RP11-968A15.8

General Information

Gene Name       : RP11-968A15.8
Gene ID             :
Essential Gene : No

Functions

Localization

Domains (AlphaFold: RP11-968A15.8)


Antibody Validation


Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for RP11-968A15.8 is not avaliable on ENCORE database.



Proteins bound to RNA

  • RP11-968A15.8 RNA is bound by 51 proteins.  







eCLIP assay for RP11-968A15.8 is not avaliable on ENCORE database.





51 proteins are bound to RP11-968A15.8 RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr125467612954676143+intron-Distal,intron-Proximal5.8306211.79381K562PRPF8
chr125468072654680815+3'-UTR,intron-Distal,intron-Proximal3.191837.05924K562NOLC1
chr125473433554734404+3'-UTR,CDS,intron-Distal,intron-Proximal4.422593.89826HepG2BCLAF1
chr125467966754679699+3'-UTR,intron-Distal7.3745573.66626HepG2GTF2F1
chr125467635854676361+CDS,intron-Distal4.1698514.20379K562LIN28B
chr125467636154676377+CDS,intron-Distal4.2071910.70091K562LIN28B
chr125467666454676731+intron-Distal,intron-Proximal4.1217525.05533K562PRPF8
chr125467686154676896+CDS,intron-Distal,intron-Proximal3.591455.59842HepG2GRSF1
chr125467822654678254+3'-UTR,intron-Distal,intron-Proximal4.6656912.28772HepG2QKI
chr125473710054737154+intron-Distal,intron-Proximal4.388896.99120K562AQR
chr125467635654676375+CDS,intron-Distal,intron-Proximal4.024318.84167HepG2LIN28B
chr125467810954678131+3'-UTR,intron-Distal,intron-Proximal4.0469725.08122K562AQR
chr125468037354680509+3'-UTR,intron-Distal,intron-Proximal4.1868016.24774HepG2AQR
chr125468048254680522+3'-UTR,intron-Distal,intron-Proximal3.3946119.55063HepG2BUD13
chr125467966054679740+3'-UTR,intron-Distal3.8308017.35196HepG2CSTF2T
chr125467754154677593+intron-Distal,intron-Proximal3.0709818.04287K562SF3B4
chr125467630654676355+intron-Distal,intron-Proximal5.8254615.47477HepG2EFTUD2
chr125467775954677820+intron-Distal,intron-Proximal4.8876728.92672K562PRPF8
chr125467813154678177+3'-UTR,intron-Distal,intron-Proximal4.055196.34912HepG2TIAL1
chr125467576954675808+intron-Distal,intron-Proximal4.009876.56262K562TIA1
chr125467766454677669+CDS,intron-Distal4.4253449.69430HepG2SUB1
chr125467763054677664+CDS,intron-Distal4.33028400.00000HepG2SUB1
chr125473099254731034+intron-Distal5.6916814.48605HepG2DGCR8
chr125467759954677627+CDS,intron-Distal,intron-Proximal3.2637747.04717HepG2BCLAF1
chr125467811654678129+3'-UTR,intron-Distal,intron-Proximal4.958767.09786HepG2AQR
chr125467665354676659+CDS,intron-Distal,intron-Proximal3.1066519.03923HepG2BCLAF1
chr125467860854678656+3'-UTR,intron-Distal5.64121400.00000HepG2SUB1
chr125467971254679736+3'-UTR,intron-Distal3.212548.82539K562DDX6
chr125467608454676124+intron-Distal,intron-Proximal5.0189119.46809HepG2PRPF8
chr125467587054675906+CDS,intron-Distal,intron-Proximal3.5224038.54742K562SF3B4
chr125467462654674692+intron-Distal,intron-Proximal3.929718.47083HepG2EFTUD2
