ALYREF

General Information

Gene Name       : ALYREF
Gene ID             : ENSG00000183684.7
Essential Gene : Yes

Functions

Localization(RBPImage: ALYREF)

Domains (AlphaFold: ALYREF)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878ALYREFENSG00000183684.718.5971.3244.95ENCSR000AEF
HepG2ALYREFENSG00000183684.7218.23128.95173.59ENCSR985KAT
K562ALYREFENSG00000183684.7111.2899.12105.20ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  
  GeneName    Antibody_DCC_ID    Product_ID    Lot_ID    Phosphate    HepG2 Primary Validation    K562 Primary Validation    HepG2 Secondary Validation    K562 Secondary Validation  
ALYREF12655S1Submitted, ENCORE2BGHcLV45-5, Experimented, ENCORE2BGKcLV44-3, Submitting, ENCORE2


  KD RNA-Seq  
  GeneName    Cell_Line    Method    Exp_ID    Control_ID    Sample_reps    Control_reps    KD%    Status    Project    Note  
ALYREFK562shRNABGKLV29-7,BGKLV29-8BGKLV29-1,BGKLV29-2NotSatisfiedENCODE3
ALYREFHepG2shRNABGHLV30-7,BGHLV30-8BGHLV30-1,BGHLV30-2NotSatisfiedENCODE3
ALYREFK562CRISPRBGKcLV42-5,BGKcLV42-6BGKcLV42-1,BGKcLV42-20.0,6.0NotSatisfiedENCORE2
ALYREFK562CRISPRALYREF-BGKcLV44-3,ALYREF-BGKcLV44-4NT-BGKcLV44-1,NT-BGKcLV44-261.9,70.0SequencedENCORE2
ALYREFHepG2CRISPRBGHcLV45-5,BGHcLV45-6BGHcLV45-1,BGHcLV45-254.2,62.5SequencingENCORE2


  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  
    ALYREF: Click to RBP Image Database
  • Nuclei
  • Mutually Exclusive from Nucleolus
  • Speckles
  • Nuclear release mitosis












    • RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela
    ALYREFProduct_ID: 12655S
    Lot_ID: 1
    Source: Cell Signaling Technology
    Target Name: ALYREF-human    		 ALYREF-HEPG2-CRISPR-12655S.png<br>Caption: Western blot following CRISPR against ALYREF in HepG2 whole cell lysate using ALYREF specific antibody. Lane 1 is a ladder, lane 2 is HepG2 non-targeting control knockdown, lane 3 and 4 are two different CRISPR against ALYREF. ALYREF protein appears as the green arrow, Beta-actin serves as a control and appears in red arrow.
    		 CST_12655S_1_ALYREF.png<br>Caption: IP-WB analysis of 12655S whole cell lysate using the ALYREF specific antibody, 12655S. Lanes 1 and 2 are 2.5% of five million whole cell lysate input and 50% of IP enrichment, respectively, using a normal IgG antibody. Lane 3 is 50% of IP enrichment from five million whole cell lysate using the ALYREF-specific antibody, 12655S. The same antibody was used to detect protein levels via Western blot. This antibody passes preliminary validation and will be further pursued for secondary validation. *NOTE* Protein sizes are taken from Genecards.org and are only estimates based on sequence. Actual protein size may differ based on protein characteristics and electrophoresis method used.
    		 ALYREF-K562-CRISPR-12655S.png<br>Caption: Western blot following CRISPR against ALYREF in K562 whole cell lysate using ALYREF specific antibody. Lane 1 is a ladder, lane 2 is K562 non-targeting control knockdown, lane 3 and 4 are two different CRISPR against ALYREF. ALYREF protein appears as the green arrow, Beta-actin serves as a control and appears in red arrow.








    RNA Targets

    • eCLIP assay for ALYREF is not avaliable on ENCORE database.



