SPAG6

General Information

Gene Name       : SPAG6
Gene ID             : ENSG00000077327.15
Essential Gene : No

Functions

Localization

Domains (AlphaFold: SPAG6)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878SPAG6ENSG00000077327.150.600.360.48ENCSR000AEF
HepG2SPAG6ENSG00000077327.150.000.000.00ENCSR985KAT
K562SPAG6ENSG00000077327.1511.348.6710.00ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for SPAG6 is not avaliable on ENCORE database.



Proteins bound to RNA

  • NO known proteins bind on SPAG6 RNA with finished eCLIP experiments on ENCORE database.





eCLIP assay for SPAG6 is not avaliable on ENCORE database.






NO known proteins are bound to SPAG6 RNA with finished eCLIP experiments on ENCORE database.





eCLIP assay for SPAG6 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for SPAG6 is not available on ENCORE database.

  • 40 RBPs can affect the levels of SPAG6.  








The Knockdown/knockout RNA-Seq assay for SPAG6 is not available on ENCORE database.





40 RBPs can affect the gene expression of SPAG6 :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
SPAG6ENSG00000077327.11128.7918070.497700.869303.105101.84640K562AARS
SPAG6ENSG00000077327.11130.84780240.21250-0.876404.857803.21520K562ABCF1
SPAG6ENSG00000077327.11183.07090547.63350-1.580807.384806.52260K562AGGF1
SPAG6ENSG00000077327.11196.99960569.80750-1.532306.515205.48020K562AKAP8L
SPAG6ENSG00000077327.11295.66690173.394700.769805.253703.46650K562APOBEC3C
SPAG6ENSG00000077327.1162.68280192.43780-1.618207.121806.25060K562AQR
SPAG6ENSG00000077327.11243.10310597.80860-1.298106.049904.63400K562ATP5C1
SPAG6ENSG00000077327.11109.08270190.01350-0.800704.389402.97720K562CPEB4
SPAG6ENSG00000077327.11276.58140196.687700.491702.713402.06720K562DDX47
SPAG6ENSG00000077327.11350.18800613.34180-0.808602.934802.02910K562DKC1
SPAG6ENSG00000077327.11375.19570148.439801.3377016.4216014.88450K562EIF2S2
SPAG6ENSG00000077327.11139.1701068.589901.020703.042601.98220K562EIF3A
SPAG6ENSG00000077327.11143.9612069.823601.043804.058002.77450K562EIF3D
SPAG6ENSG00000077327.11207.00470126.103600.715002.208501.49210K562EIF3G
SPAG6ENSG00000077327.11108.7265060.742500.839802.707902.10830K562FXR1
SPAG6ENSG00000077327.11151.8839091.179800.736102.550501.87670K562G3BP2
SPAG6ENSG00000077327.11176.4078077.205801.192006.341305.47310K562HNRNPC
SPAG6ENSG00000077327.11684.67320234.118801.5481023.9539021.83240K562HSPD1
SPAG6ENSG00000077327.11312.44900604.81330-0.952903.535902.59040K562KIF1C
SPAG6ENSG00000077327.11132.3539074.675800.825603.176301.66480K562LARP7
SPAG6ENSG00000077327.11321.16200677.52900-1.077004.817603.55390K562MBNL1
SPAG6ENSG00000077327.11175.71250474.88950-1.434405.441504.05880K562NAA15
SPAG6ENSG00000077327.1182.21600288.74560-1.812304.095502.83080K562PABPN1
SPAG6ENSG00000077327.11107.9830063.479000.766401.939001.30460K562PRPF8
SPAG6ENSG00000077327.11169.64840119.795300.501901.948701.37390K562PTBP1
SPAG6ENSG00000077327.11141.28770565.30730-2.000409.119308.18200K562PUS1
SPAG6ENSG00000077327.11109.18430550.62900-2.3343010.608509.47210K562RBM15
SPAG6ENSG00000077327.1151.48780114.84490-1.157403.719602.73450K562RBM22
SPAG6ENSG00000077327.11143.3020064.645701.148304.489603.44580K562RPS19
SPAG6ENSG00000077327.11210.2834081.347801.370107.293705.57020K562RPS3
SPAG6ENSG00000077327.1171.98590154.83620-1.105005.188402.73950K562SAFB2
SPAG6ENSG00000077327.11163.4647085.538400.934204.193902.38270K562SDAD1
SPAG6ENSG00000077327.11101.89160264.19530-1.374602.555801.41770K562SF1
SPAG6ENSG00000077327.1180.56780125.68980-0.641602.126801.40520K562SF3A3
SPAG6ENSG00000077327.1143.9726094.80210-1.108304.053503.01140K562SF3B4
SPAG6ENSG00000077327.11189.43410115.792800.710003.257801.50840K562SND1
SPAG6ENSG00000077327.1170.46280117.44440-0.737002.330201.67420K562SRSF1
SPAG6ENSG00000077327.11150.2170093.141000.689502.678401.87370K562SYNCRIP
SPAG6ENSG00000077327.11154.05660572.94560-1.894906.930004.63200K562UTP18
SPAG6ENSG00000077327.11267.36020120.167101.1536010.934609.38670K562WDR43
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for SPAG6 is not available on ENCORE database.





1 RBPs can affect the splicing of SPAG6 :

Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
SESPAG6ENSG00000077327.11chr10+226999592270010522690089226902062270554722706550-0.346000.000410.01887excludedK562TARDBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".





The Knockdown/knockout RNA-Seq assay for SPAG6 is not avaliable on ENCORE database.