chr125467819554678215+3'-UTR,intron-Distal,intron-Proximal4.6878223.88005K562EFTUD2
chr125467465554674693+intron-Distal,intron-Proximal3.038264.07902HepG2TIAL1
chr125467640054676487+CDS,intron-Distal,intron-Proximal4.9313156.98447HepG2PRPF8
chr125467813254678196+3'-UTR,intron-Distal,intron-Proximal4.4644744.30001K562PRPF8
chr125467759454677673+CDS,intron-Distal,intron-Proximal3.1966322.95892HepG2G3BP1
chr125467650454676546+intron-Distal,intron-Proximal4.4795815.96223K562KHSRP
chr125467658354676603+CDS,intron-Distal,intron-Proximal3.024936.34658HepG2DDX55
chr125467626554676270+CDS,intron-Distal3.675566.69467HepG2LIN28B
chr125467572654675750+intron-Distal,intron-Proximal3.912884.39974K562GPKOW
chr125468035954680452+3'-UTR,intron-Distal,intron-Proximal3.6958726.37218HepG2PRPF4
chr125467617754676198+CDS,intron-Distal,intron-Proximal3.060919.23816K562RPS3
chr125467953954679581+3'-UTR,intron-Distal3.156425.21454K562TIA1
chr125473438754734400+3'-UTR,CDS,intron-Distal,intron-Proximal3.923906.98150K562DDX3X
chr125467685854676892+CDS,intron-Distal,intron-Proximal3.419944.06432HepG2KHSRP
chr125467759554677601+CDS,intron-Distal,intron-Proximal3.238303.98845HepG2GRSF1
chr125473606554736153+3'-UTR,CDS,intron-Distal,intron-Proximal3.7696910.43758K562AQR
chr125467653254676559+intron-Distal,intron-Proximal5.3043615.35006K562SF3B4
chr125467661654676639+CDS,intron-Distal,intron-Proximal3.036115.12533HepG2GRSF1
chr125468069754680761+3'-UTR,intron-Distal,intron-Proximal3.6426226.10561K562SF3B4
chr125467646554676542+intron-Distal,intron-Proximal5.2612550.23270K562EFTUD2
chr125467647154676494+intron-Distal,intron-Proximal3.5854610.24116K562BUD13
chr125468008554680167+3'-UTR,intron-Distal4.827646.17784HepG2TIAL1
chr125467463354674655+intron-Distal,intron-Proximal3.345033.71919HepG2TIAL1
chr125471894354719007+3'-UTR,5'-UTR,CDS,intron-Distal,intron-Proximal4.6359816.79021HepG2PRPF8
chr125467966454679697+3'-UTR,intron-Distal5.2983544.10483HepG2PRPF4
chr125467967554679788+3'-UTR,intron-Distal3.108889.47680HepG2KHSRP
chr125468045954680491+3'-UTR,intron-Distal3.1120411.67658K562U2AF1
chr125467966354679733+3'-UTR,intron-Distal4.2274817.24159HepG2PCBP2
chr125468069154680780+3'-UTR,intron-Distal,intron-Proximal4.5987447.39073HepG2BUD13
chr125467624754676257+CDS,intron-Distal3.9977014.40322K562LIN28B
chr125467599854676029+CDS,intron-Distal,intron-Proximal3.210369.12012HepG2BCLAF1
chr125467557854675596+3'-UTR,CDS,intron-Distal,intron-Proximal3.1421413.11903K562LIN28B
chr125467512554675168+intron-Distal,intron-Proximal3.5464814.36417HepG2BUD13
chr125467896054679010+3'-UTR,intron-Distal3.457085.13503K562LIN28B
chr125468075354680805+3'-UTR,intron-Distal3.264554.63335HepG2LSM11
chr125467760154677625+CDS,intron-Distal,intron-Proximal3.0284849.79678K562GRWD1
chr125467966754679744+3'-UTR,intron-Distal5.0015262.64929HepG2FAM120A
chr125467969954679751+3'-UTR,intron-Distal6.8701380.04615HepG2GTF2F1
chr125473700854737084+3'-UTR,CDS,intron-Distal,intron-Proximal4.354964.08604HepG2PPIG
