ZC3H7A

General Information

Gene Name : ZC3H7A
Gene ID : ENSG00000122299.11
Essential Gene : No

Functions

Not Available

Localization

Not Available

Domains (AlphaFold: ZC3H7A)

Not Available

Antibody Validation

Not Avaiable

Expression Level in Cell lines

Cell Line	Gene Name	Ensembl ID	Rep1 TPM	Rep2 TPM	Average TPM	Experiment ID
Gm12878	ZC3H7A	ENSG00000122299.11	77.96	64.55	71.25	ENCSR000AEF
HepG2	ZC3H7A	ENSG00000122299.11	41.10	66.20	53.65	ENCSR985KAT
K562	ZC3H7A	ENSG00000122299.11	28.92	33.02	30.97	ENCSR000AEO

Assays

1 Released experiments are available on ENCORE database.

Assay Type	Exp_Name	ENCODE ID	Target label	Biosample	Status	Linked Antibody	Controls	Method	Note
knockdown followed by RNA-seq	ZC3H7A-BGRSLV08-RS293		ZC3H7A	Ribo-STAMP-293T	Released			shRNA	KD% = ,

eCLIP

No eCLIP experiment available

Antibody Validation

No Antibody Primary Validation image or Secondary image available

KD RNA-Seq

GeneName	Cell_Line	Method	Sample_reps	Control_reps	KD%	Status	Project
ZC3H7A	Ribo-STAMP-293T	shRNA	BGRSLV07-41,BGRSLV07-42	BGRSLV07-1,BGRSLV07-2		NotSatisfied	ENCORE2
ZC3H7A	Ribo-STAMP-293T	shRNA	ZC3H7A-BGRSLV08-7,ZC3H7A-BGRSLV08-8	NT-BGRSLV08-1,NT-BGRSLV08-2	,	Released	ENCORE2
ZC3H7A	293T	shRNA	BG293LV05-65,BG293LV05-66	BG293LV05-1,BG293LV05-2		NotSatisfied	ENCORE2
ZC3H7A	293T	shRNA	BG293LV05-67,BG293LV05-68	BG293LV05-1,BG293LV05-2		NotSatisfied	ENCORE2

RNA Bind-n-Seqn

No RBNS experiment available

Localization Image in HepG2

No Localization Information available

RBP	Antibody Info	Primary-HepG2	Secondary-HepG2	Primary-K562	Secondary-K562	Primary-UBERON	Primary-Hela

Summary
Proteins Bound to RBP RNA

RNA Targets

eCLIP assay for ZC3H7A is not avaliable on ENCORE database.

Proteins bound to RNA

ZC3H7A RNA is bound by 27 proteins.

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eCLIP assay for ZC3H7A is not avaliable on ENCORE database.

27 proteins are bound to ZC3H7A RNA:

Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name
chr16	11844501	11844564	-	3'-UTR,intron-Distal	4.98369	3.74454	K562	ZC3H11A
chr16	11862336	11862360	-	3'-UTR,CDS,intron-Distal,intron-Proximal	5.34436	7.95223	HepG2	BCLAF1
chr16	11846616	11846683	-	3'-UTR,CDS,intron-Distal	3.20367	5.74981	HepG2	GRWD1
chr16	11845318	11845348	-	3'-UTR,CDS,intron-Distal	3.52688	7.58656	HepG2	BCLAF1
chr16	11850166	11850223	-	3'-UTR,CDS,intron-Distal,intron-Proximal	3.56737	6.44455	K562	ZNF622
chr16	11859371	11859423	-	3'-UTR,CDS,intron-Distal,intron-Proximal	3.73288	9.08790	HepG2	BCLAF1
chr16	11844593	11844648	-	3'-UTR,intron-Distal	4.80857	5.29571	HepG2	FUBP3
chr16	11844579	11844646	-	3'-UTR,intron-Distal	3.24143	3.13224	HepG2	ZC3H11A
chr16	11861322	11861375	-	3'-UTR,CDS,intron-Distal	3.58034	8.47761	HepG2	BCLAF1
chr16	11845235	11845317	-	3'-UTR,CDS,intron-Distal	3.09459	5.11643	K562	ZNF622
chr16	11846641	11846758	-	3'-UTR,CDS,intron-Distal,intron-Proximal	3.55222	5.76243	HepG2	BUD13
chr16	11850056	11850124	-	3'-UTR,CDS,intron-Distal,intron-Proximal	4.78811	6.15361	K562	PRPF8
chr16	11845044	11845142	-	3'-UTR,intron-Distal	3.54232	5.15600	K562	LIN28B
chr16	11845319	11845359	-	3'-UTR,CDS,intron-Distal	4.12404	4.23295	HepG2	GRWD1
chr16	11846655	11846688	-	3'-UTR,CDS,intron-Distal	3.73288	9.08790	HepG2	BCLAF1
chr16	11850040	11850107	-	3'-UTR,CDS,intron-Distal,intron-Proximal	5.32022	5.05356	HepG2	PRPF8
chr16	11862169	11862278	-	3'-UTR,CDS,intron-Distal,intron-Proximal	3.94955	3.45225	K562	GRWD1
chr16	11861396	11861431	-	3'-UTR,CDS,intron-Distal	3.13585	6.09950	HepG2	BCLAF1
chr16	11859479	11859535	-	3'-UTR,CDS,intron-Distal,intron-Proximal	4.41674	4.78571	K562	UCHL5
chr16	11862290	11862370	-	3'-UTR,CDS,intron-Distal,intron-Proximal	3.48897	9.04979	HepG2	U2AF2
chr16	11859449	11859495	-	3'-UTR,CDS,intron-Distal,intron-Proximal	3.28992	7.33138	HepG2	BCLAF1
chr16	11876165	11876225	-	3'-UTR,5'-UTR,CDS,intron-Distal	4.26431	3.59941	K562	UCHL5
chr16	11862284	11862343	-	3'-UTR,CDS,intron-Distal	3.91238	3.15006	K562	RBM15
chr16	11862281	11862368	-	3'-UTR,CDS,intron-Distal,intron-Proximal	5.06375	8.54183	K562	U2AF2
chr16	11845265	11845318	-	3'-UTR,CDS,intron-Distal	3.34623	6.50801	HepG2	BCLAF1
chr16	11845131	11845177	-	3'-UTR,CDS,intron-Distal	3.71507	7.83567	HepG2	BCLAF1
chr16	11862172	11862278	-	3'-UTR,CDS,intron-Distal	3.27697	10.78542	K562	ZNF622
chr16	11850178	11850224	-	3'-UTR,CDS,intron-Distal,intron-Proximal	3.86707	7.58784	HepG2	BCLAF1
chr16	11862304	11862367	-	3'-UTR,CDS,intron-Distal,intron-Proximal	4.48374	4.10407	K562	U2AF1
chr16	11850092	11850129	-	3'-UTR,CDS,intron-Distal,intron-Proximal	4.56898	7.97334	HepG2	BCLAF1
chr16	11844465	11844579	-	3'-UTR,intron-Distal	3.47806	7.73756	HepG2	ZC3H11A
chr16	11861271	11861309	-	3'-UTR,CDS,intron-Distal,intron-Proximal	5.71038	11.85134	HepG2	BCLAF1
chr16	11850155	11850226	-	3'-UTR,CDS,intron-Distal,intron-Proximal	3.39196	5.85200	K562	BUD13
chr16	11859514	11859535	-	3'-UTR,CDS,intron-Distal,intron-Proximal	5.16530	7.39496	HepG2	BCLAF1
chr16	11890956	11890981	-	5'-UTR,intron-Distal	3.70741	3.15251	HepG2	EFTUD2
chr16	11852379	11852450	-	5'-UTR,CDS,intron-Distal,intron-Proximal	3.50497	4.57435	K562	SF3B4
chr16	11890939	11891010	-	5'-UTR,intron-Distal	3.86932	10.32997	HepG2	PRPF8
chr16	11852292	11852313	-	5'-UTR,CDS,intron-Distal	3.56588	6.36847	HepG2	BCLAF1
chr16	11890740	11890785	-	5'-UTR,intron-Distal	3.09779	4.76495	HepG2	XRN2
chr16	11890739	11890775	-	5'-UTR,intron-Distal	3.07680	4.59930	HepG2	NKRF
chr16	11890797	11890857	-	5'-UTR,intron-Distal,intron-Proximal	4.88753	10.43503	HepG2	EFTUD2
chr16	11890936	11890994	-	5'-UTR,intron-Distal	3.60854	3.96535	HepG2	AQR
chr16	11852845	11852943	-	5'-UTR,intron-Distal	4.06296	4.24478	HepG2	CSTF2
chr16	11864731	11864809	-	CDS,intron-Distal,intron-Proximal	3.49491	3.93112	K562	RBM15
chr16	11875219	11875338	-	CDS,intron-Distal,intron-Proximal	3.28138	7.02925	K562	AQR
chr16	11873108	11873161	-	CDS,intron-Distal,intron-Proximal	4.18227	9.80976	HepG2	BCLAF1
chr16	11868832	11868889	-	CDS,intron-Distal,intron-Proximal	4.46629	4.92499	HepG2	AQR
chr16	11870306	11870367	-	CDS,intron-Distal,intron-Proximal	4.85982	9.30195	HepG2	BCLAF1
chr16	11856532	11856600	-	CDS,intron-Distal	3.53378	8.50351	HepG2	BCLAF1