    Proteins bound to RNA
    • ALYREF RNA is bound by 23 proteins.  







    eCLIP assay for ALYREF is not avaliable on ENCORE database.





    23 proteins are bound to ALYREF RNA:

    Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
    chr177984575179845786-3'-UTR,intron-Distal4.1141513.23277K562ZC3H11A
    chr177984596579846002-3'-UTR,intron-Distal3.678785.15615HepG2RPS3
    chr177984578179845827-3'-UTR,intron-Distal3.421377.62465K562TIA1
    chr177984578979845832-3'-UTR,intron-Distal4.788406.88705HepG2SUB1
    chr177984574879845789-3'-UTR,intron-Distal5.59828400.00000K562PABPC4
    chr177984574379845789-3'-UTR,intron-Distal4.6850211.81456HepG2SUB1
    chr177984573379845745-3'-UTR,intron-Distal3.2466017.11041K562TIA1
    chr177984578579845839-3'-UTR,intron-Distal3.048933.46936K562HNRNPC
    chr177984574579845833-3'-UTR,intron-Distal4.217143.82357HepG2TIAL1
    chr177984578779845833-3'-UTR,intron-Distal3.268567.46444HepG2DDX55
    chr177984578879845834-3'-UTR,intron-Distal4.0343819.54734K562ZC3H11A
    chr177984594679846008-3'-UTR,intron-Distal4.018716.07797HepG2LARP4
    chr177984578979845833-3'-UTR,intron-Distal3.9125512.45146HepG2LARP4
    chr177984574279845786-3'-UTR,intron-Distal3.849638.17836HepG2DDX55
    chr177984579379845839-3'-UTR,intron-Distal4.1543758.25059K562PABPC4
    chr177984940179849460-5'-UTR,CDS,intron-Distal3.9560019.03300K562DDX3X
    chr177984620479846251-CDS,intron-Distal,intron-Proximal4.523584.15208K562RBM15
    chr177984702079847060-CDS,intron-Distal,intron-Proximal3.463793.96535HepG2AQR
    chr177984619279846241-CDS,intron-Distal,intron-Proximal3.202325.71803K562UCHL5
    chr177984640379846491-CDS,intron-Distal,intron-Proximal3.735957.17852HepG2AQR
    chr177984859179848659-CDS,intron-Distal3.8487514.91304K562RPS3
    chr177984938679849398-CDS,intron-Distal3.8332211.16044K562YBX3
    chr177984640179846440-CDS,intron-Distal3.318435.30095HepG2PPIG
    chr177984923879849294-CDS,intron-Distal,intron-Proximal3.7464411.77523HepG2RPS3
    chr177984640579846451-CDS,intron-Distal4.419384.54659HepG2G3BP1
    chr177984935479849367-CDS,intron-Distal,intron-Proximal3.144917.54844K562YBX3
    chr177984642479846448-CDS,intron-Distal3.096658.19758K562YBX3
    chr177984620379846267-CDS,intron-Distal,intron-Proximal3.7598510.94020K562FMR1
    chr177984856679848594-CDS,intron-Distal3.070784.39623HepG2PPIG
    chr177984931179849387-CDS,intron-Distal,intron-Proximal3.2558813.88592HepG2RPS3
    chr177984643879846474-CDS,intron-Distal,intron-Proximal4.363373.79000HepG2U2AF2