chr125467766154677675+CDS,intron-Distal3.4529324.68571HepG2BCLAF1
chr125467858554678588+3'-UTR,intron-Distal4.9959236.08414HepG2SUB1
chr125473098154731034+intron-Distal5.1218811.81473K562DGCR8
chr125468037254680405+3'-UTR,intron-Distal,intron-Proximal4.6964223.47072K562GTF2F1
chr125467966954679754+3'-UTR,intron-Distal3.9322428.56250K562CSTF2T
chr125467760054677623+CDS,intron-Distal,intron-Proximal3.4103519.14063K562LIN28B
chr125473111554731215+intron-Distal5.8409622.34392K562DROSHA
chr125473700854737101+3'-UTR,CDS,intron-Distal,intron-Proximal3.706115.69815HepG2G3BP1
chr125473112654731188+intron-Distal5.381048.67963K562DGCR8
chr125473597254736091+3'-UTR,CDS,intron-Distal,intron-Proximal3.073807.37756K562BUD13
chr125467535054675412+intron-Distal,intron-Proximal3.438203.81210HepG2KHSRP
chr125467755954677653+CDS,intron-Distal,intron-Proximal4.1332211.99655HepG2AQR
chr125467858954678635+3'-UTR,intron-Distal4.0425410.72341HepG2TIAL1
chr125468043654680457+3'-UTR,intron-Distal,intron-Proximal4.1286753.89361K562SF3B4
chr125467460354674651+CDS,intron-Distal,intron-Proximal4.024995.23469HepG2AQR
chr125468052354680569+3'-UTR,intron-Distal,intron-Proximal4.077506.81564HepG2PRPF8
chr125473107254731083+intron-Distal6.0024724.25811K562DGCR8
chr125473598954736068+3'-UTR,CDS,intron-Distal,intron-Proximal3.761635.22975HepG2G3BP1
chr125467759554677599+CDS,intron-Distal,intron-Proximal3.1683740.86739K562UCHL5
chr125467820154678296+3'-UTR,intron-Distal,intron-Proximal3.1075621.14341K562PRPF8
chr125467641054676450+CDS,intron-Distal,intron-Proximal3.4609432.80490K562UCHL5
chr125468051554680572+3'-UTR,intron-Distal,intron-Proximal3.5581325.07075K562AQR
chr125467463954674661+intron-Distal,intron-Proximal4.3366314.78088K562TIA1
chr125468036154680439+3'-UTR,intron-Distal,intron-Proximal3.9201021.04905HepG2PCBP2
chr125467813354678179+3'-UTR,intron-Distal,intron-Proximal3.556537.39418HepG2EFTUD2
chr125467630354676370+CDS,intron-Distal,intron-Proximal4.2220456.84242K562SF3B4
chr125468037854680404+3'-UTR,intron-Distal,intron-Proximal3.861659.91704HepG2GTF2F1
chr125467613054676156+intron-Distal,intron-Proximal5.1150513.11135K562SF3B4
chr125467967654679727+3'-UTR,intron-Distal5.333367.12859K562APOBEC3C
chr125467859554678660+3'-UTR,intron-Distal4.3285959.60317K562TIA1
chr125467859254678649+3'-UTR,intron-Distal4.212856.55445HepG2TIA1
chr125468049354680523+3'-UTR,intron-Distal,intron-Proximal3.878235.64484HepG2PRPF8
chr125467635654676358+CDS,intron-Distal,intron-Proximal4.3828214.45186K562LIN28B
chr125467819454678226+3'-UTR,intron-Distal,intron-Proximal5.1158019.49221HepG2QKI
chr125467572454675737+CDS,intron-Distal,intron-Proximal3.856034.54206HepG2PRPF8
chr125467759454677599+CDS,intron-Distal,intron-Proximal3.3688245.58828HepG2SUB1
chr125467622854676292+CDS,intron-Distal,intron-Proximal3.4095518.13452K562EFTUD2
chr125467813354678145+3'-UTR,intron-Distal,intron-Proximal3.6996330.72326K562AQR
