TASP1

General Information

Gene Name       : TASP1
Gene ID             : ENSG00000089123.15
Essential Gene : No

Functions

Localization

Domains (AlphaFold: TASP1)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878TASP1ENSG00000089123.155.015.075.04ENCSR000AEF
HepG2TASP1ENSG00000089123.1511.3513.8512.60ENCSR985KAT
K562TASP1ENSG00000089123.153.292.462.88ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for TASP1 is not avaliable on ENCORE database.



Proteins bound to RNA
  • TASP1 RNA is bound by 18 proteins.  







eCLIP assay for TASP1 is not avaliable on ENCORE database.





18 proteins are bound to TASP1 RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr201339809313398161-3'-UTR,CDS,intron-Distal,intron-Proximal5.269309.15113HepG2PPIG
chr201359531313595413-3'-UTR,CDS,intron-Distal,intron-Proximal3.105963.51696K562KHSRP
chr201337068813370827-3'-UTR,intron-Distal5.094558.06678K562TARDBP
chr201337101613371082-3'-UTR,CDS,intron-Distal,intron-Proximal5.278407.65840HepG2PPIG
chr201361954013619568-5'-UTR,intron-Distal,intron-Proximal3.868393.19625HepG2NCBP2
chr201361067013610732-5'-UTR,CDS,intron-Distal,intron-Proximal3.313734.09741HepG2PPIG
chr201361076713610800-5'-UTR,intron-Distal,intron-Proximal4.314544.87288HepG2NCBP2
chr201346385613463937-CDS,intron-Distal,intron-Proximal4.411556.65114HepG2PRPF8
chr201351466813514777-CDS,intron-Distal,intron-Proximal3.1284312.14610HepG2PPIG
chr201350911413509151-CDS,intron-Distal3.384185.15500HepG2BCLAF1
chr201360584313605893-CDS,intron-Distal4.349927.97334HepG2BCLAF1
chr201356789613567921-CDS,intron-Distal,intron-Proximal4.695875.86613HepG2PPIG
chr201356789413568013-CDS,intron-Distal,intron-Proximal4.6927614.65888HepG2BCLAF1
chr201360409413604117-CDS,intron-Distal3.384413.05161HepG2PPIG
chr201356160513561627-CDS,intron-Distal4.430964.84481HepG2PPIG
chr201356160313561628-CDS,intron-Distal4.805355.03746HepG2BCLAF1
chr201356154813561582-CDS,intron-Distal3.005163.99124HepG2PPIG
chr201355015313550175-CDS,intron-Distal,intron-Proximal4.741305.68196HepG2BCLAF1
chr201351467113514769-CDS,intron-Distal4.457765.85983HepG2GRWD1
chr201351468613514768-CDS,intron-Distal3.469147.58656HepG2BCLAF1
chr201353966513539760-CDS,intron-Distal5.8088813.02740HepG2BCLAF1
chr201343453613434667-intron-Distal4.4927512.01969HepG2MATR3
chr201359520813595307-intron-Distal,intron-Proximal3.714113.58352HepG2CSTF2
chr201345950213459605-intron-Distal3.739363.06150K562KHSRP
chr201342151413421567-intron-Distal4.551285.59955HepG2SUGP2
chr201359221813592304-intron-Distal3.955193.07980HepG2HNRNPM
chr201344472413444796-intron-Distal4.622296.32237HepG2SUGP2
chr201342529613425370-intron-Distal4.118183.86809HepG2SUGP2
chr201356886013568925-intron-Distal4.691926.42900HepG2PTBP1
chr201343457513434717-intron-Distal3.981713.62025K562MATR3
chr201343456613434655-intron-Distal4.873206.62062HepG2PTBP1
chr201356882113568915-intron-Distal4.893085.39854K562PTBP1
chr201360104113601178-intron-Distal3.290804.72639K562KHSRP
chr201342630913426389-intron-Distal3.351013.91859HepG2SUGP2
chr201348972113489773-intron-Distal5.351416.92541HepG2HNRNPL
chr201350733313507402-intron-Distal3.727584.48652HepG2PTBP1
chr201355683313556969-intron-Distal5.7997813.68181HepG2PTBP1
chr201345976813459831-intron-Distal4.209317.31646HepG2U2AF2
chr201359160713591695-intron-Distal3.553615.97243HepG2U2AF2
chr201342240913422472-intron-Distal3.881213.16028HepG2SUGP2
chr201342105613421104-intron-Distal3.920213.39864HepG2SUGP2
chr201350757513507643-intron-Distal4.386243.96879HepG2MATR3
chr201348689613486958-intron-Distal4.030843.27946HepG2HNRNPM
chr201327982113279892-intron-Distal5.8785111.24011HepG2XPO5
chr201341731713417398-intron-Distal4.315324.10336HepG2SUGP2
chr201343453013434618-intron-Distal5.056168.31472HepG2SUGP2
chr201350743013507507-intron-Distal5.168268.82480HepG2PTBP1
chr201350756813507642-intron-Distal4.495604.43431HepG2RBFOX2
chr201345006913450155-intron-Distal3.470054.23286HepG2QKI
chr201344531213445367-intron-Distal3.914773.16028HepG2SUGP2
chr201343438313434448-intron-Distal3.889754.84410HepG2SUGP2
chr201341759413417657-intron-Distal4.016543.79098HepG2SUGP2
chr201342073213420787-intron-Distal3.207253.59523HepG2SUGP2
chr201341711813417184-intron-Distal3.091593.46325HepG2SUGP2
chr201342092713420975-intron-Distal4.082983.63454HepG2SUGP2
chr201342157013421684-intron-Distal4.352893.86368HepG2HNRNPM
chr201349989513499986-intron-Distal4.272283.30696K562EXOSC5
chr201342107313421136-intron-Distal4.285644.31720HepG2MATR3
chr201355533013555399-intron-Distal4.122487.75161HepG2QKI
chr201357698313577023-intron-Distal4.258273.89085K562EXOSC5
chr201341754013417641-intron-Distal4.276543.83958HepG2QKI
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for TASP1 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for TASP1 is not available on ENCORE database.

