RBP | Antibody Info | Primary-HepG2 | Secondary-HepG2 | Primary-K562 | Secondary-K562 | Primary-UBERON | Primary-Hela |
---|
Chr | Start | End | Strand | Matched Area | log2(fold change) | -log(p-value) | Cell Line | Binding Protein Name |
---|---|---|---|---|---|---|---|---|
chr2 | 86719337 | 86719396 | + | 3'-UTR | 6.13653 | 78.29263 | K562 | PUM2 |
chr2 | 86716591 | 86716650 | + | 3'-UTR,CDS,intron-Proximal | 6.15089 | 39.02525 | K562 | SF3B4 |
chr2 | 86719396 | 86719425 | + | 3'-UTR | 5.46060 | 29.25937 | K562 | PUM2 |
chr2 | 86716448 | 86716565 | + | 3'-UTR,CDS,intron-Proximal | 3.41974 | 20.65922 | HepG2 | BCLAF1 |
chr2 | 86691124 | 86691168 | + | intron-Proximal | 5.29818 | 19.10916 | K562 | SF3B4 |
chr2 | 86716605 | 86716665 | + | 3'-UTR,CDS,intron-Proximal | 3.57633 | 18.85322 | K562 | EFTUD2 |
chr2 | 86719425 | 86719473 | + | 3'-UTR | 4.44355 | 18.85164 | K562 | PUM2 |
chr2 | 86716744 | 86716785 | + | 3'-UTR,CDS,intron-Proximal | 6.27188 | 18.15906 | HepG2 | BCLAF1 |
chr2 | 86716568 | 86716605 | + | intron-Proximal | 5.71306 | 17.70008 | K562 | EFTUD2 |
chr2 | 86719495 | 86719662 | + | 3'-UTR | 4.16609 | 17.54430 | K562 | IGF2BP1 |
Chr | Start | End | Strand | Matched Area | log2(fold change) | -log(p-value) | Cell Line | Binding Protein Name |
Gene Name | Gene ID | KDMean | CNMean | log2(fold change) * | -log(pval) ** | -log(padj) ** | Cell Line | Affected by RBP | Bound by RBP |
---|---|---|---|---|---|---|---|---|---|
KDM3A | ENSG00000115548.12 | 1960.68760 | 4232.70570 | -1.11020 | 78.07870 | 75.85250 | HepG2 | PUM1 | |
KDM3A | ENSG00000115548.12 | 1018.94940 | 2850.81760 | -1.48430 | 55.76370 | 52.95890 | K562 | SYNCRIP | |
KDM3A | ENSG00000115548.12 | 923.88240 | 2532.50450 | -1.45480 | 44.76800 | 41.62780 | K562 | SAFB | |
KDM3A | ENSG00000115548.12 | 1401.12010 | 3119.95050 | -1.15490 | 38.46260 | 36.99490 | HepG2 | TIAL1 | |
KDM3A | ENSG00000115548.12 | 6118.52150 | 3096.00820 | 0.98270 | 38.88340 | 36.57360 | K562 | RBM15 | |
KDM3A | ENSG00000115548.12 | 7589.91430 | 3177.10130 | 1.25630 | 36.16120 | 34.13220 | K562 | PUS1 | |
KDM3A | ENSG00000115548.12 | 1978.35640 | 3334.60100 | -0.75320 | 35.56750 | 33.70880 | HepG2 | SMN1 | |
KDM3A | ENSG00000115548.12 | 6841.64410 | 3204.09790 | 1.09430 | 31.31050 | 28.68330 | K562 | AKAP8L | |
KDM3A | ENSG00000115548.12 | 1921.73140 | 4023.25770 | -1.06600 | 27.41780 | 25.42390 | K562 | PTBP1 | |
KDM3A | ENSG00000115548.12 | 5264.53070 | 3355.43850 | 0.64970 | 26.50030 | 25.36230 | HepG2 | SRFBP1 | |
Gene Name | Gene ID | KDMean | CNMean | log2(fold change) | -log(pval) | -log(padj) | Cell Line | Affected by RBP | Bound by RBP |
*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".
Event Type | Gene Name | Gene ID | chr | Strand | ExonStart | ExonEnd | 2ndExonStart | 2ndExonEnd | upstreamES | upstreamEE | downstreamES | downstreamEE | dPSI | p-value | FDR | is_included | Cell Line | Affected by RBP | Bound by RBP |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
SE | KDM3A | ENSG00000115548.12 | chr2 | + | 86687901 | 86687954 | 86684105 | 86684194 | 86691175 | 86691339 | 0.25100 | 0.00000 | 0.00013 | included | HepG2 | HNRNPM | |||
A3SS | KDM3A | ENSG00000115548.12 | chr2 | + | 86705705 | 86705858 | 86705730 | 86705858 | 86705292 | 86705388 | 0.19600 | 0.00000 | 0.00000 | longer | K562 | AQR | |||
RI | KDM3A | ENSG00000115548.12 | chr2 | + | 86709580 | 86711281 | 86709580 | 86709817 | 86711109 | 86711281 | 0.14700 | 0.00000 | 0.00000 | included | K562 | PUS1 | |||
RI | KDM3A | ENSG00000115548.12 | chr2 | + | 86704999 | 86705388 | 86704999 | 86705152 | 86705292 | 86705388 | 0.08700 | 0.00000 | 0.00000 | included | K562 | PUS1 | |||
RI | KDM3A | ENSG00000115548.12 | chr2 | + | 86718263 | 86719839 | 86718263 | 86718398 | 86719161 | 86719839 | 0.05400 | 0.00000 | 0.00001 | included | K562 | PUS1 | |||
RI | KDM3A | ENSG00000115548.12 | chr2 | + | 86716642 | 86718180 | 86716642 | 86716782 | 86718003 | 86718180 | 0.11000 | 0.00000 | 0.00000 | included | K562 | PUS1 | |||
RI | KDM3A | ENSG00000115548.12 | chr2 | + | 86709580 | 86711281 | 86709580 | 86709817 | 86711109 | 86711281 | 0.25800 | 0.00000 | 0.00000 | included | HepG2 | U2AF2 | |||
RI | KDM3A | ENSG00000115548.12 | chr2 | + | 86718263 | 86719839 | 86718263 | 86718398 | 86719161 | 86719839 | 0.06400 | 0.00000 | 0.00001 | included | K562 | AGGF1 | |||
RI | KDM3A | ENSG00000115548.12 | chr2 | + | 86704999 | 86705388 | 86704999 | 86705152 | 86705292 | 86705388 | 0.06100 | 0.00000 | 0.00002 | included | K562 | AGGF1 | |||
RI | KDM3A | ENSG00000115548.12 | chr2 | + | 86704999 | 86705388 | 86704999 | 86705152 | 86705292 | 86705388 | 0.06000 | 0.00000 | 0.00002 | included | K562 | AKAP8L |
*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".