chr16	11855321	11855400	-	CDS,intron-Distal,intron-Proximal	3.44066	4.84423	K562	U2AF2
chr16	11857328	11857411	-	CDS,intron-Distal,intron-Proximal	3.00853	14.74239	HepG2	BCLAF1
chr16	11859304	11859352	-	CDS,intron-Distal,intron-Proximal	4.60196	4.35676	HepG2	PRPF8
chr16	11855330	11855425	-	CDS,intron-Distal,intron-Proximal	4.18307	13.77796	HepG2	U2AF2
chr16	11855765	11855857	-	CDS,intron-Distal,intron-Proximal	3.92226	17.16359	HepG2	BCLAF1
chr16	11876143	11876151	-	CDS,intron-Distal	3.58034	5.76104	HepG2	BCLAF1
chr16	11855799	11855858	-	CDS,intron-Distal,intron-Proximal	3.71856	4.79276	K562	ZNF622
chr16	11857329	11857427	-	CDS,intron-Distal,intron-Proximal	3.64111	3.40928	HepG2	UCHL5
chr16	11870607	11870662	-	CDS,intron-Distal,intron-Proximal	3.43056	8.50351	HepG2	BCLAF1
chr16	11873033	11873082	-	CDS,intron-Distal,intron-Proximal	4.94430	11.09109	HepG2	BCLAF1
chr16	11875236	11875322	-	CDS,intron-Distal,intron-Proximal	3.54494	7.85990	HepG2	PRPF8
chr16	11870378	11870387	-	CDS,intron-Distal,intron-Proximal	3.48238	5.15776	HepG2	BCLAF1
chr16	11868202	11868264	-	CDS,intron-Distal,intron-Proximal	3.49125	4.68928	K562	RBM15
chr16	11870748	11870766	-	CDS,intron-Distal,intron-Proximal	3.31936	4.61799	HepG2	BCLAF1
chr16	11875273	11875322	-	CDS,intron-Distal,intron-Proximal	4.49992	5.94114	HepG2	BUD13
chr16	11870175	11870212	-	CDS,intron-Distal,intron-Proximal	3.95443	10.98590	HepG2	BCLAF1
chr16	11868268	11868362	-	CDS,intron-Distal	3.17349	3.86335	K562	SF3B4
chr16	11868368	11868424	-	CDS,intron-Distal,intron-Proximal	4.79891	4.90235	K562	SF3B4
chr16	11862850	11862891	-	CDS,intron-Distal,intron-Proximal	4.28120	4.22101	K562	PRPF8
chr16	11868348	11868400	-	CDS,intron-Distal,intron-Proximal	4.81211	5.17615	K562	AQR
chr16	11868273	11868325	-	CDS,intron-Distal	3.39536	9.25770	HepG2	BCLAF1
chr16	11875279	11875321	-	CDS,intron-Distal,intron-Proximal	3.96937	6.36347	HepG2	PPIG
chr16	11855266	11855326	-	CDS,intron-Distal,intron-Proximal	4.66849	7.17283	HepG2	GRWD1
chr16	11858983	11859006	-	CDS,intron-Distal	4.28866	7.16838	HepG2	BCLAF1
chr16	11862848	11862893	-	CDS,intron-Distal,intron-Proximal	3.51549	3.43910	HepG2	PRPF8
chr16	11854633	11854708	-	intron-Distal	4.13523	3.45317	HepG2	HNRNPL
chr16	11890440	11890507	-	intron-Distal,intron-Proximal	3.22464	10.04534	HepG2	EFTUD2
chr16	11888900	11888959	-	intron-Distal	4.16509	5.95943	HepG2	HNRNPM
chr16	11890932	11890956	-	intron-Distal	3.45607	5.32491	HepG2	EFTUD2
chr16	11870034	11870082	-	intron-Distal,intron-Proximal	4.18488	3.89565	K562	PRPF8
chr16	11873631	11873691	-	intron-Distal	4.46326	11.19329	HepG2	HNRNPL
chr16	11862828	11862887	-	intron-Distal,intron-Proximal	4.22183	4.52312	K562	AQR
chr16	11855459	11855538	-	intron-Distal,intron-Proximal	3.33466	3.76553	K562	PRPF8
chr16	11883847	11883939	-	intron-Distal	3.22125	3.20171	HepG2	ILF3
chr16	11855945	11856019	-	intron-Distal,intron-Proximal	3.30812	3.68839	K562	KHSRP
chr16	11868669	11868808	-	intron-Distal,intron-Proximal	3.12887	3.73266	K562	KHSRP
chr16	11862814	11862875	-	intron-Distal,intron-Proximal	3.14929	3.07751	K562	KHSRP
chr16	11890428	11890510	-	intron-Distal,intron-Proximal	3.40648	5.68664	HepG2	XRN2
chr16	11890505	11890517	-	intron-Distal	3.04677	4.99788	HepG2	NKRF
chr16	11890573	11890603	-	intron-Distal	3.16807	5.17507	HepG2	NKRF
chr16	11888815	11888891	-	intron-Distal	4.18094	3.34609	K562	TARDBP
chr16	11873626	11873712	-	intron-Distal	3.90400	4.02823	K562	HNRNPL
chr16	11890428	11890472	-	intron-Distal,intron-Proximal	3.11581	8.43319	HepG2	NKRF
chr16	11856471	11856507	-	intron-Distal,intron-Proximal	4.03078	3.54514	K562	TIA1
chr16	11852230	11852284	-	intron-Distal,intron-Proximal	4.12363	5.63763	K562	AQR
chr16	11882814	11882895	-	intron-Distal	4.48593	5.18738	K562	TARDBP
chr16	11890888	11890932	-	intron-Distal,intron-Proximal	3.94769	6.99200	HepG2	EFTUD2
chr16	11889566	11889636	-	intron-Distal	4.10633	5.00436	HepG2	CSTF2
chr16	11884720	11884739	-	intron-Distal	3.07494	3.00589	HepG2	HNRNPC
chr16	11880341	11880460	-	intron-Distal	3.51689	4.98044	HepG2	CSTF2
chr16	11885502	11885564	-	intron-Distal	4.10809	3.65854	HepG2	RBFOX2
chr16	11861475	11861532	-	intron-Distal,intron-Proximal	3.75180	3.42844	K562	KHSRP
chr16	11890569	11890604	-	intron-Distal	4.19896	5.49785	HepG2	XRN2
Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name