  • 44 RBPs can affect the levels of TASP1.  








The Knockdown/knockout RNA-Seq assay for TASP1 is not available on ENCORE database.





44 RBPs can affect the gene expression of TASP1 :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
TASP1ENSG00000089123.11785.84130558.358900.492902.755602.22500HepG2AKAP1
TASP1ENSG00000089123.11596.02150438.949400.441202.059301.38520HepG2CIRBP
TASP1ENSG00000089123.11225.61440321.09900-0.509203.452602.72520HepG2CKAP4
TASP1ENSG00000089123.11437.38300211.031501.051304.065903.13220HepG2CNOT7
TASP1ENSG00000089123.11378.29630557.77810-0.560205.859404.83680HepG2DAZAP1
TASP1ENSG00000089123.11174.59550335.26220-0.941305.131704.11860HepG2DDX55
TASP1ENSG00000089123.11315.97420459.34680-0.539801.827901.31530HepG2DDX6
TASP1ENSG00000089123.11163.59680285.21320-0.801905.856204.86700HepG2DNAJC21
TASP1ENSG00000089123.11709.36010585.659600.276402.008801.47860HepG2ETF1
TASP1ENSG00000089123.11147.37500235.56210-0.676603.202702.22970HepG2GEMIN5
TASP1ENSG00000089123.11170.78400374.95700-1.134604.667303.34240HepG2GNB2L1
TASP1ENSG00000089123.11181.46860287.94570-0.666103.500602.78420HepG2HNRNPA1
TASP1ENSG00000089123.11211.82770512.63590-1.2750018.8381016.83570HepG2HNRNPA2B1
TASP1ENSG00000089123.11209.50690320.29030-0.612403.269102.52120HepG2HNRNPC
TASP1ENSG00000089123.11266.31740367.26880-0.463703.004402.25920HepG2HNRNPF
TASP1ENSG00000089123.11406.34400508.07940-0.322402.208001.59640HepG2HNRNPL
TASP1ENSG00000089123.11143.02710276.24270-0.949605.654404.78840HepG2HNRNPLL
TASP1ENSG00000089123.11261.46750361.65610-0.468002.714501.99760HepG2IGF2BP1
TASP1ENSG00000089123.11369.89560516.70540-0.482202.371201.60640HepG2LARP4
TASP1ENSG00000089123.11323.32990492.56620-0.607301.903201.35370HepG2MAGOH
TASP1ENSG00000089123.11339.58510527.98920-0.636705.058504.28180HepG2PUF60
TASP1ENSG00000089123.11343.69340441.74100-0.362102.200201.64290HepG2RECQL
TASP1ENSG00000089123.11223.01750343.66850-0.623902.831001.87790HepG2RPS10
TASP1ENSG00000089123.11188.62300257.40410-0.448501.852001.33930HepG2RPS19
TASP1ENSG00000089123.11338.44260443.70260-0.390702.441601.88140HepG2SF3B4
TASP1ENSG00000089123.11375.35430506.28950-0.431702.243701.60090HepG2SLBP
TASP1ENSG00000089123.11185.91290304.23000-0.710502.955102.14580HepG2SNRNP70
TASP1ENSG00000089123.11349.56250552.87980-0.661406.941806.24800HepG2SRFBP1
TASP1ENSG00000089123.11379.39890521.33010-0.458503.656402.95520HepG2SRSF5
TASP1ENSG00000089123.11277.62470360.82530-0.378202.089601.47520HepG2SRSF7
TASP1ENSG00000089123.11448.51410592.88080-0.402603.465202.78440HepG2SUCLG1
TASP1ENSG00000089123.11158.38610234.68920-0.567302.731001.79530HepG2SUPT6H
