CTC-786C10.1

General Information

Gene Name       : CTC-786C10.1
Gene ID             :
Essential Gene : No

Functions

Localization

Domains (AlphaFold: CTC-786C10.1)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for CTC-786C10.1 is not avaliable on ENCORE database.



Proteins bound to RNA
  • CTC-786C10.1 RNA is bound by 14 proteins.  







eCLIP assay for CTC-786C10.1 is not avaliable on ENCORE database.





14 proteins are bound to CTC-786C10.1 RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr168521197885212039+intron-Distal4.331213.00997K562TAF15
chr168521252285212559+intron-Distal3.339983.14365K562NONO
chr168521251285212565+intron-Distal3.659043.93602K562EWSR1
chr168521173485211808+intron-Distal4.244473.28462K562TAF15
chr168521248785212583+intron-Distal4.534474.86316HepG2FAM120A
chr168521194585212050+intron-Distal4.112806.36039K562EWSR1
chr168521663585216693+intron-Distal4.3701817.18735K562AGGF1
chr168521656185216651+intron-Distal3.2817110.95012HepG2HNRNPL
chr168520801785208076+intron-Distal4.185064.10564HepG2CSTF2T
chr168520554585205706+intron-Distal4.210315.12925K562FUS
chr168521171985211797+intron-Distal3.076554.12222K562FUS
chr168521197585212042+intron-Distal4.795896.16396K562NONO
chr168520796385208072+intron-Distal4.066175.66214K562SLTM
chr168521504785215095+intron-Distal4.592414.16830K562EWSR1
chr168521249685212578+intron-Distal3.829293.34442K562FUS
chr168521633585216385+intron-Distal4.043174.10339HepG2CSTF2T
chr168521250685212580+intron-Distal3.279144.91491K562SLTM
chr168521672785216803+intron-Distal3.434979.02517HepG2HNRNPL
chr168521340185213444+intron-Distal4.409683.76710K562NONO
chr168521288385212940+intron-Distal3.513943.14365K562NONO
chr168521853285218654+intron-Distal,intron-Proximal4.555504.37030K562KHSRP
chr168521536385215423+intron-Distal4.513943.99137K562NONO
chr168520629185206388+intron-Distal4.982278.09947K562NONO
chr168521236585212407+intron-Distal4.108623.36882K562SLTM
chr168521236785212422+intron-Distal4.378094.43799HepG2CSTF2T
chr168521662685216681+intron-Distal3.998123.30705HepG2GTF2F1
chr168521192185212041+intron-Distal3.262293.78108K562FUS
chr168521656085216700+intron-Distal3.6940310.28916K562HNRNPL
chr168520793585208017+intron-Distal3.223823.92299HepG2CSTF2T
chr168521248385212570+intron-Distal3.138863.63246HepG2CSTF2T
chr168520713485207218+intron-Distal3.819745.61877K562NONO
chr168520854085208608+intron-Distal3.783953.79154K562FUS
chr168521595185215989+intron-Distal3.110263.14365K562NONO
chr168520931985209363+intron-Distal4.229263.53896K562NONO
chr168521680585216891+intron-Distal5.5176811.63976K562HNRNPL
chr168521615085216197+intron-Distal3.297133.06644K562GTF2F1
chr168520977085209835+intron-Distal5.116727.86458K562EWSR1
chr168521680385216901+intron-Distal3.8326614.45608HepG2HNRNPL
chr168521494085214993+intron-Distal3.432454.35339HepG2CSTF2T
chr168521683685216886+intron-Distal4.163315.24056K562GTF2F1
chr168521671685216809+intron-Distal3.7131621.85093K562AGGF1
chr168521686285216937+intron-Distal3.341747.93764HepG2XPO5
chr168521249185212573+intron-Distal4.444415.68315HepG2PRPF4
chr168521665185216708+intron-Distal3.9923610.74543HepG2HNRNPL
chr168521310885213162+intron-Distal3.913136.75450K562NONO
chr168521655485216631+intron-Distal4.5738922.32591K562AGGF1
chr168521681185216894+intron-Distal3.271263.15890HepG2GTF2F1
chr168521176785211807+intron-Distal4.053083.44758HepG2CSTF2T
chr168521029785210349+intron-Distal4.079313.44758HepG2CSTF2T
chr168521683485216923+intron-Distal3.810248.62536HepG2AGGF1
chr168521630385216406+intron-Distal3.493297.32016K562GTF2F1
chr168521717185217209+intron-Distal4.067193.30664K562NONO
chr168520799285208066+intron-Distal3.980344.52383K562FUS
chr168521248385212560+intron-Distal4.248754.49279K562DROSHA
chr168521673985216805+intron-Distal3.150933.91539K562HNRNPL
chr168521362685213689+intron-Distal3.279334.21158HepG2CSTF2T
chr168521250685212575+intron-Distal5.136175.84281K562GTF2F1
chr168521196785212033+intron-Distal3.401895.68177HepG2CSTF2T
chr168521680985216924+intron-Distal4.6449330.82930K562AGGF1
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for CTC-786C10.1 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for CTC-786C10.1 is not available on ENCORE database.