eCLIP assay for ZC3H7A is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout assay for ZC3H7A is not available on ENCORE database.
63 RBPs can affect the levels of ZC3H7A.

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The Knockdown/knockout RNA-Seq assay for ZC3H7A is not available on ENCORE database.

63 RBPs can affect the gene expression of ZC3H7A :

Gene Name	Gene ID	KDMean	CNMean	log2(fold change) *	-log(pval) **	-log(padj) **	Cell Line	Affected by RBP	Bound by RBP
ZC3H7A	ENSG00000122299.7	1330.73190	1811.78230	-0.44520	2.23510	1.55340	HepG2	CNOT7
ZC3H7A	ENSG00000122299.7	1987.42240	2405.87840	-0.27570	4.83620	3.89680	HepG2	DAZAP1
ZC3H7A	ENSG00000122299.7	1306.17960	1766.60950	-0.43560	3.42920	2.74140	HepG2	DDX3X
ZC3H7A	ENSG00000122299.7	1075.77740	1517.32570	-0.49620	3.71900	3.01220	HepG2	DDX6
ZC3H7A	ENSG00000122299.7	1212.96680	1465.15610	-0.27250	2.70600	2.00800	HepG2	DNAJC21
ZC3H7A	ENSG00000122299.7	1187.92830	1452.12280	-0.28970	3.96400	3.21110	HepG2	DNAJC2
ZC3H7A	ENSG00000122299.7	1913.21950	1498.59370	0.35230	2.73490	1.81860	HepG2	EEF2
ZC3H7A	ENSG00000122299.7	2343.65980	1569.62130	0.57820	4.33790	3.48880	HepG2	EIF4B
ZC3H7A	ENSG00000122299.7	1868.20430	2273.60600	-0.28330	2.15670	1.43050	HepG2	EIF4G2
ZC3H7A	ENSG00000122299.7	1483.98180	984.89970	0.59130	7.60810	6.34150	HepG2	FUBP3
ZC3H7A	ENSG00000122299.7	2067.63660	1508.93860	0.45430	3.73540	2.96560	HepG2	G3BP1
ZC3H7A	ENSG00000122299.7	2291.04950	1601.70370	0.51630	5.31050	4.06450	HepG2	G3BP2
ZC3H7A	ENSG00000122299.7	1259.74050	2016.09490	-0.67840	6.55110	5.59340	HepG2	GPKOW
ZC3H7A	ENSG00000122299.7	1576.29920	1876.27940	-0.25130	2.95210	2.21220	HepG2	HNRNPF
ZC3H7A	ENSG00000122299.7	2115.73310	1527.52960	0.46990	4.84760	3.94320	HepG2	HNRNPK
ZC3H7A	ENSG00000122299.7	1921.82730	2191.61620	-0.18950	2.50210	1.85830	HepG2	HNRNPL
ZC3H7A	ENSG00000122299.7	1410.64630	1634.42020	-0.21240	2.19230	1.64600	HepG2	HNRNPU
ZC3H7A	ENSG00000122299.7	1965.79790	1533.86520	0.35780	2.74700	2.07390	HepG2	IGF2BP2
ZC3H7A	ENSG00000122299.7	2205.91800	1627.00900	0.43910	3.71370	2.95340	HepG2	MAGOH
ZC3H7A	ENSG00000122299.7	1298.17550	1674.75400	-0.36750	2.49250	1.88980	HepG2	NCBP2
ZC3H7A	ENSG00000122299.7	1227.86990	1457.77770	-0.24760	2.27870	1.60310	HepG2	PPIL4
ZC3H7A	ENSG00000122299.7	1713.40670	1505.12250	0.18690	1.92640	1.45430	HepG2	PTBP1
ZC3H7A	ENSG00000122299.7	1823.12970	2277.27610	-0.32090	3.05820	2.43690	HepG2	PUF60
ZC3H7A	ENSG00000122299.7	1907.12040	1628.97080	0.22730	2.73930	2.12570	HepG2	PUS1
ZC3H7A	ENSG00000122299.7	1905.59400	1629.90850	0.22530	2.07320	1.52100	HepG2	QKI
ZC3H7A	ENSG00000122299.7	1080.83910	1680.04060	-0.63630	2.51240	1.83940	HepG2	RAVER1
ZC3H7A	ENSG00000122299.7	2099.39900	2412.50280	-0.20060	2.00920	1.54900	HepG2	RBM22
ZC3H7A	ENSG00000122299.7	2029.10020	1674.98810	0.27660	3.51470	2.92070	HepG2	NELFE
ZC3H7A	ENSG00000122299.7	2036.00650	1560.14840	0.38400	6.38070	5.49970	HepG2	RECQL
ZC3H7A	ENSG00000122299.7	1092.01280	1904.44240	-0.80240	8.72070	7.53540	HepG2	SF3B1
ZC3H7A	ENSG00000122299.7	2111.72220	2724.79100	-0.36770	7.16150	6.45900	HepG2	SRFBP1
ZC3H7A	ENSG00000122299.7	2654.88460	1635.54240	0.69880	21.58610	20.52990	HepG2	SRSF1
ZC3H7A	ENSG00000122299.7	1524.95400	1843.39330	-0.27360	3.49800	2.72850	HepG2	SRSF7
ZC3H7A	ENSG00000122299.7	1657.25970	1330.65300	0.31660	4.54740	3.87270	HepG2	SRSF9