    chr177984641679846472-CDS,intron-Distal,intron-Proximal3.411508.03987K562BUD13
    chr177984702179847059-CDS,intron-Distal,intron-Proximal3.000723.39147HepG2EFTUD2
    chr177984866879848688-CDS,intron-Distal4.705587.64008K562YBX3
    chr177984852279848568-CDS,intron-Distal,intron-Proximal4.8116812.86643K562AQR
    chr177984700979847072-CDS,intron-Distal,intron-Proximal5.1760315.79030HepG2PRPF8
    chr177984611779846176-CDS,intron-Distal,intron-Proximal3.026307.04888K562UCHL5
    chr177984936779849386-CDS,intron-Distal,intron-Proximal4.0209912.72862K562YBX3
    chr177984930979849401-CDS,intron-Distal,intron-Proximal3.2194214.32876K562DDX3X
    chr177984700979847061-CDS,intron-Distal,intron-Proximal3.9775411.81659K562AQR
    chr177984640179846424-CDS,intron-Distal3.570038.07578K562YBX3
    chr177984695779847035-intron-Distal,intron-Proximal4.508068.48965K562EFTUD2
    chr177984843479848534-intron-Distal,intron-Proximal3.944825.35561K562RBM22
    chr177984911779849158-intron-Distal3.773295.29272K562BUD13
    chr177984850879848541-intron-Distal,intron-Proximal4.364994.35676HepG2PRPF8
    chr177984915479849171-intron-Distal4.442345.97994K562AQR
    chr177984689279846956-intron-Distal,intron-Proximal6.1160714.50093K562AQR
    chr177984687779846932-intron-Distal,intron-Proximal4.275117.80986K562PRPF8
    chr177984898479849029-intron-Distal3.878394.93376K562PRPF8
    chr177984604579846098-intron-Distal,intron-Proximal4.185544.19412K562EFTUD2
    chr177984912279849185-intron-Distal4.022745.73990HepG2PRPF8
    chr177984629779846367-intron-Distal,intron-Proximal4.819285.95597K562EFTUD2
    chr177984697579847007-intron-Distal,intron-Proximal4.184653.67772HepG2EFTUD2
    chr177984918779849198-intron-Distal5.395796.75320K562AQR
    chr177984845979848534-intron-Distal,intron-Proximal3.563208.10412K562PRPF8
    chr177984917179849187-intron-Distal5.395796.75320K562AQR
    chr177984849679848522-intron-Distal,intron-Proximal5.708598.88118K562AQR
    chr177984607679846117-intron-Distal,intron-Proximal4.6926211.83008HepG2PRPF8
    chr177984846379848536-intron-Distal,intron-Proximal5.6859710.66862HepG2RBM22
    chr177984697179847038-intron-Distal,intron-Proximal5.3608410.26421K562BUD13
    chr177984844779848496-intron-Distal,intron-Proximal5.292566.75320K562AQR
    chr177984912379849155-intron-Distal5.024574.47382K562EFTUD2
    chr177984646179846483-intron-Distal,intron-Proximal3.818085.64484HepG2PRPF8
    chr177984630079846348-intron-Distal,intron-Proximal3.989503.56713HepG2SF3B4
    ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




