FOXC1

General Information

Gene Name       : FOXC1
Gene ID             : ENSG00000054598.7
Essential Gene : No

Functions

Localization

Domains (AlphaFold: FOXC1)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878FOXC1ENSG00000054598.70.510.660.58ENCSR000AEF
HepG2FOXC1ENSG00000054598.70.701.100.90ENCSR985KAT
K562FOXC1ENSG00000054598.70.000.000.00ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for FOXC1 is not avaliable on ENCORE database.



Proteins bound to RNA

  • NO known proteins bind on FOXC1 RNA with finished eCLIP experiments on ENCORE database.





eCLIP assay for FOXC1 is not avaliable on ENCORE database.






NO known proteins are bound to FOXC1 RNA with finished eCLIP experiments on ENCORE database.





eCLIP assay for FOXC1 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for FOXC1 is not available on ENCORE database.

  • 50 RBPs can affect the levels of FOXC1.  








The Knockdown/knockout RNA-Seq assay for FOXC1 is not available on ENCORE database.





50 RBPs can affect the gene expression of FOXC1 :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
FOXC1ENSG00000054598.5133.7011045.722001.548003.323502.29440HepG2ABCF1
FOXC1ENSG00000054598.5133.7042033.762101.9855012.6291011.53160HepG2ACO1
FOXC1ENSG00000054598.5214.1128037.162802.5263017.3262016.11150HepG2AKAP1
FOXC1ENSG00000054598.570.2348030.744401.191802.863802.06600HepG2ASCC1
FOXC1ENSG00000054598.572.56510114.30860-0.655601.796201.30490HepG2BOP1
FOXC1ENSG00000054598.5105.8993061.064900.794202.617901.86720HepG2CALR
FOXC1ENSG00000054598.599.4418047.395001.069003.499702.79450HepG2CELF1
FOXC1ENSG00000054598.5114.5750035.589101.686706.705105.77270HepG2DDX3X
FOXC1ENSG00000054598.5232.34980119.173100.963103.943202.78690HepG2DDX59
FOXC1ENSG00000054598.567.7057030.595301.145902.562401.96730HepG2DDX6
FOXC1ENSG00000054598.510.7458029.38870-1.451501.807401.31580HepG2EIF2S1
FOXC1ENSG00000054598.584.2382034.655801.281303.637502.29670HepG2EIF2S2
FOXC1ENSG00000054598.5118.5195049.009301.273904.021502.94360HepG2EIF3D
FOXC1ENSG00000054598.5144.9953031.632402.1964010.420909.12980HepG2EIF4B
FOXC1ENSG00000054598.5246.7995046.160402.4185016.5865014.97050HepG2FIP1L1
FOXC1ENSG00000054598.567.6325030.401101.153502.798502.12940HepG2G3BP1
FOXC1ENSG00000054598.5179.57690118.979900.593802.023801.47120HepG2GPKOW
FOXC1ENSG00000054598.561.46610113.54340-0.885402.621902.00610HepG2HNRNPLL
FOXC1ENSG00000054598.581.6278031.827001.358703.961102.84260HepG2HNRNPM
FOXC1ENSG00000054598.586.2326053.857800.679001.875501.36700HepG2HNRNPU
FOXC1ENSG00000054598.555.9026097.60220-0.804002.190101.54160HepG2IGF2BP1
FOXC1ENSG00000054598.5152.9180030.895702.3072013.8673012.48740HepG2IGF2BP2
FOXC1ENSG00000054598.5158.8192029.020002.452203.487002.38160HepG2IGF2BP3
FOXC1ENSG00000054598.5191.9835099.255000.951704.104303.08900HepG2LARP4
FOXC1ENSG00000054598.5118.8811051.298201.212403.058801.95220HepG2METAP2
FOXC1ENSG00000054598.552.29250115.76780-1.146603.241902.18680HepG2MTPAP
FOXC1ENSG00000054598.581.5370033.753701.272303.437602.73480HepG2NCBP2
FOXC1ENSG00000054598.566.7380026.341101.341103.448601.87190HepG2NIP7
FOXC1ENSG00000054598.575.8876026.617401.511404.763504.08800HepG2PTBP1
FOXC1ENSG00000054598.5112.2132051.218801.131404.387803.67860HepG2PUM1
FOXC1ENSG00000054598.5172.7111051.188501.7544011.052809.76140HepG2PUM2
FOXC1ENSG00000054598.5149.8143047.615001.653606.649505.58230HepG2RAVER1
FOXC1ENSG00000054598.5147.2662055.921601.396807.587906.82870HepG2RBM22
FOXC1ENSG00000054598.579.1492035.135101.171602.613301.65040HepG2RBM27
FOXC1ENSG00000054598.5133.6304047.680801.486707.235306.29650HepG2RPS19
FOXC1ENSG00000054598.587.0566032.399601.425904.018203.06260HepG2RPS2
FOXC1ENSG00000054598.570.0101033.077501.081602.285301.31420HepG2RPS5
FOXC1ENSG00000054598.578.1698043.509800.845202.143101.54850HepG2SF3A3
FOXC1ENSG00000054598.574.2108027.714601.420904.033803.34150HepG2SF3B4
FOXC1ENSG00000054598.5214.2199058.954601.861305.590303.41860HepG2SFPQ
FOXC1ENSG00000054598.522.8558046.25040-1.016902.071001.44810HepG2SLBP
FOXC1ENSG00000054598.595.6903055.928700.774702.411601.80520HepG2SMN1
FOXC1ENSG00000054598.5113.7744063.163800.848903.072602.55380HepG2SRFBP1
FOXC1ENSG00000054598.574.8285028.927001.371103.668103.14280HepG2SRSF1
FOXC1ENSG00000054598.578.5686023.532801.739206.618105.83050HepG2SRSF9
FOXC1ENSG00000054598.583.6267052.324000.676401.717701.30380HepG2TIAL1
FOXC1ENSG00000054598.5165.9923039.467602.0723011.184009.89900HepG2U2AF1
FOXC1ENSG00000054598.589.2855037.253901.260904.289003.56930HepG2UTP3
FOXC1ENSG00000054598.518.7852046.02700-1.292902.644501.57920HepG2XPO5
FOXC1ENSG00000054598.5107.7035052.383101.039803.432302.25280HepG2XRCC6
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for FOXC1 is not available on ENCORE database.






No RBPs affect the alternative splcing events of FOXC1 on ENCORE database.





The Knockdown/knockout RNA-Seq assay for FOXC1 is not avaliable on ENCORE database.