| RBP | Antibody Info | Primary-HepG2 | Secondary-HepG2 | Primary-K562 | Secondary-K562 | Primary-UBERON | Primary-Hela |
|---|
| Chr | Start | End | Strand | Matched Area | log2(fold change) | -log(p-value) | Cell Line | Binding Protein Name |
|---|---|---|---|---|---|---|---|---|
| chr19 | 41838107 | 41838155 | - | CDS,intron-Distal | 4.53232 | 82.85968 | K562 | PUM2 |
| chr19 | 41859654 | 41859713 | - | 5'-UTR,intron-Distal | 7.26648 | 67.80981 | HepG2 | DDX3X |
| chr19 | 41859445 | 41859527 | - | 5'-UTR,intron-Distal | 5.30586 | 61.52767 | HepG2 | DDX3X |
| chr19 | 41836843 | 41836877 | - | 3'-UTR,intron-Distal | 5.31409 | 61.32355 | K562 | PABPC4 |
| chr19 | 41859591 | 41859654 | - | 5'-UTR,intron-Distal | 6.78377 | 60.03866 | HepG2 | DDX3X |
| chr19 | 41859713 | 41859781 | - | 5'-UTR,intron-Distal | 5.60695 | 38.89825 | HepG2 | DDX3X |
| chr19 | 41859658 | 41859714 | - | 5'-UTR,intron-Distal | 5.58248 | 38.01240 | K562 | DDX3X |
| chr19 | 41859561 | 41859658 | - | 5'-UTR,intron-Distal | 5.03538 | 36.14422 | K562 | DDX3X |
| chr19 | 41859544 | 41859591 | - | 5'-UTR,intron-Distal | 6.03529 | 31.60482 | HepG2 | DDX3X |
| chr19 | 41838155 | 41838187 | - | CDS,intron-Distal,intron-Proximal | 3.71862 | 31.36005 | K562 | PUM2 |
| Chr | Start | End | Strand | Matched Area | log2(fold change) | -log(p-value) | Cell Line | Binding Protein Name |
| Gene Name | Gene ID | KDMean | CNMean | log2(fold change) * | -log(pval) ** | -log(padj) ** | Cell Line | Affected by RBP | Bound by RBP |
|---|---|---|---|---|---|---|---|---|---|
| TGFB1 | ENSG00000105329.5 | 2263.45560 | 666.11280 | 1.76460 | 106.76810 | 104.41540 | HepG2 | SRSF9 | |
| TGFB1 | ENSG00000105329.5 | 7155.39580 | 2985.12590 | 1.26110 | 88.23360 | 85.18060 | K562 | AGGF1 | |
| TGFB1 | ENSG00000105329.5 | 4161.73460 | 687.48290 | 2.59770 | 83.92150 | 81.30830 | HepG2 | DDX6 | |
| TGFB1 | ENSG00000105329.5 | 2405.49640 | 644.62260 | 1.89970 | 69.82870 | 67.55990 | HepG2 | TRIM56 | |
| TGFB1 | ENSG00000105329.5 | 244.14340 | 936.14620 | -1.93900 | 63.99660 | 62.34840 | HepG2 | SSB | |
| TGFB1 | ENSG00000105329.5 | 2213.81730 | 1044.23980 | 1.08400 | 45.77150 | 44.04970 | HepG2 | ACO1 | |
| TGFB1 | ENSG00000105329.5 | 4274.31620 | 795.20030 | 2.42620 | 42.70070 | 39.64010 | HepG2 | PABPC1 | |
| TGFB1 | ENSG00000105329.5 | 6211.58220 | 3001.43780 | 1.04920 | 39.07960 | 36.76620 | K562 | RBM15 | |
| TGFB1 | ENSG00000105329.5 | 2582.27700 | 1393.73490 | 0.88960 | 34.40100 | 32.50970 | HepG2 | UPF1 | |
| TGFB1 | ENSG00000105329.5 | 2159.19840 | 692.60720 | 1.64030 | 29.67110 | 27.64440 | HepG2 | HNRNPK | |
| Gene Name | Gene ID | KDMean | CNMean | log2(fold change) | -log(pval) | -log(padj) | Cell Line | Affected by RBP | Bound by RBP |
*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".
| Event Type | Gene Name | Gene ID | chr | Strand | ExonStart | ExonEnd | 2ndExonStart | 2ndExonEnd | upstreamES | upstreamEE | downstreamES | downstreamEE | dPSI | p-value | FDR | is_included | Cell Line | Affected by RBP | Bound by RBP |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| A3SS | TGFB1 | ENSG00000105329.5 | chr19 | - | 41847787 | 41847981 | 41847787 | 41847935 | 41848074 | 41848152 | 0.07200 | 0.00000 | 0.00000 | longer | K562 | AQR | |||
| MXE | TGFB1 | ENSG00000105329.5 | chr19 | - | 41850651 | 41850769 | 41854199 | 41854360 | 41848074 | 41848152 | 41858594 | 41859816 | -0.11900 | 0.00232 | 0.06734 | 2included | K562 | LIN28B |
*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".