GS1-600G8.3

General Information

Gene Name       : GS1-600G8.3
Gene ID             : ENSG00000231216.1
Essential Gene : No

Functions

Localization

Domains (AlphaFold: GS1-600G8.3)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878GS1-600G8.3ENSG00000231216.10.000.000.00ENCSR000AEF
HepG2GS1-600G8.3ENSG00000231216.10.000.000.00ENCSR985KAT
K562GS1-600G8.3ENSG00000231216.10.280.320.30ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for GS1-600G8.3 is not avaliable on ENCORE database.



Proteins bound to RNA
  • GS1-600G8.3 RNA is bound by 21 proteins.  







eCLIP assay for GS1-600G8.3 is not avaliable on ENCORE database.





21 proteins are bound to GS1-600G8.3 RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chrX1333535413335388+intron-Distal5.084556.79805K562U2AF1
chrX1333400513334060+intron-Distal3.002066.96981K562TAF15
chrX1333337213333465+intron-Distal4.2585915.59685K562FUS
chrX1333345213333515+intron-Distal3.004533.33035K562EWSR1
chrX1333548313335506+intron-Distal4.001343.54514K562TIA1
chrX1333509313335141+intron-Distal3.199847.49545K562TAF15
chrX1333293413332957+intron-Distal3.497945.44790K562FUS
chrX1333339613333447+intron-Distal3.5665012.15523K562EIF4G2
chrX1333337913333396+intron-Distal3.461476.33738K562EIF4G2
chrX1333204313332149+intron-Distal4.5477239.48245K562SF3B4
chrX1333329113333355+intron-Distal3.6128111.44838K562FUS
chrX1333345313333524+intron-Distal3.105718.00232K562TAF15
chrX1333326413333334+intron-Distal,intron-Proximal5.5927715.66344K562ZRANB2
chrX1333337713333453+intron-Distal3.1165211.22667K562TAF15
chrX1333538813335440+intron-Distal5.343668.11261K562U2AF1
chrX1332946513329554+intron-Distal4.263069.52278K562FUS
chrX1333418313334236+intron-Distal3.206635.37138K562TAF15
chrX1333293013332959+intron-Distal3.9648916.48397K562TIA1
chrX1333539213335437+intron-Distal5.149857.81397K562U2AF2
chrX1333329213333355+intron-Distal3.8088611.28745K562TAF15
chrX1332938513329465+intron-Distal3.984538.56644K562FUS
chrX1333336813333399+intron-Distal5.0920437.36486K562TARDBP
chrX1333291313332930+intron-Distal3.3571511.87302K562TIA1
chrX1333440513334437+intron-Distal3.173465.22753K562TAF15
chrX1333326613333292+intron-Distal,intron-Proximal3.226214.48407K562TAF15
chrX1333163913331673+intron-Distal3.136817.46934K562KHSRP
chrX1333295713333025+intron-Distal,intron-Proximal3.3871510.69557K562FUS
chrX1333339913333453+intron-Distal4.9475742.89235K562TARDBP
chrX1333538613335448+intron-Distal3.3965816.05608K562TIA1
chrX1333187313331910+intron-Distal3.187356.89776K562HNRNPC
chrX1333325113333291+intron-Distal,intron-Proximal3.998928.75599K562FUS
chrX1333167313331743+intron-Distal3.7441317.49068K562KHSRP
chrX1333345913333506+intron-Distal4.699066.75032K562TARDBP
chrX1332940213329474+intron-Distal3.424428.93111K562TAF15
chrX1332919513329241+intron-Proximal3.6225112.79553K562TAF15
chrX1333087913330933+intron-Proximal4.082239.48320K562U2AF2
chrX1332919013329225+intron-Proximal4.066556.95398K562SRSF1
chrX1333277413332802+intron-Proximal4.669955.31925K562U2AF2
chrX1333708213337105+intron-Proximal3.5633011.56901K562KHSRP
chrX1332990113329917+intron-Proximal3.011304.79107K562SRSF1
chrX1333082213330878+intron-Proximal4.4961623.09636K562SF3B4
chrX1333132413331396+intron-Proximal3.219849.49165K562SMNDC1
chrX1332982913329872+intron-Proximal3.137466.58309K562SRSF1
chrX1333276513332804+intron-Proximal3.145604.76195K562U2AF1