ZC3H7A	ENSG00000122299.7	2879.94900	2365.69010	0.28370	4.35620	3.74290	HepG2	SSB
ZC3H7A	ENSG00000122299.7	1845.53060	1448.23400	0.34960	2.19750	1.58480	HepG2	SUPV3L1
ZC3H7A	ENSG00000122299.7	2265.53320	1470.25730	0.62370	13.33600	12.24290	HepG2	TAF15
ZC3H7A	ENSG00000122299.7	1772.78590	1350.78790	0.39210	4.44780	3.39580	HepG2	TIA1
ZC3H7A	ENSG00000122299.7	1316.26710	1602.33380	-0.28370	3.52700	2.90730	HepG2	TRIM56
ZC3H7A	ENSG00000122299.7	1137.88570	2282.14630	-1.00400	3.27120	2.19750	HepG2	U2AF2
ZC3H7A	ENSG00000122299.7	1331.99010	1741.41600	-0.38670	6.14750	5.31340	HepG2	UTP3
ZC3H7A	ENSG00000122299.7	1782.76550	1516.06290	0.23370	2.90870	2.22290	HepG2	ZC3H8
ZC3H7A	ENSG00000122299.7	1768.16640	1983.74110	-0.16600	1.91120	1.43390	HepG2	ZNF622
ZC3H7A	ENSG00000122299.7	2307.93990	2020.66750	0.19170	2.10770	1.60040	K562	AGGF1
ZC3H7A	ENSG00000122299.7	3004.60490	1971.73810	0.60760	8.27800	7.35120	K562	AQR
ZC3H7A	ENSG00000122299.7	3715.35230	3178.92990	0.22490	2.27590	1.39100	K562	CELF1
ZC3H7A	ENSG00000122299.7	2373.81040	1969.74660	0.26910	3.49420	2.77380	K562	DDX47
ZC3H7A	ENSG00000122299.7	1554.62180	1072.09940	0.53600	4.15870	2.55590	K562	EEF2
ZC3H7A	ENSG00000122299.7	733.85430	1035.94290	-0.49740	4.01670	2.90020	K562	EFTUD2
ZC3H7A	ENSG00000122299.7	2115.19050	1399.14080	0.59610	4.80880	3.81740	K562	G3BP2
ZC3H7A	ENSG00000122299.7	894.59460	1224.49260	-0.45290	4.33050	3.34380	K562	GPKOW
ZC3H7A	ENSG00000122299.7	1057.05570	1843.86570	-0.80270	14.23030	12.48960	K562	GRSF1
ZC3H7A	ENSG00000122299.7	783.17300	1084.07490	-0.46910	4.37930	3.64520	K562	HNRNPC
ZC3H7A	ENSG00000122299.7	1439.84540	1780.06960	-0.30600	2.66090	1.62820	K562	HNRNPL
ZC3H7A	ENSG00000122299.7	1006.23630	1371.10900	-0.44640	5.65620	4.36730	K562	HNRNPU
ZC3H7A	ENSG00000122299.7	1193.73400	1506.13650	-0.33540	2.95340	2.08500	K562	MAGOH
ZC3H7A	ENSG00000122299.7	1196.60530	1503.17170	-0.32910	2.24170	1.41870	K562	MATR3
ZC3H7A	ENSG00000122299.7	1126.19800	1401.29130	-0.31530	3.96120	3.00780	K562	MTPAP
ZC3H7A	ENSG00000122299.7	1022.42960	1323.20260	-0.37200	2.52370	1.72960	K562	PCBP3
ZC3H7A	ENSG00000122299.7	767.33810	1014.96000	-0.40350	3.82740	2.87860	K562	POLR2G
ZC3H7A	ENSG00000122299.7	1189.49540	1485.67170	-0.32080	2.44120	1.67360	K562	PPIG
ZC3H7A	ENSG00000122299.7	2358.67870	2820.99420	-0.25820	2.06900	1.36350	K562	PUF60
ZC3H7A	ENSG00000122299.7	3276.50340	2085.17540	0.65190	9.03810	8.10590	K562	PUS1
ZC3H7A	ENSG00000122299.7	2431.08930	2031.71150	0.25880	2.65100	2.06930	K562	RBM15
ZC3H7A	ENSG00000122299.7	663.31220	886.59070	-0.41860	3.54140	2.42180	K562	RCC2
ZC3H7A	ENSG00000122299.7	1175.63470	1536.30690	-0.38600	4.78430	3.73700	K562	SF3A3
ZC3H7A	ENSG00000122299.7	888.40240	1164.59410	-0.39050	2.47130	1.55560	K562	SF3B1
ZC3H7A	ENSG00000122299.7	852.18100	1454.67370	-0.77150	14.03700	11.99760	K562	SF3B4
ZC3H7A	ENSG00000122299.7	1038.81620	1336.42470	-0.36340	3.12580	1.99040	K562	SRSF4
ZC3H7A	ENSG00000122299.7	1123.01530	1451.86790	-0.37050	2.57620	1.89170	K562	TARDBP
ZC3H7A	ENSG00000122299.7	2116.74080	1650.90890	0.35850	5.74210	4.74980	K562	UPF1
ZC3H7A	ENSG00000122299.7	1929.56690	1468.94830	0.39340	7.14680	5.84570	K562	WDR43
Gene Name	Gene ID	KDMean	CNMean	log2(fold change)	-log(pval)	-log(padj)	Cell Line	Affected by RBP	Bound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