chr125467630354676352+intron-Distal,intron-Proximal6.9800233.29700K562EFTUD2
chr125467607554676084+CDS,intron-Distal3.8501211.14388HepG2PRPF8
chr125468067554680772+3'-UTR,intron-Distal,intron-Proximal6.0882812.49979HepG2AQR
chr125467611254676157+intron-Distal,intron-Proximal3.528373.24842K562RBM22
chr125467759554677600+CDS,intron-Distal,intron-Proximal3.3822911.45714K562LIN28B
chr125467512454675181+5'-UTR,CDS,intron-Distal,intron-Proximal3.826244.57180HepG2AQR
chr125467662654676658+CDS,intron-Distal,intron-Proximal3.7540315.41521K562LIN28B
chr125468045254680500+3'-UTR,intron-Distal3.349917.50569HepG2PRPF4
chr125467626554676270+CDS,intron-Distal4.4337815.33612K562LIN28B
chr125467575354675793+intron-Distal,intron-Proximal5.9737214.88219K562PRPF8
chr125467532854675371+intron-Distal,intron-Proximal5.237018.11176K562TIA1
chr125467663954676659+CDS,intron-Distal,intron-Proximal4.0275710.16253HepG2GRSF1
chr125467658254676619+CDS,intron-Distal,intron-Proximal3.2725322.58193K562DDX24
chr125467825454678296+3'-UTR,intron-Distal,intron-Proximal3.254597.67272HepG2QKI
chr125467668754676732+intron-Distal,intron-Proximal3.526888.73707HepG2RBM22
chr125467645654676514+intron-Distal,intron-Proximal4.3209324.71318K562PRPF8
chr125468043754680459+3'-UTR,intron-Distal,intron-Proximal3.1950811.59721K562U2AF1
chr125467777254677798+intron-Distal,intron-Proximal6.0360411.80896HepG2PRPF8
chr125467813754678190+3'-UTR,intron-Distal,intron-Proximal4.0029212.24015K562QKI
chr125467759454677626+CDS,intron-Distal,intron-Proximal3.1326212.61627K562APOBEC3C
chr125467815254678166+3'-UTR,intron-Distal,intron-Proximal3.696819.08790HepG2BCLAF1
chr125467759954677620+CDS,intron-Distal,intron-Proximal3.96113400.00000HepG2SUB1
chr125473103454731085+intron-Distal6.4073724.11325HepG2DGCR8
chr125467606054676075+CDS,intron-Distal3.6248911.13244HepG2PRPF8
chr125473111654731191+intron-Distal5.5606511.43966HepG2DGCR8
chr125467585654675869+intron-Distal,intron-Proximal3.177385.57638K562SMNDC1
chr125467641254676478+CDS,intron-Distal,intron-Proximal3.111126.99753K562SRSF7
chr125467969454679783+3'-UTR,intron-Distal5.59736400.00000K562GTF2F1
chr125467760054677622+CDS,intron-Distal,intron-Proximal3.1835925.82429K562NOLC1
chr125467813454678182+3'-UTR,intron-Distal,intron-Proximal4.082635.35561K562RBM22
chr125467967754679739+3'-UTR,intron-Distal3.3250717.02382K562FAM120A
chr125467624054676247+CDS,intron-Distal3.241935.65201K562LIN28B
chr125467705554677111+intron-Distal,intron-Proximal3.018265.47333HepG2TAF15
chr125467528854675313+intron-Distal,intron-Proximal4.0051110.46325K562SRSF1
chr125467572254675725+CDS,intron-Distal3.0535443.73957K562UCHL5
chr125467762754677661+CDS,intron-Distal3.4788858.98018HepG2BCLAF1
chr125468037054680451+3'-UTR,intron-Distal,intron-Proximal3.541504.62302HepG2SF3B4
chr125468087754680954+intron-Distal4.0492910.13809K562CSTF2T
chr125468087554680953+intron-Distal5.5080814.80153HepG2CSTF2