chrX1333702713337075+intron-Proximal5.0541616.50946K562U2AF2
chrX1333098913331056+intron-Proximal3.9238522.84771K562PRPF8
chrX1333014513330185+intron-Proximal3.320857.36292K562U2AF2
chrX1333459213334655+intron-Proximal3.9083517.27386K562KHSRP
chrX1333127113331349+intron-Proximal4.6422617.94548K562SRSF1
chrX1333466813334735+intron-Proximal3.042416.03937K562SF3B4
chrX1333703113337101+intron-Proximal4.7216219.44639K562TIA1
chrX1333080313330864+intron-Proximal5.278797.97468K562RBM22
chrX1333101413331075+intron-Proximal5.2749716.95397K562RBM22
chrX1333094713331007+intron-Proximal3.8139612.83699K562EFTUD2
chrX1333001113330040+intron-Proximal3.473564.05508K562U2AF1
chrX1333310913333207+intron-Proximal3.066679.46173K562FUS
chrX1333773513337761+intron-Proximal4.609224.84906K562U2AF1
chrX1333275413332792+intron-Proximal3.424024.67419K562FUS
chrX1333014313330184+intron-Proximal3.878296.12784K562U2AF1
chrX1333303813333109+intron-Proximal4.0235012.61255K562FUS
chrX1332976213329807+intron-Proximal6.2552730.36831K562SF3B4
chrX1333106913331113+intron-Proximal4.5889421.32518K562EFTUD2
chrX1333083313330931+intron-Proximal5.6507727.15511K562SMNDC1
chrX1332981013329870+intron-Proximal4.6195115.56480K562U2AF1
chrX1333132513331391+intron-Proximal5.5267551.12411K562SF3B4
chrX1333763413337681+intron-Proximal3.512705.72015K562TIA1
chrX1333310513333148+intron-Proximal3.322633.51298K562AKAP8L
chrX1333106613331129+intron-Proximal4.7600924.03112K562PRPF8
chrX1333138013331428+intron-Proximal3.501405.63961K562U2AF2
chrX1333072113330770+intron-Proximal3.038178.72239K562UCHL5
chrX1333254813332626+intron-Proximal3.6962811.11680K562SMNDC1
chrX1333773213337766+intron-Proximal3.441556.02138K562U2AF2
chrX1333355613333598+intron-Proximal3.430518.89140K562TAF15
chrX1333101413331069+intron-Proximal4.8858235.91869K562EFTUD2
chrX1332924113329291+intron-Proximal3.965238.82001K562TAF15
chrX1333698113337023+intron-Proximal4.966147.35603K562TIA1
chrX1333689313336931+intron-Proximal3.297996.41279K562U2AF2
chrX1332980713329850+intron-Proximal3.8743316.99848K562SF3B4
chrX1333101613331060+intron-Proximal4.4101112.25909K562SF3B4
chrX1333143313331469+intron-Proximal4.797597.13530K562SRSF1
chrX1333307413333221+intron-Proximal3.3471323.25911K562TAF15
chrX1333315013333204+intron-Proximal5.4684412.77219K562SRSF1
chrX1333685513336909+intron-Proximal3.9169134.16084K562KHSRP
chrX1333255313332607+intron-Proximal6.0990021.68562K562SF3B4
chrX1333080113330885+intron-Proximal4.6367636.72045K562EFTUD2
chrX1332987213329887+intron-Proximal4.004727.84934K562SRSF1
chrX1333107513331127+intron-Proximal4.3866310.10253K562U2AF2
chrX1333698713337008+intron-Proximal3.505105.78064K562KHSRP
chrX1333010713330188+intron-Proximal5.3147720.61996K562SF3B4
chrX1333080513330861+intron-Proximal4.477593.02324K562XRN2
chrX1333712313337169+intron-Proximal4.126585.84654K562U2AF1
chrX1332984213329887+intron-Proximal4.0566914.66922K562U2AF2
chrX1332980813329878+intron-Proximal4.3775611.94751K562SMNDC1
chrX1332981113329842+intron-Proximal4.2472919.54361K562U2AF2
chrX1333143113331490+intron-Proximal3.465764.23869K562GRWD1
chrX1333370613333754+intron-Proximal4.0826611.10602K562SRSF1
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for GS1-600G8.3 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for GS1-600G8.3 is not available on ENCORE database.