  • 19 RBPs can affect the levels of CTC-786C10.1.  








The Knockdown/knockout RNA-Seq assay for CTC-786C10.1 is not available on ENCORE database.





19 RBPs can affect the gene expression of CTC-786C10.1 :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
CTC-786C10.1ENSG00000262601.12.2717012.53040-2.463601.938401.41270HepG2ACO1
CTC-786C10.1ENSG00000262601.12.0445021.75350-3.411403.588502.99300HepG2AKAP1
CTC-786C10.1ENSG00000262601.140.3457017.208501.229201.972401.46240HepG2EIF2S1
CTC-786C10.1ENSG00000262601.15.0540019.01790-1.911901.863301.33470HepG2EIF4A3
CTC-786C10.1ENSG00000262601.13.4239018.51570-2.435002.117201.51200HepG2EIF4B
CTC-786C10.1ENSG00000262601.14.1600019.18680-2.205502.171301.55480HepG2FXR1
CTC-786C10.1ENSG00000262601.15.5144019.75600-1.841001.826001.30480HepG2NCBP2
CTC-786C10.1ENSG00000262601.10.5169013.18790-4.673103.226202.58030HepG2PCBP1
CTC-786C10.1ENSG00000262601.12.9647013.42360-2.178801.824901.36270HepG2PTBP1
CTC-786C10.1ENSG00000262601.12.7631014.93550-2.434401.889801.42360HepG2NELFE
CTC-786C10.1ENSG00000262601.14.9531020.99140-2.083402.617801.96190HepG2SF3A3
CTC-786C10.1ENSG00000262601.11.5809013.11640-3.052602.257501.74210HepG2TAF15
CTC-786C10.1ENSG00000262601.13.6665017.97320-2.293402.083501.54910HepG2UTP3
CTC-786C10.1ENSG00000262601.122.1346049.23570-1.153401.809501.31480K562AQR
CTC-786C10.1ENSG00000262601.127.261705.917302.203802.971801.89770K562IGF2BP2
CTC-786C10.1ENSG00000262601.122.249806.211301.840702.410501.62290K562MAGOH
CTC-786C10.1ENSG00000262601.125.045106.197502.014702.838501.90310K562MATR3
CTC-786C10.1ENSG00000262601.129.554406.035202.291803.977003.19540K562PTBP1
CTC-786C10.1ENSG00000262601.123.779606.086501.965902.658301.58970K562NELFE
CTC-786C10.1ENSG00000262601.120.278605.986901.760001.975001.36980K562TARDBP
CTC-786C10.1ENSG00000262601.125.494705.671902.168202.916501.78850K562TRA2A
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for CTC-786C10.1 is not available on ENCORE database.






No RBPs affect the alternative splcing events of CTC-786C10.1 on ENCORE database.





The Knockdown/knockout RNA-Seq assay for CTC-786C10.1 is not avaliable on ENCORE database.