EFHD1

General Information

Gene Name       : EFHD1
Gene ID             : ENSG00000115468.11
Essential Gene : No

Functions

Localization

Domains (AlphaFold: EFHD1)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878EFHD1ENSG00000115468.110.000.050.03ENCSR000AEF
HepG2EFHD1ENSG00000115468.110.820.730.77ENCSR985KAT
K562EFHD1ENSG00000115468.114.256.095.17ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for EFHD1 is not avaliable on ENCORE database.



Proteins bound to RNA

  • NO known proteins bind on EFHD1 RNA with finished eCLIP experiments on ENCORE database.





eCLIP assay for EFHD1 is not avaliable on ENCORE database.






NO known proteins are bound to EFHD1 RNA with finished eCLIP experiments on ENCORE database.





eCLIP assay for EFHD1 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for EFHD1 is not available on ENCORE database.

  • 35 RBPs can affect the levels of EFHD1.  








The Knockdown/knockout RNA-Seq assay for EFHD1 is not available on ENCORE database.





35 RBPs can affect the gene expression of EFHD1 :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
EFHD1ENSG00000115468.771.869204.914803.8701012.7274011.44880HepG2GPKOW
EFHD1ENSG00000115468.747.213206.220702.924007.314906.40520HepG2PUF60
EFHD1ENSG00000115468.729.049706.598502.138203.169002.45080HepG2PUM2
EFHD1ENSG00000115468.776.004409.741402.963808.819108.08260HepG2SRSF1
EFHD1ENSG00000115468.756.338603.619603.9601012.3237011.39250HepG2SSB
EFHD1ENSG00000115468.737.224608.353102.155802.726402.03120HepG2UPF1
EFHD1ENSG00000115468.7572.01000305.708800.9038011.7821010.70510K562AGGF1
EFHD1ENSG00000115468.7457.64100335.906400.446102.641801.68770K562AKAP8
EFHD1ENSG00000115468.734.9912073.81290-1.076902.707801.47960K562APOBEC3C
EFHD1ENSG00000115468.7238.48450333.75210-0.484903.004102.05350K562ATP5C1
EFHD1ENSG00000115468.7256.39060365.35590-0.511003.295901.99370K562CCDC124
EFHD1ENSG00000115468.723.2807074.85970-1.685105.787104.89560K562DDX47
EFHD1ENSG00000115468.7554.94130342.329900.696807.497905.92840K562DKC1
EFHD1ENSG00000115468.7205.3471043.369902.2432020.3985018.71020K562EIF2S2
EFHD1ENSG00000115468.710.5696038.83320-1.877402.633601.65730K562EIF3A
EFHD1ENSG00000115468.710.8898032.62510-1.583002.450001.69960K562EIF3G
EFHD1ENSG00000115468.736.2442083.65260-1.206703.975302.85340K562EIF4G2
EFHD1ENSG00000115468.732.0166083.59850-1.384704.554103.80460K562FXR1
EFHD1ENSG00000115468.7122.4854057.780201.083903.566202.71220K562GRSF1
EFHD1ENSG00000115468.7309.15180144.068401.101504.726802.99540K562HNRNPA2B1
EFHD1ENSG00000115468.7373.89050154.969801.270504.918102.00490K562HNRNPUL1
EFHD1ENSG00000115468.7482.7993070.966502.7661031.5944029.26840K562HSPD1
EFHD1ENSG00000115468.7118.6871061.757700.942402.581401.79930K562MTPAP
EFHD1ENSG00000115468.7244.64930126.005800.957103.325202.21160K562PABPN1
EFHD1ENSG00000115468.798.2789059.426600.725702.108801.39620K562PPIG
EFHD1ENSG00000115468.7387.86300149.793801.372506.883904.21370K562PPP1R8
EFHD1ENSG00000115468.799.2965047.681501.058202.671701.78550K562PSIP1
EFHD1ENSG00000115468.7148.9014095.119700.646402.236201.37140K562PUM2
EFHD1ENSG00000115468.7217.86700315.50420-0.534202.596502.06680K562PUS1
EFHD1ENSG00000115468.724.5389059.35680-1.274303.295402.09140K562NELFE
EFHD1ENSG00000115468.7240.98930132.344000.864602.666201.46920K562SNRNP200
EFHD1ENSG00000115468.736.5215069.37720-0.925702.236501.38560K562SRPK2
EFHD1ENSG00000115468.793.2142033.653701.469705.397303.49920K562SSB
EFHD1ENSG00000115468.7302.45320158.295900.934003.291101.69380K562SUPT6H
EFHD1ENSG00000115468.7106.8455045.852101.220404.068002.91660K562TIAL1
EFHD1ENSG00000115468.744.7900093.08020-1.055303.352501.94480K562TROVE2
EFHD1ENSG00000115468.7299.26000155.739400.942203.301101.52050K562YTHDC2
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for EFHD1 is not available on ENCORE database.






No RBPs affect the alternative splcing events of EFHD1 on ENCORE database.





The Knockdown/knockout RNA-Seq assay for EFHD1 is not avaliable on ENCORE database.