The Knockdown/knockout RNA-Seq assay for ZC3H7A is not available on ENCORE database.

20 RBPs can affect the splicing of ZC3H7A :

Event Type	Gene Name	Gene ID	chr	Strand	ExonStart	ExonEnd	2ndExonStart	2ndExonEnd	upstreamES	upstreamEE	downstreamES	downstreamEE	dPSI	p-value	FDR	is_included	Cell Line	Affected by RBP
SE	ZC3H7A	ENSG00000122299.7	chr16	-	11862886	11862951			11862170	11862357	11864638	11864843	-0.38200	0.00004	0.00145	excluded	K562	SF3B4
SE	ZC3H7A	ENSG00000122299.7	chr16	-	11856526	11856603			11855765	11855899	11857333	11857515	-0.26000	0.00001	0.00030	excluded	K562	SF3B4
SE	ZC3H7A	ENSG00000122299.7	chr16	-	11855261	11855367			11852286	11852395	11855765	11855899	-0.32500	0.00001	0.00041	excluded	K562	SF3B4
SE	ZC3H7A	ENSG00000122299.7	chr16	-	11856526	11856603			11855765	11855899	11857333	11857515	-0.18000	0.00170	0.05524	excluded	K562	PRPF8
SE	ZC3H7A	ENSG00000122299.7	chr16	-	11870175	11870214			11868835	11868869	11870307	11870388	-0.17300	0.00001	0.00052	excluded	HepG2	U2AF1
SE	ZC3H7A	ENSG00000122299.7	chr16	-	11862886	11862951			11862170	11862357	11864638	11864843	-0.14300	0.00096	0.03048	excluded	K562	AKAP8L
SE	ZC3H7A	ENSG00000122299.7	chr16	-	11856526	11856603			11855765	11855899	11857333	11857515	-0.11700	0.00001	0.00087	excluded	K562	AKAP8L
SE	ZC3H7A	ENSG00000122299.7	chr16	-	11870175	11870214			11868835	11868869	11870307	11870388	-0.06100	0.00063	0.02186	excluded	K562	AKAP8L
SE	ZC3H7A	ENSG00000122299.7	chr16	-	11870175	11870214			11868835	11868869	11870307	11870388	-0.19200	0.00000	0.00000	excluded	HepG2	U2AF2
SE	ZC3H7A	ENSG00000122299.7	chr16	-	11864638	11864843			11862170	11862357	11868091	11868375	-0.18300	0.00001	0.00023	excluded	HepG2	U2AF2
SE	ZC3H7A	ENSG00000122299.7	chr16	-	11856526	11856603			11855765	11855899	11857333	11857548	-0.34300	0.00000	0.00000	excluded	K562	AQR
SE	ZC3H7A	ENSG00000122299.7	chr16	-	11855261	11855367			11852286	11852395	11855765	11855899	-0.44700	0.00000	0.00000	excluded	K562	AQR
SE	ZC3H7A	ENSG00000122299.7	chr16	-	11875280	11875320			11873095	11873219	11876142	11876244	-0.05800	0.01300	0.09993	excluded	K562	AQR
SE	ZC3H7A	ENSG00000122299.7	chr16	-	11862886	11862951			11862170	11862357	11864638	11864843	-0.48900	0.00000	0.00000	excluded	K562	AQR
SE	ZC3H7A	ENSG00000122299.7	chr16	-	11868835	11868869			11868091	11868375	11870307	11870429	-0.05800	0.00907	0.07514	excluded	K562	AQR
SE	ZC3H7A	ENSG00000122299.7	chr16	-	11870175	11870214			11868835	11868869	11870307	11870388	0.06300	0.00067	0.06046	included	HepG2	SRSF7
SE	ZC3H7A	ENSG00000122299.7	chr16	-	11870175	11870214			11868835	11868869	11870307	11870388	-0.20700	0.00033	0.06647	excluded	HepG2	UCHL5
SE	ZC3H7A	ENSG00000122299.7	chr16	-	11862886	11862951			11862170	11862357	11864638	11864843	-0.32600	0.00000	0.00000	excluded	K562	PUS1
SE	ZC3H7A	ENSG00000122299.7	chr16	-	11856526	11856603			11855765	11855899	11857333	11857515	-0.20300	0.00000	0.00000	excluded	K562	PUS1
SE	ZC3H7A	ENSG00000122299.7	chr16	-	11870175	11870214			11868835	11868869	11870307	11870388	-0.07600	0.00004	0.00109	excluded	K562	PUS1
SE	ZC3H7A	ENSG00000122299.7	chr16	-	11855261	11855367			11852286	11852395	11855765	11855899	-0.05700	0.00801	0.08875	excluded	K562	PUS1