TASP1ENSG00000089123.11180.23760416.28220-1.2077015.0347013.88360HepG2TAF15
TASP1ENSG00000089123.11219.14880309.14910-0.496402.754102.25420HepG2TIAL1
TASP1ENSG00000089123.11132.73490311.92870-1.2327013.6786012.56060HepG2TRIM56
TASP1ENSG00000089123.11377.20200515.84710-0.451602.847201.96070HepG2TUFM
TASP1ENSG00000089123.11201.47600297.27000-0.561202.464101.86890HepG2U2AF1
TASP1ENSG00000089123.11127.55130309.89290-1.280703.697402.54920HepG2U2AF2
TASP1ENSG00000089123.11111.53970197.19180-0.822003.712502.83440HepG2UCHL5
TASP1ENSG00000089123.11496.51790295.404700.749107.575606.66440HepG2UTP3
TASP1ENSG00000089123.1147.61610106.54840-1.162004.154402.10110K562DDX51
TASP1ENSG00000089123.1177.19830125.63470-0.702602.466801.45380K562HNRNPA1
TASP1ENSG00000089123.1144.5593083.92810-0.913402.296701.74580K562HNRNPC
TASP1ENSG00000089123.1135.5271081.93360-1.205503.350401.75850K562PHF6
TASP1ENSG00000089123.1191.07490140.57620-0.626202.275801.41830K562SRPK2
TASP1ENSG00000089123.1137.0007076.87940-1.055002.422901.54750K562TRIM56
TASP1ENSG00000089123.1146.4104098.39250-1.084103.415902.27670K562UCHL5
TASP1ENSG00000089123.1173.86930147.44720-0.997204.787203.86860K562UPF1
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for TASP1 is not available on ENCORE database.





8 RBPs can affect the splicing of TASP1 :

Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
SETASP1ENSG00000089123.11chr20-135501531355023313539654135397611356789613568017-0.128000.001580.02077excludedHepG2U2AF2
MXETASP1ENSG00000089123.11chr20-13539654135397611355015313550233135146681351478813561543135616280.359000.000190.009181includedK562RBM15
MXETASP1ENSG00000089123.11chr20-1356789613568017136040921360416113539654135397611360583113605899-0.417000.002280.063482includedHepG2SF3A3
MXETASP1ENSG00000089123.11chr20-13550153135502331356154313561628135396541353976113567896135680170.164000.002280.027431includedHepG2SFPQ
MXETASP1ENSG00000089123.11chr20-1355015313550233135678961356801713539654135397611360409213604161-0.173000.001340.074182includedHepG2NOL12
MXETASP1ENSG00000089123.11chr20-1355015313550233135678961356801713539654135397611360409213604161-0.252000.000590.017162includedHepG2DDX55
MXETASP1ENSG00000089123.11chr20-13550153135502331356154313561628135396541353976113567896135680170.181000.001970.056081includedHepG2RBFOX2
MXETASP1ENSG00000089123.11chr20-1355015313550233135678961356801713539654135397611360409213604161-0.196000.002240.065072includedHepG2SUPV3L1

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".





The Knockdown/knockout RNA-Seq assay for TASP1 is not avaliable on ENCORE database.