chr125467803654678130+3'-UTR,CDS,intron-Distal,intron-Proximal3.2680126.27959HepG2PRPF8
chr125467762054677630+CDS,intron-Distal4.16395400.00000HepG2SUB1
chr125467865654678721+3'-UTR,intron-Distal,polyA_site5.21252400.00000HepG2SUB1
chr125473598854736039+3'-UTR,CDS,intron-Distal,intron-Proximal4.598518.13934K562RPS3
chr125467819054678246+3'-UTR,intron-Distal,intron-Proximal3.3788515.29822K562QKI
chr125468073754680754+3'-UTR,intron-Distal3.448435.13777HepG2PRPF8
chr125467572154675725+CDS,intron-Distal3.0682116.22534HepG2BCLAF1
chr125467647754676492+intron-Distal,intron-Proximal3.445203.86342K562SMNDC1
chr125467810654678112+3'-UTR,intron-Distal,intron-Proximal3.611848.66838HepG2BCLAF1
chr125467853054678588+3'-UTR,intron-Distal3.1352729.13440K562NOLC1
chr125473599054736071+3'-UTR,CDS,intron-Distal3.027454.32857K562LIN28B
chr125467814354678194+3'-UTR,intron-Distal,intron-Proximal4.6782320.06199HepG2QKI
chr125467967254679754+3'-UTR,intron-Distal3.705279.82197K562EWSR1
chr125467970354679729+3'-UTR,intron-Distal4.5344024.81879HepG2PRPF4
chr125467969754679703+3'-UTR,intron-Distal5.1100739.08424HepG2PRPF4
chr125467464254674669+intron-Distal,intron-Proximal3.171313.34231K562RBM15
chr125468040554680430+3'-UTR,intron-Distal,intron-Proximal3.5758622.10341K562GTF2F1
chr125473598854736041+3'-UTR,CDS,intron-Distal,intron-Proximal3.867416.39499HepG2GRWD1
chr125473105154731072+intron-Distal6.3213734.33786K562DGCR8
chr125473377154733858+intron-Distal4.696213.72755K562EIF4G2
chr125467583454675866+intron-Distal,intron-Proximal4.693515.68078HepG2AQR
chr125467966954679739+3'-UTR,intron-Distal3.7362246.26840K562FASTKD2
chr125467460654674620+intron-Distal,intron-Proximal5.1470411.82040K562AQR
chr125467462054674676+intron-Distal,intron-Proximal3.6363814.32349K562AQR
chr125467658254676615+CDS,intron-Distal,intron-Proximal3.7485336.20831K562UCHL5
chr125467777454677814+intron-Distal,intron-Proximal5.0378126.13602K562EFTUD2
chr125473378254733864+intron-Distal4.122444.13641K562TARDBP
chr125467647254676511+intron-Distal,intron-Proximal3.768576.77365K562TIA1
chr125467675054676815+intron-Distal,intron-Proximal4.6452111.02685HepG2RBFOX2
chr125467799254678032+intron-Distal,intron-Proximal6.2155911.49904K562SF3B4
chr125467762954677640+CDS,intron-Distal3.2790227.98226K562NOLC1
chr125467762354677672+CDS,intron-Distal3.2121821.50992K562LIN28B
chr125467674354676790+intron-Distal,intron-Proximal3.3900514.92885K562PRPF8
chr125467668854676752+intron-Distal,intron-Proximal3.712069.53035K562RBM22
chr125467624254676265+CDS,intron-Distal3.684696.69467HepG2LIN28B
chr125467776154677797+intron-Distal,intron-Proximal3.9365921.25836K562AQR
chr125473432954734387+3'-UTR,CDS,intron-Distal,intron-Proximal3.3813521.11688K562DDX3X
chr125467661554676658+CDS,intron-Distal,intron-Proximal3.4781562.60787K562UCHL5
chr125467975154679780+3'-UTR,intron-Distal3.458407.03748HepG2GTF2F1
chr125468037254680436+3'-UTR,intron-Distal,intron-Proximal3.8600271.43224K562SF3B4