    eCLIP assay for ALYREF is not avaliable on ENCORE database.



    Diffrential Expression

    • The Knockdown/knockout assay for ALYREF is not available on ENCORE database.

    • 146 RBPs can affect the levels of ALYREF.  








    The Knockdown/knockout RNA-Seq assay for ALYREF is not available on ENCORE database.





    146 RBPs can affect the gene expression of ALYREF :

    Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
    ALYREFENSG00000183684.6453.41280665.83470-0.554304.457503.12610HepG2AATF
    ALYREFENSG00000183684.61351.532301074.653100.330604.351903.62250HepG2ACO1
    ALYREFENSG00000183684.61118.14230832.358100.425702.538602.02730HepG2AKAP1
    ALYREFENSG00000183684.6758.561801079.61940-0.509207.341306.15800HepG2AKAP8L
    ALYREFENSG00000183684.6417.68900688.65890-0.721406.192605.03890HepG2ASCC1
    ALYREFENSG00000183684.6950.055301486.43900-0.6458012.7679011.48500HepG2AUH
    ALYREFENSG00000183684.6515.88290965.84740-0.904804.984003.80850HepG2BCLAF1
    ALYREFENSG00000183684.61035.941401316.03690-0.345302.660202.07220HepG2BOP1
    ALYREFENSG00000183684.6541.39370922.05000-0.768207.439806.25710HepG2CALR
    ALYREFENSG00000183684.61376.889002002.35970-0.540304.067902.87300HepG2CCAR1
    ALYREFENSG00000183684.6540.04500339.721700.668603.429702.57100HepG2CNOT7
    ALYREFENSG00000183684.6947.117701208.18450-0.351202.509001.84850HepG2CPSF6
    ALYREFENSG00000183684.61106.51400802.661900.463102.674401.67560HepG2YBX3
    ALYREFENSG00000183684.6429.51170681.76970-0.666604.370902.51900HepG2CSTF2T
    ALYREFENSG00000183684.61145.620901441.40390-0.331304.628103.70710HepG2DAZAP1
    ALYREFENSG00000183684.6616.86120803.76980-0.381803.313002.04780HepG2DDX1
    ALYREFENSG00000183684.6437.09260734.54130-0.748908.040306.94590HepG2DDX21
    ALYREFENSG00000183684.6405.83850718.86840-0.8248010.059008.36960HepG2DDX24
    ALYREFENSG00000183684.6546.00820797.23390-0.546104.026303.28310HepG2DDX3X
    ALYREFENSG00000183684.6330.50970475.86120-0.525803.432501.98910HepG2DDX47
    ALYREFENSG00000183684.6615.907101093.17960-0.827704.935503.93870HepG2DDX55
    ALYREFENSG00000183684.6856.234701371.98530-0.680203.775902.64020HepG2DDX59
    ALYREFENSG00000183684.6851.398701083.96830-0.348402.459601.50350HepG2DDX5
    ALYREFENSG00000183684.6367.55590685.08100-0.898307.929206.93490HepG2DDX6
    ALYREFENSG00000183684.6489.81780760.16320-0.634106.222404.79390HepG2DHX30
    ALYREFENSG00000183684.6753.286401028.12610-0.448705.081304.21370HepG2DKC1
    ALYREFENSG00000183684.6660.66470781.20200-0.241802.041301.46450HepG2DNAJC2
    ALYREFENSG00000183684.61318.51890926.100800.509604.291003.16630HepG2EEF2
    ALYREFENSG00000183684.6258.94470676.45830-1.3854016.1324013.71820HepG2AGO1
    ALYREFENSG00000183684.6465.35870658.34620-0.500502.605802.03040HepG2EIF2S1
    ALYREFENSG00000183684.6481.87230751.69560-0.641505.492804.25020HepG2EIF3D
    ALYREFENSG00000183684.6937.91720708.480000.404601.957801.37230HepG2EIF4B
    ALYREFENSG00000183684.6881.176101422.14550-0.6906013.6699012.09160HepG2EIF4G1
    ALYREFENSG00000183684.6867.813001362.30430-0.650607.377606.07610HepG2EIF4G2
