EFNB1

General Information

Gene Name       : EFNB1
Gene ID             : ENSG00000090776.5
Essential Gene : No

Functions

Localization

Domains (AlphaFold: EFNB1)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878EFNB1ENSG00000090776.50.050.190.12ENCSR000AEF
HepG2EFNB1ENSG00000090776.54.912.643.78ENCSR985KAT
K562EFNB1ENSG00000090776.50.930.590.76ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for EFNB1 is not avaliable on ENCORE database.



Proteins bound to RNA

  • NO known proteins bind on EFNB1 RNA with finished eCLIP experiments on ENCORE database.





eCLIP assay for EFNB1 is not avaliable on ENCORE database.






NO known proteins are bound to EFNB1 RNA with finished eCLIP experiments on ENCORE database.





eCLIP assay for EFNB1 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for EFNB1 is not available on ENCORE database.

  • 49 RBPs can affect the levels of EFNB1.  








The Knockdown/knockout RNA-Seq assay for EFNB1 is not available on ENCORE database.





49 RBPs can affect the gene expression of EFNB1 :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
EFNB1ENSG00000090776.5275.64110174.793500.657002.694301.76360HepG2ABCF1
EFNB1ENSG00000090776.5237.27440158.328300.583503.039902.32520HepG2AUH
EFNB1ENSG00000090776.5327.86740182.938800.841705.863205.03110HepG2BOP1
EFNB1ENSG00000090776.5334.73070226.215900.565202.477801.56210HepG2CCAR1
EFNB1ENSG00000090776.5266.39200161.633000.720703.198502.49320HepG2CKAP4
EFNB1ENSG00000090776.5101.81180167.95400-0.722202.429701.77930HepG2CPSF6
EFNB1ENSG00000090776.5137.7363076.077600.856302.989401.92970HepG2YBX3
EFNB1ENSG00000090776.5185.1222076.990401.265607.028505.43290HepG2CSTF2
EFNB1ENSG00000090776.5136.3750074.747700.867403.283602.54810HepG2DDX21
EFNB1ENSG00000090776.5125.9041074.719700.752702.770602.06750HepG2DNAJC21
EFNB1ENSG00000090776.5110.8147074.034900.581801.900701.34160HepG2DNAJC2
EFNB1ENSG00000090776.5176.2860080.564801.129605.579604.30130HepG2GEMIN5
EFNB1ENSG00000090776.5138.4990060.897701.185304.715603.27480HepG2GRSF1
EFNB1ENSG00000090776.5151.4377083.899500.851903.104102.37500HepG2HNRNPC
EFNB1ENSG00000090776.5158.6789083.345400.928804.845204.06110HepG2HNRNPU
EFNB1ENSG00000090776.5243.04650127.157400.934503.111702.40080HepG2IGF2BP2
EFNB1ENSG00000090776.5332.37060135.733801.291906.789005.83460HepG2MATR3
EFNB1ENSG00000090776.5196.78750112.604100.805302.300701.31500HepG2NONO
EFNB1ENSG00000090776.5133.8332074.338900.848103.014202.24810HepG2PPIL4
EFNB1ENSG00000090776.5299.83580131.855901.1851010.187509.14200HepG2PUF60
EFNB1ENSG00000090776.5247.68590139.870900.824305.169404.26570HepG2PUM2
EFNB1ENSG00000090776.531.4977083.56310-1.407603.215502.45880HepG2RAVER1
EFNB1ENSG00000090776.5391.00260151.947201.3635016.1641015.12190HepG2RBM22
EFNB1ENSG00000090776.5336.45510164.117301.035608.331407.24590HepG2RPLP0
EFNB1ENSG00000090776.5386.8369088.058602.1351028.5733026.94600HepG2RPS19
EFNB1ENSG00000090776.5141.5051066.131301.097304.345103.34210HepG2RPS3A
EFNB1ENSG00000090776.5128.1417074.227600.787603.106002.43150HepG2SAFB2
EFNB1ENSG00000090776.5185.8315050.105801.890805.777003.68530HepG2SF1
EFNB1ENSG00000090776.5155.2122048.727601.671304.186702.34060HepG2SFPQ
EFNB1ENSG00000090776.5139.9805086.570200.693202.798002.15110HepG2SMN1
EFNB1ENSG00000090776.582.57190200.12570-1.277205.751304.61590HepG2SNRNP70
EFNB1ENSG00000090776.5230.80920171.612300.427401.758001.33080HepG2SRFBP1
EFNB1ENSG00000090776.5279.92120130.195801.1042010.102109.00730HepG2SRSF5
EFNB1ENSG00000090776.555.34430117.54240-1.086704.785004.09620HepG2SRSF9
EFNB1ENSG00000090776.5248.83050148.062200.748905.005604.21120HepG2SUCLG1
EFNB1ENSG00000090776.533.39460122.02300-1.869508.272307.20450HepG2SUPV3L1
EFNB1ENSG00000090776.5432.8188081.016802.4174041.4974039.98290HepG2TIAL1
EFNB1ENSG00000090776.5133.9635081.707600.713202.868902.29790HepG2TRIM56
EFNB1ENSG00000090776.5139.8096052.070601.424803.147702.09460HepG2U2AF2
EFNB1ENSG00000090776.5260.99720173.919300.585503.361602.71370HepG2UTP3
EFNB1ENSG00000090776.5188.48700129.593400.540402.391001.76080HepG2ZC3H8
EFNB1ENSG00000090776.5146.88470198.12100-0.431701.851201.37940HepG2ZNF622
EFNB1ENSG00000090776.5104.7726043.998601.251604.720504.01310K562AGGF1
EFNB1ENSG00000090776.582.8161045.781700.855002.205701.62090K562AKAP8L
EFNB1ENSG00000090776.511.5233034.41650-1.578502.361701.56280K562BOP1
EFNB1ENSG00000090776.546.1552086.98210-0.914202.540001.60620K562CELF1
EFNB1ENSG00000090776.51.1235011.19830-3.317302.108501.50280K562G3BP2
EFNB1ENSG00000090776.529.8316059.67410-1.000302.021401.31140K562PCBP3
EFNB1ENSG00000090776.565.7917030.200701.123202.635901.75710K562PSIP1
EFNB1ENSG00000090776.557.6547026.105701.143002.431201.48590K562SRFBP1
EFNB1ENSG00000090776.533.0902063.39450-0.938002.072201.44430K562UPF1
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for EFNB1 is not available on ENCORE database.






No RBPs affect the alternative splcing events of EFNB1 on ENCORE database.





The Knockdown/knockout RNA-Seq assay for EFNB1 is not avaliable on ENCORE database.