	ENSG00000078898.6	27138.94730	12904.22710	1.07240	114.28770	111.42710	HepG2	SLBP
Gene Name	Gene ID	KDMean	CNMean	log2(fold change)	-log(pval)	-log(padj)	Cell Line	Affected by RBP	Bound by RBP

Showing 1 to 10 of 139 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

The Knockdown/knockout RNA-Seq assay for BPIFB2 is not available on ENCORE database.

67 RBPs can affect the splicing of BPIFB2 :

Show entries

Search:

Event Type	Gene Name	Gene ID	chr	Strand	ExonStart	ExonEnd	upstreamES	upstreamEE	downstreamES	downstreamEE	dPSI	FDR	is_included	Cell Line	Affected by RBP
SE	BPIFB2	ENSG00000078898.6	chr20	+	31596005	31596184	31595405	31595566	31596346	31596489	-0.06300	0.00001	excluded	HepG2	G3BP1
SE	BPIFB2	ENSG00000078898.6	chr20	+	31596005	31596184	31595405	31595566	31596346	31596489	-0.10700	0.00000	excluded	HepG2	NKRF
SE	BPIFB2	ENSG00000078898.6	chr20	+	31596005	31596184	31595405	31595566	31596346	31596489	-0.09300	0.00000	excluded	HepG2	RBM22
SE	BPIFB2	ENSG00000078898.6	chr20	+	31596005	31596184	31595405	31595566	31596346	31596489	-0.08100	0.00026	excluded	HepG2	IGF2BP1
SE	BPIFB2	ENSG00000078898.6	chr20	+	31596005	31596184	31595405	31595566	31596346	31596489	-0.18200	0.00024	excluded	HepG2	CSTF2
SE	BPIFB2	ENSG00000078898.6	chr20	+	31606867	31606921	31606442	31606628	31607385	31607556	-0.19500	0.00000	excluded	HepG2	U2AF1
SE	BPIFB2	ENSG00000078898.6	chr20	+	31596005	31596184	31595405	31595566	31596346	31596489	-0.08700	0.00000	excluded	HepG2	U2AF1
SE	BPIFB2	ENSG00000078898.6	chr20	+	31596005	31596184	31595405	31595566	31596346	31596489	-0.17800	0.00096	excluded	HepG2	PRPF8
SE	BPIFB2	ENSG00000078898.6	chr20	+	31596005	31596184	31595405	31595566	31596346	31596489	-0.25100	0.00346	excluded	HepG2	DHX30
SE	BPIFB2	ENSG00000078898.6	chr20	+	31596005	31596184	31595405	31595566	31596346	31596489	-0.06500	0.00000	excluded	HepG2	HNRNPM

Showing 1 to 10 of 169 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

BPIFB2

General Information

Functions

Localization

Domains (AlphaFold: BPIFB2)

Antibody Validation

Expression Level in Cell lines

Assays

RNA Targets

Proteins bound to RNA

eCLIP assay for BPIFB2 is not avaliable on ENCORE database.

36 proteins are bound to BPIFB2 RNA:

eCLIP assay for BPIFB2 is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout RNA-Seq assay for BPIFB2 is not available on ENCORE database.

136 RBPs can affect the gene expression of BPIFB2 :

The Knockdown/knockout RNA-Seq assay for BPIFB2 is not available on ENCORE database.

67 RBPs can affect the splicing of BPIFB2 :

The Knockdown/knockout RNA-Seq assay for BPIFB2 is not avaliable on ENCORE database.