    ALYREFENSG00000183684.6935.945901215.23660-0.376703.059701.91430HepG2ESF1
    ALYREFENSG00000183684.61492.422701706.60320-0.193501.848101.33590HepG2ETF1
    ALYREFENSG00000183684.6898.550201416.68340-0.656806.044204.94920HepG2FIP1L1
    ALYREFENSG00000183684.6549.475901210.27420-1.139206.185304.67010HepG2FTO
    ALYREFENSG00000183684.61397.33080734.300400.9281012.4890011.12460HepG2FXR1
    ALYREFENSG00000183684.6458.22700680.98740-0.571603.532102.78500HepG2G3BP1
    ALYREFENSG00000183684.6862.88140669.260600.366502.185901.39590HepG2GEMIN5
    ALYREFENSG00000183684.6300.569501369.54650-2.1879049.9111047.59730HepG2GPKOW
    ALYREFENSG00000183684.6639.542601025.92570-0.6818012.4825010.64910HepG2HDGF
    ALYREFENSG00000183684.6601.14840795.68770-0.404502.790802.14120HepG2HNRNPA1
    ALYREFENSG00000183684.6826.272601324.75420-0.681006.947105.58370HepG2HNRNPA2B1
    ALYREFENSG00000183684.61107.338801531.01830-0.467407.241006.15220HepG2HNRNPF
    ALYREFENSG00000183684.6936.71550689.990600.440903.241902.48660HepG2HNRNPK
    ALYREFENSG00000183684.6577.769201306.98570-1.1777019.3660017.92720HepG2HNRNPLL
    ALYREFENSG00000183684.61013.987501507.62600-0.572207.597506.45380HepG2IGF2BP1
    ALYREFENSG00000183684.6762.85840898.08410-0.235402.267301.59500HepG2ILF2
    ALYREFENSG00000183684.6530.73460982.30580-0.8882021.0169018.58670HepG2KIF1C
    ALYREFENSG00000183684.6985.71350734.558300.424202.797302.13890HepG2MAGOH
    ALYREFENSG00000183684.61153.92080738.612700.643605.406404.54900HepG2MATR3
    ALYREFENSG00000183684.6760.929901146.35540-0.591207.118705.87910HepG2MSI2
    ALYREFENSG00000183684.6580.280001333.00970-1.1999011.966609.93820HepG2MTPAP
    ALYREFENSG00000183684.6745.41660477.866900.641303.993202.28060HepG2NKRF
    ALYREFENSG00000183684.6686.479601004.29640-0.548902.493501.46060HepG2NONO
    ALYREFENSG00000183684.6615.246801158.91080-0.9135012.2225010.75750HepG2NSUN2
    ALYREFENSG00000183684.6167.99940673.02380-2.0022026.8912024.70950HepG2PABPC4
    ALYREFENSG00000183684.6863.74910722.414600.257702.196701.64520HepG2PCBP1
    ALYREFENSG00000183684.6603.67540842.79520-0.481402.524701.75170HepG2PRPF8
    ALYREFENSG00000183684.61043.142501364.42810-0.387401.910201.40170HepG2PUF60
    ALYREFENSG00000183684.61633.171901448.442800.173101.950901.43500HepG2PUM1
    ALYREFENSG00000183684.6796.358001094.58940-0.458906.736805.84760HepG2PUS1
    ALYREFENSG00000183684.6481.98200796.06910-0.723908.873107.85200HepG2QKI
    ALYREFENSG00000183684.6881.110801478.07500-0.7463013.6839012.00090HepG2RBM15
    ALYREFENSG00000183684.61287.00670818.089800.6536011.7547010.78850HepG2NELFE
    ALYREFENSG00000183684.6897.56130762.004000.236101.887201.36500HepG2RECQL
    ALYREFENSG00000183684.6613.351101649.13150-1.4269033.0787031.31130HepG2RPLP0
    ALYREFENSG00000183684.6479.35610731.52550-0.609806.090105.21850HepG2RPS19
    ALYREFENSG00000183684.61150.53360867.681000.407002.726501.66070HepG2RPS5
    ALYREFENSG00000183684.6533.79870833.64940-0.643103.755102.85690HepG2RRP9
    ALYREFENSG00000183684.6499.71950734.05330-0.554804.540803.35110HepG2SERBP1
    ALYREFENSG00000183684.62533.425401331.535700.927904.493003.62240HepG2SF3A3