chr125467587354675893+CDS,intron-Distal,intron-Proximal3.0490818.50902HepG2BCLAF1
chr125467463654674701+intron-Distal,intron-Proximal3.8129824.46064K562RBM22
chr125467572754675771+intron-Distal,intron-Proximal3.6959411.79768K562AQR
chr125468043954680480+3'-UTR,intron-Distal,intron-Proximal3.8865016.05146K562LIN28B
chr125467759554677621+CDS,intron-Distal,intron-Proximal3.0167811.24415HepG2LARP4
chr125467582054675855+intron-Distal,intron-Proximal6.5710750.93303K562SF3B4
chr125467966854679694+3'-UTR,intron-Distal6.0847979.66987K562GTF2F1
chr125467813254678195+3'-UTR,intron-Distal,intron-Proximal4.7278259.78534K562EFTUD2
chr125471891354718967+3'-UTR,5'-UTR,CDS,intron-Distal,intron-Proximal3.5916910.87648K562DDX3X
chr125467585554675870+intron-Distal,intron-Proximal5.5757961.53390K562SF3B4
chr125467662554676658+CDS,intron-Distal,intron-Proximal3.2105846.51507HepG2SUB1
chr125468038654680453+3'-UTR,intron-Distal,intron-Proximal4.5186941.46926HepG2SF3A3
chr125467666754676748+intron-Distal,intron-Proximal4.0158940.78744K562EFTUD2
chr125467575854675798+intron-Distal,intron-Proximal5.2967323.78146K562EFTUD2
chr125467863254678658+3'-UTR,intron-Distal3.1787815.56013K562NOLC1
chr125467459454674650+CDS,intron-Distal,intron-Proximal3.8161417.31908HepG2PRPF8
chr125467686154676864+CDS,intron-Distal,intron-Proximal3.331049.89087K562FUS
chr125467664054676658+CDS,intron-Distal3.195249.65936K562PUM1
chr125467661654676659+CDS,intron-Distal,intron-Proximal3.425913.15341HepG2AGGF1
chr125467861054678620+3'-UTR,intron-Distal3.0820246.46406K562NOLC1
chr125467759554677599+CDS,intron-Distal,intron-Proximal3.005949.13622K562NOLC1
chr125473435654734400+3'-UTR,CDS,intron-Distal,intron-Proximal3.389774.02291HepG2GRWD1
chr125473102654731071+intron-Distal5.001926.92775K562DROSHA
chr125467668054676727+intron-Distal,intron-Proximal5.0130215.47180HepG2PRPF8
chr125467635554676373+CDS,intron-Distal,intron-Proximal3.091936.49263HepG2PPIG
chr125467853954678585+3'-UTR,intron-Distal4.8936372.36907HepG2SUB1
chr125467625754676265+CDS,intron-Distal4.4519015.55725K562LIN28B
chr125467858854678603+3'-UTR,intron-Distal5.46058400.00000HepG2SUB1
chr125467822454678257+3'-UTR,intron-Distal,intron-Proximal3.1131214.48729K562KHSRP
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for RP11-968A15.8 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for RP11-968A15.8 is not available on ENCORE database.

  • No RBPs affect the gene expression of RP11-968A15.8 on ENCORE database.


The Knockdown/knockout RNA-Seq assay for RP11-968A15.8 is not available on ENCORE database.






No RBPs affect the gene expression of RP11-968A15.8 on ENCORE database.






The Knockdown/knockout RNA-Seq assay for RP11-968A15.8 is not available on ENCORE database.






No RBPs affect the alternative splcing events of RP11-968A15.8 on ENCORE database.





The Knockdown/knockout RNA-Seq assay for RP11-968A15.8 is not avaliable on ENCORE database.