SE	ZC3H7A	ENSG00000122299.7	chr16	-	11856526	11856603			11855765	11855899	11857333	11857515	-0.16200	0.00033	0.00910	excluded	K562	U2AF1
SE	ZC3H7A	ENSG00000122299.7	chr16	-	11855323	11855367			11852286	11852395	11855765	11855899	-0.23400	0.00022	0.03262	excluded	HepG2	PCBP2
SE	ZC3H7A	ENSG00000122299.7	chr16	-	11870175	11870233			11868835	11868869	11870307	11870388	-0.16200	0.00151	0.08960	excluded	HepG2	HNRNPL
SE	ZC3H7A	ENSG00000122299.7	chr16	-	11862886	11862951			11862170	11862357	11864638	11864843	-0.35000	0.00000	0.00000	excluded	HepG2	SF3A3
SE	ZC3H7A	ENSG00000122299.7	chr16	-	11856526	11856603			11855765	11855899	11857333	11857515	-0.12400	0.00000	0.00025	excluded	HepG2	SF3A3
SE	ZC3H7A	ENSG00000122299.7	chr16	-	11870175	11870214			11868835	11868869	11870307	11870388	-0.12300	0.00006	0.00310	excluded	HepG2	SF3A3
SE	ZC3H7A	ENSG00000122299.7	chr16	-	11855261	11855367			11852286	11852395	11855765	11855899	-0.35800	0.00000	0.00000	excluded	HepG2	SF3A3
SE	ZC3H7A	ENSG00000122299.7	chr16	-	11890074	11890271			11876142	11876244	11890979	11891102	-0.32800	0.00001	0.00276	excluded	K562	HNRNPUL1
SE	ZC3H7A	ENSG00000122299.7	chr16	-	11855261	11855367			11852286	11852395	11855765	11855899	-0.18700	0.00000	0.00017	excluded	HepG2	SF3B4
SE	ZC3H7A	ENSG00000122299.7	chr16	-	11862886	11862951			11862170	11862357	11864638	11864843	-0.14200	0.00072	0.02674	excluded	K562	UTP18
SE	ZC3H7A	ENSG00000122299.7	chr16	-	11856526	11856603			11855765	11855899	11857333	11857515	-0.11800	0.00002	0.00136	excluded	K562	UTP18
SE	ZC3H7A	ENSG00000122299.7	chr16	-	11870175	11870214			11868835	11868869	11870307	11870388	-0.05200	0.00139	0.04376	excluded	K562	UTP18
SE	ZC3H7A	ENSG00000122299.7	chr16	-	11862886	11862951			11862170	11862357	11864638	11864843	-0.26600	0.00032	0.00769	excluded	K562	U2AF2
SE	ZC3H7A	ENSG00000122299.7	chr16	-	11856526	11856603			11855765	11855899	11857333	11857515	-0.15500	0.00061	0.01320	excluded	K562	U2AF2
SE	ZC3H7A	ENSG00000122299.7	chr16	-	11856526	11856603			11855765	11855899	11857333	11857515	-0.14700	0.00024	0.01226	excluded	K562	TARDBP
SE	ZC3H7A	ENSG00000122299.7	chr16	-	11862886	11862951			11862170	11862357	11864638	11864843	-0.16800	0.00336	0.06784	excluded	K562	RBM15
SE	ZC3H7A	ENSG00000122299.7	chr16	-	11856526	11856603			11855765	11855899	11857333	11857515	-0.08600	0.00074	0.02172	excluded	K562	RBM15
SE	ZC3H7A	ENSG00000122299.7	chr16	-	11856526	11856603			11855765	11855899	11857333	11857515	-0.06400	0.00329	0.06811	excluded	K562	AGGF1
SE	ZC3H7A	ENSG00000122299.7	chr16	-	11856526	11856603			11855765	11855899	11857333	11857515	-0.09500	0.00237	0.07767	excluded	K562	SF3B1
SE	ZC3H7A	ENSG00000122299.7	chr16	-	11870175	11870214			11868835	11868869	11870307	11870388	-0.07400	0.00039	0.01939	excluded	K562	SF3B1
SE	ZC3H7A	ENSG00000122299.7	chr16	-	11855261	11855367			11852286	11852395	11855765	11855899	-0.24500	0.00000	0.00011	excluded	K562	SF3B1
SE	ZC3H7A	ENSG00000122299.7	chr16	-	11870175	11870214			11868835	11868869	11870307	11870388	0.11900	0.00000	0.00028	included	HepG2	HNRNPC
SE	ZC3H7A	ENSG00000122299.7	chr16	-	11890074	11890271			11876142	11876244	11890979	11891102	-0.33000	0.00013	0.03244	excluded	K562	NPM1
