RPL12

General Information

Gene Name : RPL12
Gene ID : ENSG00000197958.12
Essential Gene : Yes

Functions

Not Available

Localization

Not Available

Domains (AlphaFold: RPL12)

Not Available

Antibody Validation

Not Avaiable

Expression Level in Cell lines

Cell Line	Gene Name	Ensembl ID	Rep1 TPM	Rep2 TPM	Average TPM	Experiment ID
Gm12878	RPL12	ENSG00000197958.12	3109.19	3772.98	3441.09	ENCSR000AEF
HepG2	RPL12	ENSG00000197958.12	2235.35	2363.08	2299.22	ENCSR985KAT
K562	RPL12	ENSG00000197958.12	2947.56	3065.43	3006.49	ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.

eCLIP

No eCLIP experiment available

Antibody Validation

No Antibody Primary Validation image or Secondary image available

KD RNA-Seq

No KD RNA-Seq experiment available

RNA Bind-n-Seqn

No RBNS experiment available

Localization Image in HepG2

No Localization Information available

RBP	Antibody Info	Primary-HepG2	Secondary-HepG2	Primary-K562	Secondary-K562	Primary-UBERON	Primary-Hela

Summary
Proteins Bound to RBP RNA

RNA Targets

eCLIP assay for RPL12 is not avaliable on ENCORE database.

Proteins bound to RNA

RPL12 RNA is bound by 26 proteins.

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eCLIP assay for RPL12 is not avaliable on ENCORE database.

26 proteins are bound to RPL12 RNA:

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Search:

Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name
chr9	130210631	130210637	-	CDS,intron-Distal	3.80656	400.00000	K562	YBX3
chr9	130210624	130210628	-	CDS,intron-Distal	3.72873	400.00000	K562	YBX3
chr9	130210654	130210660	-	CDS,intron-Distal	3.59620	400.00000	K562	YBX3
chr9	130210223	130210241	-	CDS,intron-Distal	3.84805	400.00000	K562	YBX3
chr9	130210216	130210223	-	CDS,intron-Distal	3.20123	400.00000	K562	YBX3
chr9	130213013	130213047	-	CDS,intron-Distal	5.56833	400.00000	K562	METAP2
chr9	130210641	130210654	-	CDS,intron-Distal	3.87354	400.00000	K562	YBX3
chr9	130211610	130211638	-	CDS,intron-Distal	5.68282	400.00000	K562	METAP2
chr9	130211973	130211987	-	CDS,intron-Distal,intron-Proximal	5.23096	400.00000	K562	METAP2
chr9	130213047	130213080	-	CDS,intron-Distal	7.02496	400.00000	K562	METAP2
Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name

Showing 1 to 10 of 169 entries

eCLIP assay for RPL12 is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout assay for RPL12 is not available on ENCORE database.
141 RBPs can affect the levels of RPL12.

CanvasJS.com

The Knockdown/knockout RNA-Seq assay for RPL12 is not available on ENCORE database.

141 RBPs can affect the gene expression of RPL12 :

Show entries

Search:

Gene Name	Gene ID	KDMean	CNMean	log2(fold change) *	-log(pval) **	-log(padj) **	Cell Line	Affected by RBP	Bound by RBP
RPL12	ENSG00000197958.8	3337.33610	12098.82390	-1.85810	287.98010	284.97460	HepG2	ZNF622
RPL12	ENSG00000197958.8	8721.63500	22557.38140	-1.37090	143.44050	141.38230	HepG2	SRSF1
RPL12	ENSG00000197958.8	8208.81310	23101.15560	-1.49270	142.64700	140.33230	HepG2	NELFE
RPL12	ENSG00000197958.8	8527.98030	20757.82060	-1.28340	101.03140	98.93310	HepG2	PTBP1
RPL12	ENSG00000197958.8	8535.62790	22480.44810	-1.39710	84.03820	81.47180	HepG2	QKI
RPL12	ENSG00000197958.8	10191.72740	21610.91080	-1.08440	79.47090	77.17060	HepG2	SF3B4
RPL12	ENSG00000197958.8	4554.96330	21970.48900	-2.27010	77.36820	74.16170	HepG2	EIF4A3
RPL12	ENSG00000197958.8	8470.08130	16256.77980	-0.94060	62.34560	60.71340	HepG2	SSB
RPL12	ENSG00000197958.8	10498.73520	20399.69520	-0.95830	60.34300	58.19110	HepG2	PCBP1
RPL12	ENSG00000197958.8	6412.53080	22824.46240	-1.83160	59.53220	56.81570	HepG2	NCBP2
Gene Name	Gene ID	KDMean	CNMean	log2(fold change)	-log(pval)	-log(padj)	Cell Line	Affected by RBP	Bound by RBP