    ALYREFENSG00000183684.6832.070801293.64340-0.636707.173406.08370HepG2SF3B1
    ALYREFENSG00000183684.6988.44150765.285000.369103.899403.21770HepG2SF3B4
    ALYREFENSG00000183684.61077.535801308.36040-0.280003.129702.39100HepG2SLBP
    ALYREFENSG00000183684.61331.38250913.069500.5440011.104909.95260HepG2SMN1
    ALYREFENSG00000183684.6962.532101439.41020-0.580603.550302.66080HepG2SNRNP70
    ALYREFENSG00000183684.61319.87210798.823100.7244015.1579014.24130HepG2SRSF1
    ALYREFENSG00000183684.6926.450701504.14020-0.6992014.8358013.44700HepG2SRSF7
    ALYREFENSG00000183684.6509.52550649.91220-0.351102.665202.12130HepG2SRSF9
    ALYREFENSG00000183684.6971.625701398.82380-0.525709.307508.47460HepG2SSB
    ALYREFENSG00000183684.6652.69330946.05310-0.535504.170002.67610HepG2STAU1
    ALYREFENSG00000183684.61782.218601532.122100.218002.720202.10260HepG2SUCLG1
    ALYREFENSG00000183684.6684.69050956.42760-0.482204.550003.35920HepG2SUPT6H
    ALYREFENSG00000183684.6429.255701088.09710-1.341909.461508.33660HepG2SUPV3L1
    ALYREFENSG00000183684.6485.06330718.10030-0.566004.555503.86380HepG2TAF15
    ALYREFENSG00000183684.6476.104301273.97210-1.4200028.7510026.88300HepG2TARDBP
    ALYREFENSG00000183684.6446.43120729.22420-0.707904.429603.21150HepG2TFIP11
    ALYREFENSG00000183684.6406.54220659.74410-0.698507.576006.20790HepG2TIA1
    ALYREFENSG00000183684.6712.13530854.28760-0.262601.819401.39640HepG2TIAL1
    ALYREFENSG00000183684.6623.21600861.95730-0.467905.785105.02340HepG2TRIM56
    ALYREFENSG00000183684.6998.545301211.75780-0.279201.875601.34750HepG2U2AF1
    ALYREFENSG00000183684.6675.024201180.86990-0.8068018.1720016.68530HepG2UPF1
    ALYREFENSG00000183684.6977.716101213.75890-0.312002.303901.33350HepG2UTP18
    ALYREFENSG00000183684.61484.048501140.081400.380305.571304.76970HepG2UTP3
    ALYREFENSG00000183684.6821.791101298.72900-0.6603015.6258014.59120HepG2ZNF622
    ALYREFENSG00000183684.61912.584901555.305200.298202.437101.33660K562AARS
    ALYREFENSG00000183684.61346.826002056.32600-0.610504.903503.25370K562ABCF1
    ALYREFENSG00000183684.61798.034301531.430800.231402.512501.96720K562AGGF1
    ALYREFENSG00000183684.61916.001001593.523700.265802.032501.46970K562AKAP8L
    ALYREFENSG00000183684.62002.487701671.990800.260102.747601.83750K562ATP5C1
    ALYREFENSG00000183684.6509.48090849.27590-0.737207.375105.92670K562BOP1
    ALYREFENSG00000183684.6625.00850861.51090-0.463003.440802.23910K562CCAR1
    ALYREFENSG00000183684.6626.47230903.01410-0.527505.387504.30150K562CPSF6
    ALYREFENSG00000183684.62560.892103418.77010-0.416805.952404.52760K562CELF1
    ALYREFENSG00000183684.62183.328101714.742800.348402.521901.69000K562DKC1
    ALYREFENSG00000183684.61536.036501085.860100.500303.138201.76770K562EEF2
    ALYREFENSG00000183684.61397.628601048.928700.414003.014902.06200K562EFTUD2
    ALYREFENSG00000183684.61785.573502178.54880-0.287003.487102.69480K562EIF2S2
    ALYREFENSG00000183684.6952.68380607.410000.649208.487307.09840K562EIF3G
    ALYREFENSG00000183684.6948.968301571.36010-0.727606.739704.11460K562ESF1
    ALYREFENSG00000183684.6996.048401477.47550-0.568805.380403.71340K562FKBP4