SE	ZC3H7A	ENSG00000122299.7	chr16	-	11869262	11869338			11868835	11868869	11870175	11870214	0.13900	0.00000	0.00001	included	K562	HNRNPC
A3SS	ZC3H7A	ENSG00000122299.7	chr16	-	11873117	11873248			11873117	11873219	11875280	11875457	0.10500	0.00005	0.00048	longer	K562	AQR
A3SS	ZC3H7A	ENSG00000122299.7	chr16	-	11856526	11856700			11856526	11856603	11857333	11857515	0.16800	0.00000	0.00000	longer	K562	AQR
A3SS	ZC3H7A	ENSG00000122299.7	chr16	-	11855765	11855964			11855765	11855899	11856526	11856603	0.13700	0.00000	0.00001	longer	K562	AQR
A3SS	ZC3H7A	ENSG00000122299.7	chr16	-	11850092	11850339			11850092	11850226	11852286	11852435	0.22600	0.00000	0.00000	longer	K562	AQR
A3SS	ZC3H7A	ENSG00000122299.7	chr16	-	11857333	11857548			11857333	11857515	11858908	11859009	0.06600	0.00099	0.00688	longer	K562	AQR
A3SS	ZC3H7A	ENSG00000122299.7	chr16	-	11861272	11861458			11861272	11861434	11862170	11862414	0.07900	0.00000	0.00001	longer	K562	AQR
A3SS	ZC3H7A	ENSG00000122299.7	chr16	-	11862886	11862968			11862886	11862951	11864638	11864843	0.05900	0.00413	0.02445	longer	K562	AQR
A3SS	ZC3H7A	ENSG00000122299.7	chr16	-	11868835	11868943			11868835	11868869	11870307	11870429	-0.40800	0.00142	0.00953	shorter	K562	AQR
A3SS	ZC3H7A	ENSG00000122299.7	chr16	-	11856526	11856661			11856526	11856624	11857333	11857515	-0.72700	0.01879	0.09039	shorter	K562	AQR
A3SS	ZC3H7A	ENSG00000122299.7	chr16	-	11856526	11856715			11856526	11856603	11857333	11857515	0.11800	0.00000	0.00007	longer	K562	PUS1
A5SS	ZC3H7A	ENSG00000122299.7	chr16	-	11856405	11856637			11856526	11856637	11855771	11855899	0.09700	0.00000	0.00000	longer	K562	AQR
A5SS	ZC3H7A	ENSG00000122299.7	chr16	-	11855261	11855367			11855323	11855367	11852286	11852395	-0.20900	0.00000	0.00001	shorter	K562	AQR
A5SS	ZC3H7A	ENSG00000122299.7	chr16	-	11855261	11855367			11855323	11855367	11852286	11852395	0.17100	0.00003	0.01512	longer	HepG2	HNRNPUL1
MXE	ZC3H7A	ENSG00000122299.7	chr16	-	11856526	11856624	11857333	11857548	11855771	11855899	11859344	11859541	0.37300	0.00000	0.00000	1included	K562	AQR
MXE	ZC3H7A	ENSG00000122299.7	chr16	-	11870606	11870765	11873021	11873248	11870307	11870388	11875280	11875320	0.10200	0.00025	0.00271	1included	K562	AQR
MXE	ZC3H7A	ENSG00000122299.7	chr16	-	11870307	11870388	11870606	11870765	11868091	11868375	11873021	11873219	-0.06000	0.00215	0.01772	2included	K562	AQR
MXE	ZC3H7A	ENSG00000122299.7	chr16	-	11855765	11855964	11857333	11857515	11852286	11852395	11858908	11859009	-0.37600	0.00000	0.00000	2included	K562	AQR

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

ZC3H7A

General Information

Functions

Localization

Domains (AlphaFold: ZC3H7A)

Antibody Validation

Expression Level in Cell lines

Assays

RNA Targets

Proteins bound to RNA

eCLIP assay for ZC3H7A is not avaliable on ENCORE database.

27 proteins are bound to ZC3H7A RNA:

eCLIP assay for ZC3H7A is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout RNA-Seq assay for ZC3H7A is not available on ENCORE database.

63 RBPs can affect the gene expression of ZC3H7A :

The Knockdown/knockout RNA-Seq assay for ZC3H7A is not available on ENCORE database.

20 RBPs can affect the splicing of ZC3H7A :

The Knockdown/knockout RNA-Seq assay for ZC3H7A is not avaliable on ENCORE database.