  • 31 RBPs can affect the levels of GS1-600G8.3.  








The Knockdown/knockout RNA-Seq assay for GS1-600G8.3 is not available on ENCORE database.





31 RBPs can affect the gene expression of GS1-600G8.3 :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
GS1-600G8.3ENSG00000231216.131.93110172.90100-2.4369017.9741016.65060K562AGGF1
GS1-600G8.3ENSG00000231216.141.33100189.98180-2.2006017.8999014.96420K562AKAP8
GS1-600G8.3ENSG00000231216.125.97090179.90880-2.7923021.8963019.73120K562AKAP8L
GS1-600G8.3ENSG00000231216.139.69020188.76290-2.2497019.2252016.60610K562ATP5C1
GS1-600G8.3ENSG00000231216.157.16850206.63430-1.8538015.6824012.98570K562CCDC124
GS1-600G8.3ENSG00000231216.182.20980202.86000-1.303104.064102.27170K562DDX19B
GS1-600G8.3ENSG00000231216.133.43900193.61050-2.5336022.9288020.07530K562DKC1
GS1-600G8.3ENSG00000231216.139.2339075.07660-0.936302.132001.32980K562EFTUD2
GS1-600G8.3ENSG00000231216.1149.4826094.709900.658302.554201.85790K562EIF2S2
GS1-600G8.3ENSG00000231216.161.84200116.30260-0.911203.169802.26040K562FIP1L1
GS1-600G8.3ENSG00000231216.1141.6562074.975300.917803.636602.57570K562FTO
GS1-600G8.3ENSG00000231216.1142.1072074.223600.936903.611302.94090K562HNRNPC
GS1-600G8.3ENSG00000231216.137.82340190.93700-2.3357018.3729015.50500K562KIF1C
GS1-600G8.3ENSG00000231216.144.42060182.76660-2.0407014.8025011.72760K562MAK16
GS1-600G8.3ENSG00000231216.133.21430213.89650-2.6870024.5793021.65370K562MBNL1
GS1-600G8.3ENSG00000231216.1196.17370113.192100.793304.181203.20500K562MTPAP
GS1-600G8.3ENSG00000231216.136.25430149.92520-2.048009.831007.77320K562NAA15
GS1-600G8.3ENSG00000231216.133.9786073.92070-1.121402.765501.47300K562NONO
GS1-600G8.3ENSG00000231216.133.8866073.09950-1.109102.818901.38220K562NUSAP1
GS1-600G8.3ENSG00000231216.189.2361048.853800.869102.299901.41190K562PCBP2
GS1-600G8.3ENSG00000231216.131.4846072.47490-1.202803.599901.94370K562PHF6
GS1-600G8.3ENSG00000231216.178.88390132.02680-0.743002.676901.87320K562PPIG
GS1-600G8.3ENSG00000231216.119.7916073.05760-1.884105.325604.28450K562PRPF8
GS1-600G8.3ENSG00000231216.123.5084066.55270-1.501303.862902.76780K562PSIP1
GS1-600G8.3ENSG00000231216.1123.3761053.351901.209405.335304.43940K562PTBP1
GS1-600G8.3ENSG00000231216.129.99980178.43820-2.5724017.1212015.81140K562PUS1
GS1-600G8.3ENSG00000231216.129.31350173.84620-2.5682019.3380017.73490K562RBM15
GS1-600G8.3ENSG00000231216.1121.5507049.866801.285305.714503.52900K562RBM34
GS1-600G8.3ENSG00000231216.127.4269074.43350-1.440404.032903.04370K562RPS19
GS1-600G8.3ENSG00000231216.121.1818074.71590-1.818605.127403.30830K562RRP9
GS1-600G8.3ENSG00000231216.151.44970180.89950-1.814005.808803.73930K562UTP18
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for GS1-600G8.3 is not available on ENCORE database.






No RBPs affect the alternative splcing events of GS1-600G8.3 on ENCORE database.





The Knockdown/knockout RNA-Seq assay for GS1-600G8.3 is not avaliable on ENCORE database.