    ALYREFENSG00000183684.6491.07050918.81440-0.9038011.405609.60280K562FMR1
    ALYREFENSG00000183684.6486.95800778.78640-0.677406.081104.66860K562FTO
    ALYREFENSG00000183684.6404.19900536.98350-0.409803.033101.62200K562FUS
    ALYREFENSG00000183684.61996.450101073.898400.8945021.5588019.97990K562FXR1
    ALYREFENSG00000183684.679.07810399.09970-2.3354012.4184010.69390K562G3BP2
    ALYREFENSG00000183684.61411.366601929.11600-0.450806.654804.93240K562GLRX3
    ALYREFENSG00000183684.6595.63930862.14830-0.533504.830103.78490K562GPKOW
    ALYREFENSG00000183684.62250.122202903.04390-0.367604.023403.11530K562GRSF1
    ALYREFENSG00000183684.61139.184802293.20620-1.009404.418302.42200K562HNRNPAB
    ALYREFENSG00000183684.61029.264001701.83120-0.7255011.5409010.39460K562HNRNPC
    ALYREFENSG00000183684.61128.138201519.73090-0.429904.266602.81300K562HNRNPF
    ALYREFENSG00000183684.61809.347901215.578300.573705.352604.00490K562HNRNPM
    ALYREFENSG00000183684.61591.941602003.96970-0.332102.120101.42040K562HSPD1
    ALYREFENSG00000183684.61105.392402235.52070-1.016104.066302.32570K562ILF2
    ALYREFENSG00000183684.6423.17020736.18780-0.798805.992204.55990K562KRR1
    ALYREFENSG00000183684.61259.868401647.98490-0.387403.605801.96950K562LARP7
    ALYREFENSG00000183684.61355.49610874.277900.632608.477906.96610K562MAGOH
    ALYREFENSG00000183684.61137.03320872.425200.382103.468702.42020K562MATR3
    ALYREFENSG00000183684.62423.941101894.487700.355403.610702.55060K562MBNL1
    ALYREFENSG00000183684.6625.66490841.55630-0.427703.248402.29800K562METAP2
    ALYREFENSG00000183684.62128.326902963.73400-0.477705.225803.68120K562MSI2
    ALYREFENSG00000183684.61291.303102028.22420-0.6514016.3939014.64550K562MTPAP
    ALYREFENSG00000183684.61753.735901327.898800.401202.456201.63650K562NAA15
    ALYREFENSG00000183684.61448.318902253.48120-0.6378022.0801020.26980K562NSUN2
    ALYREFENSG00000183684.61225.362002354.68030-0.942303.676902.23240K562PABPC1
    ALYREFENSG00000183684.61208.05430854.849400.498805.740703.72150K562PCBP1
    ALYREFENSG00000183684.61179.70010777.795900.600906.867105.30180K562PCBP2
    ALYREFENSG00000183684.6909.001701341.99420-0.562005.010003.89090K562PCBP3
    ALYREFENSG00000183684.61269.982901661.51060-0.387703.504001.87030K562PHF6
    ALYREFENSG00000183684.6763.668001029.37890-0.430804.139603.15660K562POLR2G
    ALYREFENSG00000183684.61262.336002179.67740-0.788003.315701.34310K562PPIL4
    ALYREFENSG00000183684.61771.189201020.738100.7950010.607409.12830K562PRPF8
    ALYREFENSG00000183684.61002.394101525.86820-0.606207.088405.52310K562PSIP1
    ALYREFENSG00000183684.61067.50910849.454600.329502.363201.74200K562PTBP1
    ALYREFENSG00000183684.62318.537603161.67510-0.447507.995106.33740K562PUM2
    ALYREFENSG00000183684.62012.779701580.335200.348902.625802.09350K562PUS1
    ALYREFENSG00000183684.62220.214701539.801100.527904.133703.42490K562RBM15
    ALYREFENSG00000183684.61410.85120814.241500.7929011.602409.70720K562RBM22
    ALYREFENSG00000183684.61064.41590793.947500.422803.053301.57020K562RBM34
    ALYREFENSG00000183684.6841.079301392.14810-0.7270011.331509.29930K562RCC2