Showing 1 to 10 of 173 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

The Knockdown/knockout RNA-Seq assay for RPL12 is not available on ENCORE database.

15 RBPs can affect the splicing of RPL12 :

Show entries

Search:

Event Type	Gene Name	Gene ID	chr	Strand	ExonStart	ExonEnd	2ndExonStart	2ndExonEnd	upstreamES	upstreamEE	downstreamES	downstreamEE	dPSI	p-value	FDR	is_included	Cell Line	Affected by RBP
RI	RPL12	ENSG00000197958.8	chr9	-	130211888	130213684			130211888	130211987	130213559	130213684	0.16700	0.00000	0.00008	included	K562	SRSF1
RI	RPL12	ENSG00000197958.8	chr9	-	130211888	130213684			130211888	130211987	130213559	130213684	0.25500	0.00000	0.00000	included	K562	HNRNPA1
RI	RPL12	ENSG00000197958.8	chr9	-	130211888	130213684			130211888	130211987	130213559	130213684	0.40500	0.00004	0.00846	included	HepG2	DDX55
RI	RPL12	ENSG00000197958.8	chr9	-	130211888	130213684			130211888	130211987	130213559	130213684	-0.14700	0.00004	0.00087	excluded	K562	UTP18
RI	RPL12	ENSG00000197958.8	chr9	-	130211888	130213684			130211888	130211987	130213559	130213684	-0.44400	0.00008	0.03108	excluded	HepG2	SUGP2
RI	RPL12	ENSG00000197958.8	chr9	-	130211888	130213684			130211888	130211987	130213559	130213684	0.39400	0.00010	0.00795	included	HepG2	BCCIP
RI	RPL12	ENSG00000197958.8	chr9	-	130211888	130213684			130211888	130211987	130213559	130213684	0.15100	0.00010	0.01597	included	K562	ZC3H8
RI	RPL12	ENSG00000197958.8	chr9	-	130211888	130213684			130211888	130211987	130213559	130213684	0.10700	0.00014	0.04302	included	K562	PUM2
MXE	RPL12	ENSG00000197958.8	chr9	-	130210615	130210649	130211559	130211641	130210155	130210268	130211888	130211987	0.05400	0.00017	0.00661	1included	K562	SUPV3L1
A5SS	RPL12	ENSG00000197958.8	chr9	-	130213328	130213684			130213559	130213684	130211888	130211987	0.34200	0.00070	0.01371	longer	K562	AQR

Showing 1 to 10 of 18 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

RPL12

General Information

Functions

Localization

Domains (AlphaFold: RPL12)

Antibody Validation

Expression Level in Cell lines

Assays

RNA Targets

Proteins bound to RNA

eCLIP assay for RPL12 is not avaliable on ENCORE database.

26 proteins are bound to RPL12 RNA:

eCLIP assay for RPL12 is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout RNA-Seq assay for RPL12 is not available on ENCORE database.

141 RBPs can affect the gene expression of RPL12 :

The Knockdown/knockout RNA-Seq assay for RPL12 is not available on ENCORE database.

15 RBPs can affect the splicing of RPL12 :

The Knockdown/knockout RNA-Seq assay for RPL12 is not avaliable on ENCORE database.