RBP | Antibody Info | Primary-HepG2 | Secondary-HepG2 | Primary-K562 | Secondary-K562 | Primary-UBERON | Primary-Hela |
---|
Chr | Start | End | Strand | Matched Area | log2(fold change) | -log(p-value) | Cell Line | Binding Protein Name |
---|---|---|---|---|---|---|---|---|
chr2 | 64195843 | 64195885 | - | intron-Distal | 4.89022 | 51.86246 | HepG2 | PTBP1 |
chr2 | 64199299 | 64199349 | - | CDS,intron-Distal,intron-Proximal | 3.58287 | 31.38634 | HepG2 | BCLAF1 |
chr2 | 64196092 | 64196125 | - | CDS,intron-Distal | 3.61979 | 25.48604 | HepG2 | BCLAF1 |
chr2 | 64169639 | 64169669 | - | CDS,intron-Distal | 4.40944 | 23.30628 | HepG2 | BCLAF1 |
chr2 | 64195885 | 64195922 | - | intron-Distal | 4.54302 | 22.65103 | HepG2 | PTBP1 |
chr2 | 64169621 | 64169639 | - | CDS,intron-Distal | 4.02242 | 21.94873 | HepG2 | BCLAF1 |
chr2 | 64189153 | 64189223 | - | CDS,intron-Distal,intron-Proximal | 4.92189 | 20.15752 | HepG2 | PRPF8 |
chr2 | 64161088 | 64161125 | - | CDS,intron-Distal | 3.50737 | 18.76950 | HepG2 | BCLAF1 |
chr2 | 64165410 | 64165443 | - | intron-Distal | 3.87185 | 17.52415 | HepG2 | HNRNPL |
chr2 | 64162152 | 64162228 | - | intron-Distal | 4.38452 | 17.46638 | HepG2 | QKI |
Chr | Start | End | Strand | Matched Area | log2(fold change) | -log(p-value) | Cell Line | Binding Protein Name |
Gene Name | Gene ID | KDMean | CNMean | log2(fold change) * | -log(pval) ** | -log(padj) ** | Cell Line | Affected by RBP | Bound by RBP |
---|---|---|---|---|---|---|---|---|---|
VPS54 | ENSG00000143952.15 | 2158.13160 | 5591.55130 | -1.37350 | 89.98400 | 88.01100 | HepG2 | NELFE | |
VPS54 | ENSG00000143952.15 | 770.49720 | 2712.21460 | -1.81560 | 64.02100 | 61.77730 | HepG2 | HNRNPA1 | |
VPS54 | ENSG00000143952.15 | 2726.28080 | 5459.97100 | -1.00200 | 56.90890 | 55.37850 | HepG2 | SRSF1 | |
VPS54 | ENSG00000143952.15 | 2086.61270 | 4616.32330 | -1.14560 | 51.40250 | 49.71860 | HepG2 | RBM22 | |
VPS54 | ENSG00000143952.15 | 2477.28390 | 4526.91670 | -0.86980 | 39.97240 | 38.56230 | HepG2 | SSB | |
VPS54 | ENSG00000143952.15 | 1059.58260 | 2748.73880 | -1.37530 | 39.41780 | 37.31380 | HepG2 | DDX21 | |
VPS54 | ENSG00000143952.15 | 1060.35980 | 2667.90770 | -1.33120 | 31.32830 | 28.66020 | HepG2 | ADAR | |
VPS54 | ENSG00000143952.15 | 1935.73550 | 3112.36060 | -0.68510 | 28.78830 | 27.07550 | HepG2 | SMN1 | |
VPS54 | ENSG00000143952.15 | 1755.90730 | 3044.17080 | -0.79380 | 26.47290 | 24.91010 | HepG2 | DKC1 | |
VPS54 | ENSG00000143952.15 | 2964.17170 | 4598.83770 | -0.63360 | 26.36640 | 24.76880 | HepG2 | SUCLG1 | |
Gene Name | Gene ID | KDMean | CNMean | log2(fold change) | -log(pval) | -log(padj) | Cell Line | Affected by RBP | Bound by RBP |
*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".
Event Type | Gene Name | Gene ID | chr | Strand | ExonStart | ExonEnd | 2ndExonStart | 2ndExonEnd | upstreamES | upstreamEE | downstreamES | downstreamEE | dPSI | p-value | FDR | is_included | Cell Line | Affected by RBP | Bound by RBP |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
SE | VPS54 | ENSG00000143952.15 | chr2 | - | 64140356 | 64140444 | 64139673 | 64139795 | 64141315 | 64141421 | -0.07300 | 0.00000 | 0.00071 | excluded | HepG2 | NCBP2 | |||
SE | VPS54 | ENSG00000143952.15 | chr2 | - | 64140958 | 64141059 | 64140356 | 64140444 | 64141315 | 64141421 | 0.17000 | 0.00000 | 0.00033 | included | HepG2 | HNRNPU | |||
A3SS | VPS54 | ENSG00000143952.15 | chr2 | - | 64208779 | 64209021 | 64208779 | 64208985 | 64210997 | 64211153 | -0.28100 | 0.00000 | 0.00000 | shorter | HepG2 | HNRNPU | |||
A3SS | VPS54 | ENSG00000143952.15 | chr2 | - | 64208779 | 64209021 | 64208779 | 64208985 | 64210997 | 64211153 | -0.17700 | 0.00000 | 0.00194 | shorter | HepG2 | NKRF | |||
A3SS | VPS54 | ENSG00000143952.15 | chr2 | - | 64208779 | 64209021 | 64208779 | 64208985 | 64210997 | 64211153 | -0.27700 | 0.00000 | 0.00000 | shorter | HepG2 | AKAP1 | |||
A3SS | VPS54 | ENSG00000143952.15 | chr2 | - | 64208779 | 64209021 | 64208779 | 64208985 | 64210997 | 64211153 | -0.23500 | 0.00000 | 0.00015 | shorter | HepG2 | MATR3 | |||
A3SS | VPS54 | ENSG00000143952.15 | chr2 | - | 64208779 | 64209021 | 64208779 | 64208985 | 64210997 | 64211153 | -0.39600 | 0.00000 | 0.00005 | shorter | K562 | U2AF2 | |||
A3SS | VPS54 | ENSG00000143952.15 | chr2 | - | 64208779 | 64209021 | 64208779 | 64208985 | 64210997 | 64211153 | -0.40800 | 0.00000 | 0.00000 | shorter | HepG2 | U2AF2 | |||
A3SS | VPS54 | ENSG00000143952.15 | chr2 | - | 64208779 | 64209021 | 64208779 | 64208985 | 64210997 | 64211153 | -0.29700 | 0.00000 | 0.00000 | shorter | HepG2 | TIAL1 | |||
A3SS | VPS54 | ENSG00000143952.15 | chr2 | - | 64208779 | 64209021 | 64208779 | 64208985 | 64210997 | 64211153 | -0.20100 | 0.00000 | 0.00340 | shorter | HepG2 | PCBP2 |
*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".