    ALYREFENSG00000183684.61224.08260917.127200.416403.860602.57140K562SAFB
    ALYREFENSG00000183684.61594.314602223.69720-0.480005.743904.60110K562SF3A3
    ALYREFENSG00000183684.6561.20210819.96240-0.547003.852902.69270K562SF3B1
    ALYREFENSG00000183684.6666.26160414.548000.684406.899005.51350K562SF3B4
    ALYREFENSG00000183684.6658.56230948.95630-0.527004.796703.09850K562SLBP
    ALYREFENSG00000183684.6328.58100557.76550-0.763407.538404.40790K562SND1
    ALYREFENSG00000183684.61030.492301319.72010-0.356902.815901.78010K562SRFBP1
    ALYREFENSG00000183684.61778.966002278.23360-0.356906.711405.32440K562SRPK2
    ALYREFENSG00000183684.61422.31680832.807100.7721012.5134011.00770K562SRSF1
    ALYREFENSG00000183684.6488.00920626.54250-0.360502.538401.31600K562SSB
    ALYREFENSG00000183684.61470.741701939.35210-0.399002.746801.39510K562SSRP1
    ALYREFENSG00000183684.61116.934101773.87390-0.667405.711303.82990K562STAU1
    ALYREFENSG00000183684.61127.690102184.63050-0.954003.885701.94280K562STIP1
    ALYREFENSG00000183684.62179.650402646.96400-0.280202.900901.35760K562SUCLG1
    ALYREFENSG00000183684.6735.97360987.80180-0.424602.425701.47840K562SUPV3L1
    ALYREFENSG00000183684.61589.092801032.461200.622003.849602.87960K562SYNCRIP
    ALYREFENSG00000183684.6146.95180391.72610-1.414505.384603.06070K562TAF15
    ALYREFENSG00000183684.61397.10770842.729300.729208.117406.82580K562TARDBP
    ALYREFENSG00000183684.61175.36600812.940600.531806.220304.92190K562TIA1
    ALYREFENSG00000183684.6796.907301467.63100-0.881007.397605.81240K562TIAL1
    ALYREFENSG00000183684.61216.58850798.034200.608203.585202.31040K562TRA2A
    ALYREFENSG00000183684.6988.839601559.15830-0.657008.778106.88520K562TRIM56
    ALYREFENSG00000183684.62101.263702565.20220-0.287802.654201.41310K562TROVE2
    ALYREFENSG00000183684.6186.93680386.35630-1.047402.835701.72880K562U2AF1
    ALYREFENSG00000183684.6224.20230399.18590-0.832303.594002.67730K562U2AF2
    ALYREFENSG00000183684.61325.524202389.41850-0.8501029.0163026.99250K562UPF1
    ALYREFENSG00000183684.6809.452901112.24150-0.458503.230401.92650K562UTP3
    ALYREFENSG00000183684.61216.321102044.54250-0.7493013.5149011.53130K562WDR3
    ALYREFENSG00000183684.61769.364202126.13850-0.265003.772202.79410K562WDR43
    ALYREFENSG00000183684.61802.936202455.66240-0.445802.807001.93620K562ZC3H8
    Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

    *: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
    **: "-log(0)" was displayed as "99999.99999".






    The Knockdown/knockout RNA-Seq assay for ALYREF is not available on ENCORE database.





    1 RBPs can affect the splicing of ALYREF :

    Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
    A3SSALYREFENSG00000183684.6chr17-7984677679846961798467767984686579847057798472560.295000.001060.00731longerK562AQR
    A3SSALYREFENSG00000183684.6chr17-7984639579846605798463957984645979846751798469610.293000.007300.04026longerK562AQR

    *: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
    **: "-log(0)" was displayed as "99999.99999".





    The Knockdown/knockout RNA-Seq assay for ALYREF is not avaliable on ENCORE database.